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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_K21
         (847 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084153-6|AAK84594.1|  568|Caenorhabditis elegans Heat shock pr...   159   3e-39
L36035-1|AAA28077.1|  568|Caenorhabditis elegans HSP60 protein.       153   1e-37
Z35599-3|CAA84660.1|  542|Caenorhabditis elegans Hypothetical pr...    53   2e-07
Z32840-7|CAA83681.1|  542|Caenorhabditis elegans Hypothetical pr...    53   2e-07
U25698-1|AAA92843.1|  542|Caenorhabditis elegans CCT-5 protein.        53   2e-07
Z68318-10|CAA92697.1|  529|Caenorhabditis elegans Hypothetical p...    52   4e-07
U25632-1|AAA93233.1|  529|Caenorhabditis elegans CCT-2 protein.        52   4e-07
AL031268-2|CAA20331.1|  529|Caenorhabditis elegans Hypothetical ...    52   4e-07
Z66500-12|CAA91308.1|  549|Caenorhabditis elegans Hypothetical p...    47   1e-05
U07941-1|AAB05072.1|  549|Caenorhabditis elegans CCT-1 protein.        47   1e-05
Z49068-8|CAA88861.1|  540|Caenorhabditis elegans Hypothetical pr...    42   7e-04
U25697-1|AAA92842.1|  540|Caenorhabditis elegans CCT-4 protein.        42   7e-04
AF067947-11|AAO25994.1|  455|Caenorhabditis elegans Hypothetical...    37   0.021
AF067947-10|AAC19232.2|  535|Caenorhabditis elegans Hypothetical...    37   0.021
U13070-3|AAM22058.1|  429|Caenorhabditis elegans Chaperonin cont...    32   0.59 
U13070-2|AAC46642.1|  539|Caenorhabditis elegans Chaperonin cont...    32   0.59 
AC024136-4|AAF35963.3|  543|Caenorhabditis elegans Hypothetical ...    31   0.78 
AC024201-2|AAK82924.1|  556|Caenorhabditis elegans Abnormal cell...    28   7.3  
Z72504-5|CAA96602.2|  812|Caenorhabditis elegans Hypothetical pr...    28   9.6  
Z72504-4|CAH60755.1|  653|Caenorhabditis elegans Hypothetical pr...    28   9.6  
X91045-1|CAA62505.1|  693|Caenorhabditis elegans let-653 protein.      28   9.6  

>AC084153-6|AAK84594.1|  568|Caenorhabditis elegans Heat shock
           protein protein 60 protein.
          Length = 568

 Score =  159 bits (385), Expect = 3e-39
 Identities = 79/110 (71%), Positives = 90/110 (81%)
 Frame = +3

Query: 378 GPRKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGF 557
           G  KITKDGVTVAK ++LKDK+QN+GAKL+Q+VAN  NEEAGDGTT ATVLARAIAKEGF
Sbjct: 60  GSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANEEAGDGTTCATVLARAIAKEGF 119

Query: 558 EKISKGANPIEIXXGVMLAVXAVKEKLKGMXKXVTTPEKIAQVATISANG 707
           E I +G N +EI  GVM AV  V  +LK + K VTTPE+IAQVATISANG
Sbjct: 120 ESIRQGGNAVEIRRGVMNAVEVVVAELKKISKKVTTPEEIAQVATISANG 169



 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 45/70 (64%), Positives = 52/70 (74%)
 Frame = +2

Query: 179 MLRLPRVVRQTVSLHKSYQLSRFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNV 358
           MLRL R   QT  +       R YAKDV+FGA+ R  ML GV++LADAV+VTMGPKGRNV
Sbjct: 1   MLRLARKGLQTAVV-------RSYAKDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNV 53

Query: 359 ILEQSWGSPK 388
           I+EQSWGSPK
Sbjct: 54  IIEQSWGSPK 63



 Score = 29.5 bits (63), Expect = 3.1
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 706 GXTAIGKLXADAMKKVGRDGL 768
           G T +G L +DAMKKVG  G+
Sbjct: 169 GDTVVGNLISDAMKKVGTTGV 189


>L36035-1|AAA28077.1|  568|Caenorhabditis elegans HSP60 protein.
          Length = 568

 Score =  153 bits (372), Expect = 1e-37
 Identities = 77/110 (70%), Positives = 88/110 (80%)
 Frame = +3

Query: 378 GPRKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGF 557
           G  KITKDGVTVAK ++LKDK+QN+GAKL+Q+VAN  NEEAGDGTT ATVL RAIAKEGF
Sbjct: 60  GSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANEEAGDGTTCATVLTRAIAKEGF 119

Query: 558 EKISKGANPIEIXXGVMLAVXAVKEKLKGMXKXVTTPEKIAQVATISANG 707
           E+ S   N +EI  GVM AV  V  +LK + K VTTPE+IAQVATISANG
Sbjct: 120 ERHSSRGNAVEIRRGVMNAVEVVVAELKKISKKVTTPEEIAQVATISANG 169



 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 45/70 (64%), Positives = 52/70 (74%)
 Frame = +2

Query: 179 MLRLPRVVRQTVSLHKSYQLSRFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNV 358
           MLRL R   QT  +       R YAKDV+FGA+ R  ML GV++LADAV+VTMGPKGRNV
Sbjct: 1   MLRLARKGLQTAVV-------RSYAKDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNV 53

Query: 359 ILEQSWGSPK 388
           I+EQSWGSPK
Sbjct: 54  IIEQSWGSPK 63



 Score = 29.5 bits (63), Expect = 3.1
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 706 GXTAIGKLXADAMKKVGRDGL 768
           G T +G L +DAMKKVG  G+
Sbjct: 169 GDTVVGNLISDAMKKVGTTGV 189


>Z35599-3|CAA84660.1|  542|Caenorhabditis elegans Hypothetical
           protein C07G2.3a protein.
          Length = 542

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
 Frame = +3

Query: 378 GPRKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGF 557
           G   IT DG T+ + +++    Q+  AKL+  ++ + + E GDGTT   VLA A+ +E  
Sbjct: 67  GDVTITNDGATIMEKMDV----QHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAE 122

Query: 558 EKISKGANPIEIXXGVMLAVXAVKEKLKGMXK--XVTTPEKIAQVATISANGGXGNR 722
           + I +G +PI+I  G  LA     E L  +     V   E++ + A  S      NR
Sbjct: 123 KLIDRGIHPIKIADGFDLACKKALETLDSISDKFPVENRERLVETAQTSLGSKIVNR 179


>Z32840-7|CAA83681.1|  542|Caenorhabditis elegans Hypothetical
           protein C07G2.3a protein.
          Length = 542

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
 Frame = +3

Query: 378 GPRKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGF 557
           G   IT DG T+ + +++    Q+  AKL+  ++ + + E GDGTT   VLA A+ +E  
Sbjct: 67  GDVTITNDGATIMEKMDV----QHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAE 122

Query: 558 EKISKGANPIEIXXGVMLAVXAVKEKLKGMXK--XVTTPEKIAQVATISANGGXGNR 722
           + I +G +PI+I  G  LA     E L  +     V   E++ + A  S      NR
Sbjct: 123 KLIDRGIHPIKIADGFDLACKKALETLDSISDKFPVENRERLVETAQTSLGSKIVNR 179


>U25698-1|AAA92843.1|  542|Caenorhabditis elegans CCT-5 protein.
          Length = 542

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
 Frame = +3

Query: 378 GPRKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGF 557
           G   IT DG T+ + +++    Q+  AKL+  ++ + + E GDGTT   VLA A+ +E  
Sbjct: 67  GDVTITNDGATIMEKMDV----QHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAE 122

Query: 558 EKISKGANPIEIXXGVMLAVXAVKEKLKGMXK--XVTTPEKIAQVATISANGGXGNR 722
           + I +G +PI+I  G  LA     E L  +     V   E++ + A  S      NR
Sbjct: 123 KLIDRGIHPIKIADGFDLACKKALETLDSISDKFPVENRERLVETAQTSLGSKIVNR 179


>Z68318-10|CAA92697.1|  529|Caenorhabditis elegans Hypothetical
           protein T21B10.7 protein.
          Length = 529

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 29/88 (32%), Positives = 48/88 (54%)
 Frame = +3

Query: 378 GPRKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGF 557
           G  K+T DG T+ K + +     N  AK++ +++   + E GDGTT+ TVLA  + KE  
Sbjct: 56  GGIKVTNDGATILKSIGV----DNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAE 111

Query: 558 EKISKGANPIEIXXGVMLAVXAVKEKLK 641
           + +++  +P  I  G   A+   +E LK
Sbjct: 112 KLVNQRIHPQTIISGYRRALGIAQESLK 139


>U25632-1|AAA93233.1|  529|Caenorhabditis elegans CCT-2 protein.
          Length = 529

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 29/88 (32%), Positives = 48/88 (54%)
 Frame = +3

Query: 378 GPRKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGF 557
           G  K+T DG T+ K + +     N  AK++ +++   + E GDGTT+ TVLA  + KE  
Sbjct: 56  GGIKVTNDGATILKSIGV----DNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAE 111

Query: 558 EKISKGANPIEIXXGVMLAVXAVKEKLK 641
           + +++  +P  I  G   A+   +E LK
Sbjct: 112 KLVNQRIHPQTIISGYRRALGIAQESLK 139


>AL031268-2|CAA20331.1|  529|Caenorhabditis elegans Hypothetical
           protein T21B10.7 protein.
          Length = 529

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 29/88 (32%), Positives = 48/88 (54%)
 Frame = +3

Query: 378 GPRKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGF 557
           G  K+T DG T+ K + +     N  AK++ +++   + E GDGTT+ TVLA  + KE  
Sbjct: 56  GGIKVTNDGATILKSIGV----DNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAE 111

Query: 558 EKISKGANPIEIXXGVMLAVXAVKEKLK 641
           + +++  +P  I  G   A+   +E LK
Sbjct: 112 KLVNQRIHPQTIISGYRRALGIAQESLK 139


>Z66500-12|CAA91308.1|  549|Caenorhabditis elegans Hypothetical
           protein T05C12.7 protein.
          Length = 549

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
 Frame = +3

Query: 390 ITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKIS 569
           +T DG T+ K +E+    ++   K++  +A   +EE GDGTT+  ++A  + K   E + 
Sbjct: 58  VTNDGATILKQLEV----EHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVK 113

Query: 570 KGANPIEIXXGVMLAVXAVKEKLKGMXKXVT-TPEKIAQVATISA 701
           +  +P  I  G  L   A KE +K + + ++ T + I + + ++A
Sbjct: 114 QKVHPTTIINGYRL---ACKEAVKYISENISFTSDSIGRQSVVNA 155


>U07941-1|AAB05072.1|  549|Caenorhabditis elegans CCT-1 protein.
          Length = 549

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
 Frame = +3

Query: 390 ITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKIS 569
           +T DG T+ K +E+    ++   K++  +A   +EE GDGTT+  ++A  + K   E + 
Sbjct: 58  VTNDGATILKQLEV----EHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVK 113

Query: 570 KGANPIEIXXGVMLAVXAVKEKLKGMXKXVT-TPEKIAQVATISA 701
           +  +P  I  G  L   A KE +K + + ++ T + I + + ++A
Sbjct: 114 QKVHPTTIINGYRL---ACKEAVKYISENISFTSDSIGRQSVVNA 155


>Z49068-8|CAA88861.1|  540|Caenorhabditis elegans Hypothetical
           protein K01C8.10 protein.
          Length = 540

 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
 Frame = +3

Query: 378 GPRKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGF 557
           G   IT DG T+   + +        AK++  ++   + EAGDGTTT  V+A A+     
Sbjct: 65  GDVTITNDGATILNQMSVIHPT----AKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQ 120

Query: 558 EKISKGANPIEIXXGVMLAVXAVKEKLKGMXKXV--TTPEKIAQVATISAN 704
             +SKG +P  I      A    ++ L  M   V  +    + ++AT S N
Sbjct: 121 NLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVDLSNDALLNKMATTSLN 171


>U25697-1|AAA92842.1|  540|Caenorhabditis elegans CCT-4 protein.
          Length = 540

 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
 Frame = +3

Query: 378 GPRKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGF 557
           G   IT DG T+   + +        AK++  ++   + EAGDGTTT  V+A A+     
Sbjct: 65  GDVTITNDGATILNQMSVIHPT----AKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQ 120

Query: 558 EKISKGANPIEIXXGVMLAVXAVKEKLKGMXKXV--TTPEKIAQVATISAN 704
             +SKG +P  I      A    ++ L  M   V  +    + ++AT S N
Sbjct: 121 NLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVDLSNDALLNKMATTSLN 171


>AF067947-11|AAO25994.1|  455|Caenorhabditis elegans Hypothetical
           protein T10B5.5b protein.
          Length = 455

 Score = 36.7 bits (81), Expect = 0.021
 Identities = 22/69 (31%), Positives = 35/69 (50%)
 Frame = +3

Query: 378 GPRKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGF 557
           G   I+ DG T+ K +++        A  + ++A + + E GDGTT+  VLA  I K+  
Sbjct: 54  GATTISNDGATILKLLDIVFP----AASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMK 109

Query: 558 EKISKGANP 584
             I  G +P
Sbjct: 110 PFIEDGVHP 118


>AF067947-10|AAC19232.2|  535|Caenorhabditis elegans Hypothetical
           protein T10B5.5a protein.
          Length = 535

 Score = 36.7 bits (81), Expect = 0.021
 Identities = 22/69 (31%), Positives = 35/69 (50%)
 Frame = +3

Query: 378 GPRKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGF 557
           G   I+ DG T+ K +++        A  + ++A + + E GDGTT+  VLA  I K+  
Sbjct: 54  GATTISNDGATILKLLDIVFP----AASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMK 109

Query: 558 EKISKGANP 584
             I  G +P
Sbjct: 110 PFIEDGVHP 118


>U13070-3|AAM22058.1|  429|Caenorhabditis elegans Chaperonin
           containing tcp-1 protein6, isoform b protein.
          Length = 429

 Score = 31.9 bits (69), Expect = 0.59
 Identities = 22/92 (23%), Positives = 41/92 (44%)
 Frame = +3

Query: 378 GPRKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGF 557
           G  K+TKDG  +   + +    Q+  A ++   +   ++  GDGTT+  +L   + K+  
Sbjct: 52  GDIKLTKDGNVLLHEMAI----QHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAE 107

Query: 558 EKISKGANPIEIXXGVMLAVXAVKEKLKGMXK 653
             + +G +P  +  G   A     E L+   K
Sbjct: 108 SLVLEGLHPRIVTEGFEWANTKTLELLEKFKK 139


>U13070-2|AAC46642.1|  539|Caenorhabditis elegans Chaperonin
           containing tcp-1 protein6, isoform a protein.
          Length = 539

 Score = 31.9 bits (69), Expect = 0.59
 Identities = 22/92 (23%), Positives = 41/92 (44%)
 Frame = +3

Query: 378 GPRKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGF 557
           G  K+TKDG  +   + +    Q+  A ++   +   ++  GDGTT+  +L   + K+  
Sbjct: 52  GDIKLTKDGNVLLHEMAI----QHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAE 107

Query: 558 EKISKGANPIEIXXGVMLAVXAVKEKLKGMXK 653
             + +G +P  +  G   A     E L+   K
Sbjct: 108 SLVLEGLHPRIVTEGFEWANTKTLELLEKFKK 139


>AC024136-4|AAF35963.3|  543|Caenorhabditis elegans Hypothetical
           protein F54A3.3 protein.
          Length = 543

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = +3

Query: 390 ITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKIS 569
           +T DG  + + + +K       AK +  +A   +EE GDGTT+  +LA  +       + 
Sbjct: 61  MTNDGNAILREITVKHP----AAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLE 116

Query: 570 KGANP 584
           +  +P
Sbjct: 117 QKTHP 121


>AC024201-2|AAK82924.1|  556|Caenorhabditis elegans Abnormal cell
           lineage protein 17,isoform b protein.
          Length = 556

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = -1

Query: 736 QQXACRLPXPPLADMVATCAIFSGVVTXFXIPLSFSLTAXTASITPXXISIGL-APFDIF 560
           Q  AC  P PP A++  T A+ S + T F   L + L+A T       I  G+ +   + 
Sbjct: 460 QSGACHRPTPPQAEIYMT-AVISSLATGFSC-LMWVLSAKTVHAWKNFIFCGMCSSAPVK 517

Query: 559 SKPSFAI 539
            KP+ AI
Sbjct: 518 VKPNRAI 524


>Z72504-5|CAA96602.2|  812|Caenorhabditis elegans Hypothetical
           protein C29E6.1a protein.
          Length = 812

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +1

Query: 43  IFDVFHNLQPEEDHVLRTRLESS 111
           IFD+FHN QP E  V+ T++  S
Sbjct: 604 IFDIFHNGQPVEAVVVGTKISLS 626


>Z72504-4|CAH60755.1|  653|Caenorhabditis elegans Hypothetical
           protein C29E6.1b protein.
          Length = 653

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +1

Query: 43  IFDVFHNLQPEEDHVLRTRLESS 111
           IFD+FHN QP E  V+ T++  S
Sbjct: 445 IFDIFHNGQPVEAVVVGTKISLS 467


>X91045-1|CAA62505.1|  693|Caenorhabditis elegans let-653 protein.
          Length = 693

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +1

Query: 43  IFDVFHNLQPEEDHVLRTRLESS 111
           IFD+FHN QP E  V+ T++  S
Sbjct: 485 IFDIFHNGQPVEAVVVGTKISLS 507


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,895,594
Number of Sequences: 27780
Number of extensions: 332157
Number of successful extensions: 875
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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