Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_K17
         (811 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.7  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -3

Query: 722 PXXGGGGXXXXXXXXXGXXKKKKXXGGXGGGG 627
           P  GGGG             +++  GG GGGG
Sbjct: 222 PGPGGGGGGGGRDRDHRDRDREREGGGNGGGG 253



 Score = 25.0 bits (52), Expect = 2.8
 Identities = 12/32 (37%), Positives = 12/32 (37%)
 Frame = -3

Query: 722 PXXGGGGXXXXXXXXXGXXKKKKXXGGXGGGG 627
           P  GGGG         G        GG GGGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGG 231



 Score = 24.2 bits (50), Expect = 4.8
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = -3

Query: 728 PPPXXGGGGXXXXXXXXXGXXKKKKXXGGXGGGG 627
           P P  GGGG            +++    G GGGG
Sbjct: 222 PGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGG 255



 Score = 23.4 bits (48), Expect = 8.4
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 689 GGGXXPPPPXXGGGGG 736
           GG    P P  GGGGG
Sbjct: 216 GGSSGGPGPGGGGGGG 231


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 696 GXPPPPPXGG 725
           G PPPPP GG
Sbjct: 529 GPPPPPPPGG 538



 Score = 24.6 bits (51), Expect = 3.7
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -2

Query: 735 PPPPPXXGGGGXXPPP 688
           PPPPP  GG     PP
Sbjct: 530 PPPPPPPGGAVLNIPP 545



 Score = 23.8 bits (49), Expect = 6.4
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +3

Query: 669 PPXPXXXXXGXPPPPPXGGG 728
           PP P       PPP P  GG
Sbjct: 582 PPAPPPPPPMGPPPSPLAGG 601


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 447,986
Number of Sequences: 2352
Number of extensions: 7314
Number of successful extensions: 26
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)