Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_K16
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0263 + 21777178-21777342,21777742-21777823,21777939-217780...    33   0.40 
01_06_1202 + 35396165-35396260,35396398-35396549,35396694-353969...    31   1.2  
11_01_0051 + 391254-391343,391460-391862,392345-392352,393627-39...    31   1.6  
10_08_0929 + 21633179-21633377,21633466-21633809,21633905-21634297     31   1.6  
12_01_0052 + 433203-433292,433409-433815,434435-434447,437081-43...    30   2.1  
03_05_1091 + 30322035-30322739,30322861-30324043,30324114-303251...    29   3.7  
03_01_0574 + 4243019-4244284                                           29   4.9  

>11_06_0263 +
           21777178-21777342,21777742-21777823,21777939-21778028,
           21778447-21778604,21778852-21778873,21779048-21779175,
           21779486-21779685,21780600-21780663,21781594-21781704,
           21781804-21781941,21782306-21782448,21782521-21782575,
           21782921-21782977,21783093-21783176
          Length = 498

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 20/75 (26%), Positives = 30/75 (40%)
 Frame = +1

Query: 166 VKMLADGEIVGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKKDWSDH 345
           V    DG  +  GS + T+   DLN +  +       +   +L L  S G+   K+W   
Sbjct: 121 VSFSPDGRCLASGSGDTTVRFWDLNTQTPLFTCKGGSLNSCILVLISSVGQSCHKNWVLC 180

Query: 346 ALWWPTRNKWLSRPK 390
             W P  N  +S  K
Sbjct: 181 IAWSPDGNHLVSGSK 195


>01_06_1202 +
           35396165-35396260,35396398-35396549,35396694-35396938,
           35397044-35398350
          Length = 599

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/63 (23%), Positives = 27/63 (42%)
 Frame = +1

Query: 190 IVGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKKDWSDHALWWPTRN 369
           +V    +N+TI+   + + RT    G   +    +K   S+   F  +  +  LWW   +
Sbjct: 71  VVNHAQYNVTIHWHGIRQFRTGWADGPEFVTQCPIKPGGSYKYRFTIEGQEGTLWWHAHS 130

Query: 370 KWL 378
            WL
Sbjct: 131 SWL 133


>11_01_0051 +
           391254-391343,391460-391862,392345-392352,393627-393704,
           395371-395763
          Length = 323

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/63 (20%), Positives = 29/63 (46%)
 Frame = +1

Query: 190 IVGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKKDWSDHALWWPTRN 369
           ++  G +N+T++   + + RT    G  ++    ++  +S+   F     +  LWW   +
Sbjct: 69  LINRGRYNMTLHWHGVRQMRTGWSDGPEYVTQCPVRPGQSYRYRFTVAAQEGTLWWHAHS 128

Query: 370 KWL 378
            WL
Sbjct: 129 SWL 131


>10_08_0929 + 21633179-21633377,21633466-21633809,21633905-21634297
          Length = 311

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = +3

Query: 732 GSRYPAPAEITFCDSCXVTAKXXTSSLRTXI*APERGSATGIXGPAXA 875
           G+R P P  +T C SC   A   T++      AP R   T    PA A
Sbjct: 259 GARVPPPTTLTMCPSCERVASAATTTRNNSGAAPARPVPTRPWPPAAA 306


>12_01_0052 +
           433203-433292,433409-433815,434435-434447,437081-437473
          Length = 300

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/63 (20%), Positives = 29/63 (46%)
 Frame = +1

Query: 190 IVGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKKDWSDHALWWPTRN 369
           ++  G +N+T++   + + RT    G  ++    ++  +S+   F     +  LWW   +
Sbjct: 69  LINRGRYNVTLHWHGVRQMRTGWSDGPEYVTQCPVRPGQSYRYRFTVAAQEGTLWWHAHS 128

Query: 370 KWL 378
            WL
Sbjct: 129 SWL 131


>03_05_1091 + 30322035-30322739,30322861-30324043,30324114-30325105,
            30326409-30326798,30326896-30330060
          Length = 2144

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 364  RNKWLSRPKHT-LDQYGVHADAALHFTPMHKPLRIQLPDL 480
            R + +S+P +T + Q+  H   AL F P HK  R+   DL
Sbjct: 1543 RMQAMSKPTYTAITQHAKHGKPALVFVPTHKHARLTAVDL 1582


>03_01_0574 + 4243019-4244284
          Length = 421

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +1

Query: 166 VKMLADGEIVGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGV 288
           V  L DG+ +   SWN    VT+L EK+T  + GD +  G+
Sbjct: 162 VVRLEDGDYLELVSWNPNWAVTEL-EKKTAALTGDANANGI 201


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,533,158
Number of Sequences: 37544
Number of extensions: 394230
Number of successful extensions: 883
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)