Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_K16
(887 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-6|CAA99790.1| 720|Caenorhabditis elegans Hypothetical pr... 163 2e-40
AF217185-1|AAF20162.1| 720|Caenorhabditis elegans UNC-112 protein. 163 2e-40
Z46934-9|CAD18881.1| 204|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z81041-2|CAB02787.4| 1403|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z75530-6|CAA99790.1| 720|Caenorhabditis elegans Hypothetical
protein C47E8.7 protein.
Length = 720
Score = 163 bits (395), Expect = 2e-40
Identities = 71/136 (52%), Positives = 99/136 (72%)
Frame = +1
Query: 175 LADGEIVGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKKDWSDHALW 354
L +G + DG W L I VTDLN +R++ V G++++GG+ML+L E +DWSDHALW
Sbjct: 4 LVEGTSIIDGKWQLPILVTDLNIQRSISVLGNLNVGGLMLELVSECDVE--RDWSDHALW 61
Query: 355 WPTRNKWLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKIDFSIDTFSAVI 534
WP + +WL + TLDQ G+ A+ L FTPMHK RIQLPD++ ID ++DFS+++F A
Sbjct: 62 WPEKRRWLQHTRSTLDQNGITAETQLEFTPMHKEARIQLPDMQMIDARVDFSVNSFKATK 121
Query: 535 QLCKNLGIRHSEELSL 582
+LC++LGIR+SEELSL
Sbjct: 122 KLCRDLGIRYSEELSL 137
>AF217185-1|AAF20162.1| 720|Caenorhabditis elegans UNC-112 protein.
Length = 720
Score = 163 bits (395), Expect = 2e-40
Identities = 71/136 (52%), Positives = 99/136 (72%)
Frame = +1
Query: 175 LADGEIVGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKKDWSDHALW 354
L +G + DG W L I VTDLN +R++ V G++++GG+ML+L E +DWSDHALW
Sbjct: 4 LVEGTSIIDGKWQLPILVTDLNIQRSISVLGNLNVGGLMLELVSECDVE--RDWSDHALW 61
Query: 355 WPTRNKWLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKIDFSIDTFSAVI 534
WP + +WL + TLDQ G+ A+ L FTPMHK RIQLPD++ ID ++DFS+++F A
Sbjct: 62 WPEKRRWLQHTRSTLDQNGITAETQLEFTPMHKEARIQLPDMQMIDARVDFSVNSFKATK 121
Query: 535 QLCKNLGIRHSEELSL 582
+LC++LGIR+SEELSL
Sbjct: 122 KLCRDLGIRYSEELSL 137
>Z46934-9|CAD18881.1| 204|Caenorhabditis elegans Hypothetical
protein ZK1320.11 protein.
Length = 204
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 514 DTFSAVIQLCKNLGIRHSEELSLCYPLEASHLKQNYQN-LKEAKRIKNTQAPDTNTFIAA 690
D V+ + K+ G+ H ++L + EA+H ++N++ + EA+ N PD + F
Sbjct: 14 DKLDEVVSIFKS-GV-HIDDLE-GWQTEAAHEEENFEKFITEAREFSNMSPPDIDQFEIK 70
Query: 691 TRGSSN 708
RG+++
Sbjct: 71 ARGAAS 76
>Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 172 MLADGEIVGDGSWNLTIYVTDLNEK 246
+ A G ++GD S NLTI+ T+++ K
Sbjct: 1244 LTASGHVLGDSSTNLTIHSTNIHSK 1268
>Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 172 MLADGEIVGDGSWNLTIYVTDLNEK 246
+ A G ++GD S NLTI+ T+++ K
Sbjct: 1244 LTASGHVLGDSSTNLTIHSTNIHSK 1268
>Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical
protein F53B6.2b protein.
Length = 711
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 377 SPDQNTPWTSTEFTRTPPYTSRPCTNH 457
S ++ W+ + R PP SRPC H
Sbjct: 147 STGKSVQWSQCDARRRPPEKSRPCNQH 173
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 377 SPDQNTPWTSTEFTRTPPYTSRPCTNH 457
S ++ W+ + R PP SRPC H
Sbjct: 481 STGKSVQWSQCDARRRPPEKSRPCNQH 507
>Z81041-2|CAB02787.4| 1403|Caenorhabditis elegans Hypothetical protein
C27A7.4 protein.
Length = 1403
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 520 FSAVIQLCKNLGIRHSEELS-LCYPLEASHLKQNYQNLKEAKRIKNTQA 663
FS +QLCKN +R S++ + L P K + N++E K++ T A
Sbjct: 1095 FSGAVQLCKNRNVRVSDKFAELMTP-----TKDDMPNVQERKQVLETVA 1138
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,067,227
Number of Sequences: 27780
Number of extensions: 328293
Number of successful extensions: 931
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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