Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_K15
         (847 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   3.5  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   4.7  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              22   8.2  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 6/24 (25%), Positives = 16/24 (66%)
 Frame = +3

Query: 237 GNAFIVSAIPIWLFWRVHSLEIST 308
           G+ +I   + ++ +WR+++  +ST
Sbjct: 254 GSFYIPMLVMLFFYWRIYNAAVST 277


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +3

Query: 246 FIVSAIPIWLFWRVHSLEIS 305
           F+ S  P W FW   S E S
Sbjct: 21  FVTSHRPAWWFWTATSHEAS 40


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = -1

Query: 706 RINFHLHLVPVESRARSPDAAVRDTM*LTVGVNVRRM*KLLKMTI 572
           ++    H++P E  A+     VR +  +T+    R+  K + +TI
Sbjct: 12  KVGLQAHVIPAELTAKLLGNCVRVSPVITIEPRRRKFHKPITLTI 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,034
Number of Sequences: 438
Number of extensions: 4911
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)