Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_K14
         (892 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical ...    47   2e-05
AL021497-1|CAA16404.1|  382|Caenorhabditis elegans Hypothetical ...    36   0.039
AL110477-10|CAB54334.1|  328|Caenorhabditis elegans Hypothetical...    35   0.068
Z70750-3|CAA94738.1|  374|Caenorhabditis elegans Hypothetical pr...    34   0.12 
U64859-10|AAC69091.2|  383|Caenorhabditis elegans Hypothetical p...    34   0.12 

>AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical
           protein Y51A2D.8 protein.
          Length = 386

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
 Frame = +1

Query: 247 HNREYKDDADRELHYQSFKKHLAEINQLNEKNPY----TTFGINKFADYTPEEQQSRLGL 414
           +NR+YKD+++ +  + +F K    +++LN K+      T FGINKF+D +  E   RL  
Sbjct: 50  YNRKYKDESENQQRFNNFVKSYNNVDKLNAKSKAAGYDTQFGINKFSDLSTAEFHGRLSN 109

Query: 415 RLPAKKT 435
            +P+  T
Sbjct: 110 VVPSNNT 116


>AL021497-1|CAA16404.1|  382|Caenorhabditis elegans Hypothetical
           protein Y51A2D.1 protein.
          Length = 382

 Score = 35.9 bits (79), Expect = 0.039
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
 Frame = +1

Query: 250 NREYKDDADRELHYQSFKKHLAEINQLNEK----NPYTTFGINKFADYTPEEQQSRLGLR 417
           +R YK +A+ +L  Q+F K    + +LN+        + F +N+F+D T  E   RL  R
Sbjct: 52  SRTYKSEAENQLRLQNFVKSRNNVVRLNKNAQKAGRNSNFAVNQFSDLTTSELHQRLS-R 110

Query: 418 LPAKKT 435
            P   T
Sbjct: 111 FPPNLT 116


>AL110477-10|CAB54334.1|  328|Caenorhabditis elegans Hypothetical
           protein Y113G7B.15 protein.
          Length = 328

 Score = 35.1 bits (77), Expect = 0.068
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
 Frame = +1

Query: 247 HNREYKDDADRELHYQSFKKHLAEINQLNEK----NPYTTFGINKFADYTPEEQQSR 405
           H + Y+  A+++     F K+  +I +LN K        TFG NKFAD   +E  +R
Sbjct: 3   HKKHYRTPAEKDRRLAHFAKNHQKIQELNAKARREGRNVTFGWNKFADKNRQELSAR 59


>Z70750-3|CAA94738.1|  374|Caenorhabditis elegans Hypothetical
           protein C50F4.3 protein.
          Length = 374

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
 Frame = +1

Query: 247 HNREYKDDADRELHYQSF---KKHLAEINQLNEKNPY-TTFGINKFADYTPEE 393
           + R YKD+ +++  +Q F      + ++N+  +K  + T +GINKF+D + +E
Sbjct: 54  YKRNYKDEIEKKFRFQQFVATHNRVGKMNKAAKKAGHDTKYGINKFSDLSKKE 106


>U64859-10|AAC69091.2|  383|Caenorhabditis elegans Hypothetical
           protein R09F10.1 protein.
          Length = 383

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +1

Query: 250 NREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQ 399
           +R+Y    + E  YQ F +++ E     E+N      +N+F D+T EE Q
Sbjct: 90  DRKYTSVEEFEYRYQIFLRNVIEFEAEEERNLGLDLDVNEFTDWTDEELQ 139


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,913,594
Number of Sequences: 27780
Number of extensions: 169524
Number of successful extensions: 415
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)