Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_K13
(863 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0379 + 2830475-2830614,2831180-2831304,2831510-2831556,283... 90 2e-18
04_04_1205 + 31723127-31723266,31724239-31724363,31724454-317245... 89 4e-18
03_06_0215 + 32416097-32416236,32416727-32416851,32417092-324171... 88 7e-18
07_03_1271 + 25356087-25356232,25356419-25356543,25356650-253566... 81 8e-16
04_04_1206 + 31727931-31728048,31728492-31728538,31728782-317289... 52 4e-07
08_01_0659 + 5686782-5686864,5687218-5687342,5687574-5687620,568... 50 3e-06
07_03_1270 + 25351791-25352027,25352122-25352155,25352435-25352493 32 0.51
>07_01_0379 +
2830475-2830614,2831180-2831304,2831510-2831556,
2831838-2831962,2832116-2832182,2832266-2832328,
2832488-2832557,2832642-2832742,2832837-2832941,
2833023-2833211
Length = 343
Score = 89.8 bits (213), Expect = 2e-18
Identities = 42/87 (48%), Positives = 61/87 (70%)
Frame = +3
Query: 78 MEKYISVKDLEEAALKRLPKSVRDYYSSGATEEQTLGENKNAFQRLRISPKCLVGVNNCD 257
M + +V + + A ++LPK + DYY+SGA +E TL EN+ AF R+ P+ L+ V+ D
Sbjct: 1 MGEITNVTEYQAIAKQKLPKMIYDYYASGAEDEWTLQENREAFARILFRPRILIDVSKID 60
Query: 258 LRTTVLGNEISMPIGISATAMQRMAHP 338
+ TTVLG +ISMPI I+ +AMQ+MAHP
Sbjct: 61 MATTVLGFKISMPIMIAPSAMQKMAHP 87
Score = 57.2 bits (132), Expect = 2e-08
Identities = 27/48 (56%), Positives = 32/48 (66%)
Frame = +1
Query: 466 LYIYNDREVTKNLVLRAEKHGFTAIALTVDTPLFGLRRADIRNXLHCP 609
+ +Y DR V + LV RAE+ GF AIALTVDTP G R ADI+N P
Sbjct: 103 IMVYKDRRVVEQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLP 150
>04_04_1205 +
31723127-31723266,31724239-31724363,31724454-31724500,
31724601-31724636,31724771-31724895,31725013-31725079,
31725164-31725226,31725354-31725423,31725522-31725622,
31725978-31726160
Length = 318
Score = 89.0 bits (211), Expect = 4e-18
Identities = 41/87 (47%), Positives = 60/87 (68%)
Frame = +3
Query: 78 MEKYISVKDLEEAALKRLPKSVRDYYSSGATEEQTLGENKNAFQRLRISPKCLVGVNNCD 257
ME +V + E+ A ++LPK + DYY+SGA ++ TL EN+ AF R+ P+ L+ V+ +
Sbjct: 1 MELITNVSEYEQLAKQKLPKMIYDYYASGAEDQWTLKENREAFSRILFRPRILIDVSRIN 60
Query: 258 LRTTVLGNEISMPIGISATAMQRMAHP 338
+ T VLG ISMPI I+ +AMQ+MAHP
Sbjct: 61 MATNVLGFNISMPIMIAPSAMQKMAHP 87
Score = 67.3 bits (157), Expect = 1e-11
Identities = 41/89 (46%), Positives = 51/89 (57%)
Frame = +1
Query: 343 GELANVKAAAKEQTIFMLSTIATTSIEEVANAAPDATKWFQLYIYNDREVTKNLVLRAEK 522
GELA +AA+ TI LS+ +T+S+EEV Y DR + + LV RAE
Sbjct: 89 GELATARAASAAGTIMTLSSWSTSSVEEV---------------YKDRNIVRQLVRRAEL 133
Query: 523 HGFTAIALTVDTPLFGLRRADIRNXLHCP 609
GF AIALTVDTP G R ADI+N + P
Sbjct: 134 AGFKAIALTVDTPRLGRREADIKNRFNLP 162
>03_06_0215 +
32416097-32416236,32416727-32416851,32417092-32417138,
32417445-32417569,32417673-32417739,32417808-32417900,
32418024-32418093,32418193-32418398,32418489-32418677
Length = 353
Score = 88.2 bits (209), Expect = 7e-18
Identities = 41/87 (47%), Positives = 60/87 (68%)
Frame = +3
Query: 78 MEKYISVKDLEEAALKRLPKSVRDYYSSGATEEQTLGENKNAFQRLRISPKCLVGVNNCD 257
M + +V + + A ++LPK + DYY+SGA +E TL EN+ AF R+ P+ L+ V+ D
Sbjct: 1 MGEITNVMEYQAIAKQKLPKMIYDYYASGAEDEWTLKENREAFSRILFRPRILIDVSKID 60
Query: 258 LRTTVLGNEISMPIGISATAMQRMAHP 338
+ TVLG +ISMPI I+ +AMQ+MAHP
Sbjct: 61 MSATVLGFKISMPIMIAPSAMQKMAHP 87
Score = 57.2 bits (132), Expect = 2e-08
Identities = 27/48 (56%), Positives = 32/48 (66%)
Frame = +1
Query: 466 LYIYNDREVTKNLVLRAEKHGFTAIALTVDTPLFGLRRADIRNXLHCP 609
+ +Y DR V + LV RAE+ GF AIALTVDTP G R ADI+N P
Sbjct: 103 IMVYKDRNVVEQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLP 150
>07_03_1271 +
25356087-25356232,25356419-25356543,25356650-25356696,
25356792-25356869,25356949-25357073,25357312-25357372,
25357723-25357785,25358262-25358331,25358740-25358945,
25359074-25359253
Length = 366
Score = 81.4 bits (192), Expect = 8e-16
Identities = 42/89 (47%), Positives = 59/89 (66%)
Frame = +1
Query: 343 GELANVKAAAKEQTIFMLSTIATTSIEEVANAAPDATKWFQLYIYNDREVTKNLVLRAEK 522
GE A +AAA I +LS ++ IE+VA++ +A +++QLY+Y +R V+ LV RAE
Sbjct: 91 GEKATARAAASCNAIMVLSFSSSCKIEDVASSC-NAIRFYQLYVYKNRNVSATLVRRAES 149
Query: 523 HGFTAIALTVDTPLFGLRRADIRNXLHCP 609
GF A+ LTVDTP+ G R ADIRN + P
Sbjct: 150 CGFKALLLTVDTPMLGRREADIRNKMVFP 178
Score = 71.3 bits (167), Expect = 9e-13
Identities = 33/83 (39%), Positives = 52/83 (62%)
Frame = +3
Query: 90 ISVKDLEEAALKRLPKSVRDYYSSGATEEQTLGENKNAFQRLRISPKCLVGVNNCDLRTT 269
++V++ +E A K LPK DY + GA +E TL EN A+ R+ + P+ LV V+ D+ TT
Sbjct: 7 VNVREYQELAKKALPKMAYDYINGGAEDEHTLRENIAAYTRIILRPRVLVDVSKIDMSTT 66
Query: 270 VLGNEISMPIGISATAMQRMAHP 338
+LG + PI ++ T ++AHP
Sbjct: 67 LLGYTMRSPIIVAPTGGHKLAHP 89
>04_04_1206 +
31727931-31728048,31728492-31728538,31728782-31728906,
31729067-31729133,31729221-31729283,31729429-31729498,
31729751-31729770,31729840-31729956,31730046-31730227,
31730586-31730640,31731604-31731697,31731791-31731900,
31733167-31733193,31733510-31733701
Length = 428
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = +1
Query: 466 LYIYNDREVTKNLVLRAEKHGFTAIALTVDTPLFGLRRADIRNXLHCP 609
+ IY DR + + L+ RAEK G+ AI LTVD P G R AD++N P
Sbjct: 54 IMIYKDRNLVQQLIQRAEKAGYKAIVLTVDAPWLGRREADVKNRFTLP 101
Score = 32.7 bits (71), Expect = 0.39
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +3
Query: 93 SVKDLEEAALKRLPKSVRDYYSSGATEEQTLGENK 197
+V + EE A +LPK V D+Y+ A ++ TL EN+
Sbjct: 6 NVCEYEELAKHKLPKMVYDFYAVDAEDQWTLRENR 40
>08_01_0659 +
5686782-5686864,5687218-5687342,5687574-5687620,
5687918-5688048,5688608-5688853,5689067-5689079
Length = 214
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = +1
Query: 475 YNDREVTKNLVLRAEKHGFTAIALTVDTPLFGLRRADIRN 594
Y R V + V RAE+ GF AIALTVDTP G R ADI+N
Sbjct: 89 YRYRNVVEQFVRRAERAGFKAIALTVDTPWLGRREADIKN 128
Score = 49.2 bits (112), Expect = 4e-06
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = +3
Query: 207 QRLRISPKCLVGVNNCDLRTTVLGNEISMPIGISATAMQRMAHP 338
++L+ P+ L+ V+ D+ VLG EISMP+ I+ +AMQ+MAHP
Sbjct: 25 RKLQFCPRILIDVSKIDMSAIVLGFEISMPVMIAPSAMQKMAHP 68
>07_03_1270 + 25351791-25352027,25352122-25352155,25352435-25352493
Length = 109
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 90 ISVKDLEEAALKRLPKSVRDYYSSGATEEQTL 185
+++ + E A K LPK + DY +SGA +E TL
Sbjct: 7 LNIYEHHEIAKKALPKVIYDYINSGAEDEHTL 38
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,956,470
Number of Sequences: 37544
Number of extensions: 284446
Number of successful extensions: 615
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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