Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_K10
         (959 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54238-1|CAA90992.2|  281|Caenorhabditis elegans Hypothetical pr...    36   0.043
Z81525-8|CAB04257.1|  208|Caenorhabditis elegans Hypothetical pr...    31   0.93 
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr...    31   0.93 
AL031629-6|CAA20980.2|  948|Caenorhabditis elegans Hypothetical ...    31   1.6  
Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical pr...    30   2.1  
AF000198-8|AAP68908.1|  435|Caenorhabditis elegans Collagen prot...    30   2.1  
AC006696-4|AAF39985.1|  215|Caenorhabditis elegans Hypothetical ...    29   3.7  
Z81479-3|CAB03942.1|  283|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z81479-2|CAB03941.1|  283|Caenorhabditis elegans Hypothetical pr...    29   4.9  
AF067607-9|AAF98609.1|  460|Caenorhabditis elegans Collagen prot...    29   4.9  
AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical...    29   6.5  
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as...    28   8.6  
AL110484-17|CAB54408.1|  586|Caenorhabditis elegans Hypothetical...    28   8.6  

>Z54238-1|CAA90992.2|  281|Caenorhabditis elegans Hypothetical
           protein T28C6.1 protein.
          Length = 281

 Score = 35.9 bits (79), Expect = 0.043
 Identities = 23/73 (31%), Positives = 27/73 (36%)
 Frame = -2

Query: 955 GXXXGGGXXXXKAXSXGGGXXXKTEGGEXXPXXSXGGSPXASPXGXKGGTGXAGXXXRXG 776
           G   GGG    +    GGG     +GGE       GGS   S  G +GG G  G     G
Sbjct: 183 GGQNGGGQGGNQG---GGGGRGGNQGGEQGGWGGQGGSQGGSQGGSQGGWGNQGGQQGGG 239

Query: 775 NKXSEPRGACQGG 737
               +  G   GG
Sbjct: 240 RGGQQGPGGWGGG 252



 Score = 29.5 bits (63), Expect = 3.7
 Identities = 30/128 (23%), Positives = 36/128 (28%), Gaps = 1/128 (0%)
 Frame = -2

Query: 958 RGXXXGGGXXXXKAXSXGGGXXXKTEGGEXXPXXSXGGSPXASPXGXKGGTGXAGXXXRX 779
           +G   G       A   GG    +  GG        GG   +   G +GG G      + 
Sbjct: 132 QGGWGGQQGGNSNAGGWGGSQGGQNGGGGRGGSGGQGGWGGSQDGGSQGGWGGQNGGGQG 191

Query: 778 GNK-XSEPRGACQGGXARXXLXSGRXSPPXDXSVDFXDXRQGGGAYGXXPATXPFXGXWP 602
           GN+     RG  QGG        G  S               GG  G         G W 
Sbjct: 192 GNQGGGGGRGGNQGGEQGGWGGQG-GSQGGSQGGSQGGWGNQGGQQGGGRGGQQGPGGWG 250

Query: 601 XGGLXXXW 578
            GG    W
Sbjct: 251 GGGRGGGW 258


>Z81525-8|CAB04257.1|  208|Caenorhabditis elegans Hypothetical
           protein F33A8.3 protein.
          Length = 208

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 16/54 (29%), Positives = 19/54 (35%)
 Frame = -2

Query: 955 GXXXGGGXXXXKAXSXGGGXXXKTEGGEXXPXXSXGGSPXASPXGXKGGTGXAG 794
           G   GGG    +    G G      GGE     + GG       G +GG G  G
Sbjct: 140 GAPRGGGRGGSRRGGGGRGGGRTNSGGEETARDTDGGERGGRGGGRRGGRGRGG 193


>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical protein
            R08B4.1b protein.
          Length = 1160

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 20/68 (29%), Positives = 22/68 (32%)
 Frame = -2

Query: 943  GGGXXXXKAXSXGGGXXXKTEGGEXXPXXSXGGSPXASPXGXKGGTGXAGXXXRXGNKXS 764
            GGG       S GGG    + GG        GG    +  G   G G AG     G    
Sbjct: 801  GGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGAGAGNGNGAGAG 860

Query: 763  EPRGACQG 740
               GA  G
Sbjct: 861  NGNGAGAG 868


>AL031629-6|CAA20980.2|  948|Caenorhabditis elegans Hypothetical
           protein Y106G6D.7 protein.
          Length = 948

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/60 (28%), Positives = 19/60 (31%)
 Frame = -2

Query: 919 AXSXGGGXXXKTEGGEXXPXXSXGGSPXASPXGXKGGTGXAGXXXRXGNKXSEPRGACQG 740
           A + G G      G    P     G     P G  G     G   R GN  S+ RG   G
Sbjct: 725 AATRGSGPMPPLNGTAPLPSGQQNGMNVPPPNGFNGAPMRGGFVPRGGNNFSQSRGGMMG 784


>Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 27/109 (24%), Positives = 30/109 (27%)
 Frame = -2

Query: 955 GXXXGGGXXXXKAXSXGGGXXXKTEGGEXXPXXSXGGSPXASPXGXKGGTGXAGXXXRXG 776
           G   GGG         GGG      GG        GG    S  G  GG+         G
Sbjct: 102 GCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGG 161

Query: 775 NKXSEPRGACQGGXARXXLXSGRXSPPXDXSVDFXDXRQGGGAYGXXPA 629
                  G C GG +      G    P            GGG Y   P+
Sbjct: 162 GCGGGGGGGCGGGSSG---GGGYAVAPSGGGGCGGGGSSGGGGYAVAPS 207



 Score = 29.9 bits (64), Expect = 2.8
 Identities = 20/69 (28%), Positives = 22/69 (31%)
 Frame = -2

Query: 943 GGGXXXXKAXSXGGGXXXKTEGGEXXPXXSXGGSPXASPXGXKGGTGXAGXXXRXGNKXS 764
           GGG       S GGG      GG        GGS   +  G  GG   +G     G    
Sbjct: 208 GGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTG 267

Query: 763 EPRGACQGG 737
              G   GG
Sbjct: 268 GGGGYAGGG 276



 Score = 29.1 bits (62), Expect = 4.9
 Identities = 18/59 (30%), Positives = 19/59 (32%)
 Frame = -2

Query: 913 SXGGGXXXKTEGGEXXPXXSXGGSPXASPXGXKGGTGXAGXXXRXGNKXSEPRGACQGG 737
           S GGG      GG        GG     P    GG G  G     G   + P   C GG
Sbjct: 24  SAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82


>Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 27/109 (24%), Positives = 30/109 (27%)
 Frame = -2

Query: 955 GXXXGGGXXXXKAXSXGGGXXXKTEGGEXXPXXSXGGSPXASPXGXKGGTGXAGXXXRXG 776
           G   GGG         GGG      GG        GG    S  G  GG+         G
Sbjct: 102 GCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGG 161

Query: 775 NKXSEPRGACQGGXARXXLXSGRXSPPXDXSVDFXDXRQGGGAYGXXPA 629
                  G C GG +      G    P            GGG Y   P+
Sbjct: 162 GCGGGGGGGCGGGSSG---GGGYAVAPSGGGGCGGGGSSGGGGYAVAPS 207



 Score = 29.9 bits (64), Expect = 2.8
 Identities = 20/69 (28%), Positives = 22/69 (31%)
 Frame = -2

Query: 943 GGGXXXXKAXSXGGGXXXKTEGGEXXPXXSXGGSPXASPXGXKGGTGXAGXXXRXGNKXS 764
           GGG       S GGG      GG        GGS   +  G  GG   +G     G    
Sbjct: 208 GGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTG 267

Query: 763 EPRGACQGG 737
              G   GG
Sbjct: 268 GGGGYAGGG 276



 Score = 29.1 bits (62), Expect = 4.9
 Identities = 18/59 (30%), Positives = 19/59 (32%)
 Frame = -2

Query: 913 SXGGGXXXKTEGGEXXPXXSXGGSPXASPXGXKGGTGXAGXXXRXGNKXSEPRGACQGG 737
           S GGG      GG        GG     P    GG G  G     G   + P   C GG
Sbjct: 24  SAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82


>AF000198-8|AAP68908.1|  435|Caenorhabditis elegans Collagen protein
           51 protein.
          Length = 435

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 29/102 (28%), Positives = 37/102 (36%), Gaps = 1/102 (0%)
 Frame = -2

Query: 943 GGGXXXXKAXSXGGGXXXKTEGGEXXPXXSXGGSPXASPXGXKGGTGXAGXXXRXGNKXS 764
           GGG     A   GGG      GG      + GG+  A   G  GG G  G     G   +
Sbjct: 321 GGGGGDFPAGGGGGGYSTGGGGGRADSGGAAGGAGGAG--GYSGGGGGGGGGAAAGGGYN 378

Query: 763 EPRGACQGGXARXXLXSGRXSP-PXDXSVDFXDXRQGGGAYG 641
              G   GG A     + + +P P   +    +   GGGA G
Sbjct: 379 AGGG---GGGAPQAAPAPQAAPAPAAPAGGGYNAGGGGGAGG 417



 Score = 28.3 bits (60), Expect = 8.6
 Identities = 19/62 (30%), Positives = 22/62 (35%)
 Frame = -2

Query: 922 KAXSXGGGXXXKTEGGEXXPXXSXGGSPXASPXGXKGGTGXAGXXXRXGNKXSEPRGACQ 743
           +  + GGG      GG      + GG   A   G  GG G AG     G       GA  
Sbjct: 316 RTPAGGGGGGDFPAGGGGGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGGGGG--GGAAA 373

Query: 742 GG 737
           GG
Sbjct: 374 GG 375


>AC006696-4|AAF39985.1|  215|Caenorhabditis elegans Hypothetical
           protein W08E12.6 protein.
          Length = 215

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +1

Query: 874 PPLRFXXXXPPPXSGPXXAPXPP 942
           PP  F    PPP  GP  AP PP
Sbjct: 143 PPPCFGPACPPPCFGPACAPPPP 165


>Z81479-3|CAB03942.1|  283|Caenorhabditis elegans Hypothetical
           protein C34F6.3 protein.
          Length = 283

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
 Frame = -2

Query: 865 PXXSXGGSPXASPXGXKGGTGXAGXXXRXGNKXSE-PRG 752
           P  + GG     P G  GG G  G   R GN+    PRG
Sbjct: 143 PPGAVGGPGPKGPPGPPGGPGELGGPGRGGNRGPPGPRG 181


>Z81479-2|CAB03941.1|  283|Caenorhabditis elegans Hypothetical
           protein C34F6.2 protein.
          Length = 283

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
 Frame = -2

Query: 865 PXXSXGGSPXASPXGXKGGTGXAGXXXRXGNKXSE-PRG 752
           P  + GG     P G  GG G  G   R GN+    PRG
Sbjct: 143 PPGAVGGPGPKGPPGPPGGPGELGGPGRGGNRGPPGPRG 181


>AF067607-9|AAF98609.1|  460|Caenorhabditis elegans Collagen protein
           102 protein.
          Length = 460

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/42 (35%), Positives = 16/42 (38%)
 Frame = -2

Query: 919 AXSXGGGXXXKTEGGEXXPXXSXGGSPXASPXGXKGGTGXAG 794
           A    GG   K   GE  P    G +  A P G  G  G AG
Sbjct: 127 AMDANGGACIKCPAGEPGPPGPEGPAGPAGPAGNAGADGEAG 168


>AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical
           protein Y43F8C.20 protein.
          Length = 193

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 22/82 (26%), Positives = 24/82 (29%)
 Frame = -2

Query: 955 GXXXGGGXXXXKAXSXGGGXXXKTEGGEXXPXXSXGGSPXASPXGXKGGTGXAGXXXRXG 776
           G   GGG       +  GG      GG         G     P G  GG G  G     G
Sbjct: 106 GNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGG-GDWGGNGGGG 164

Query: 775 NKXSEPRGACQGGXARXXLXSG 710
                 RG   GG A   +  G
Sbjct: 165 RGGGGGRGGGGGGGAGERIAEG 186


>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 77 protein.
          Length = 1004

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = +1

Query: 883 RFXXXXPPPXSGPXXAPXPPPXXXP 957
           RF    PPP S P  AP PPP   P
Sbjct: 15  RFRKQPPPPPS-PRRAPPPPPHRKP 38


>AL110484-17|CAB54408.1|  586|Caenorhabditis elegans Hypothetical
           protein Y38E10A.17 protein.
          Length = 586

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 21/71 (29%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
 Frame = -2

Query: 850 GGSPXASPXGXKGGTGXAGXXXRXGNKXSEPRGACQGGXARXXLXSGRXSPPXD--XSVD 677
           GGS  A P G  GG   AG   R   +     G   GG A     S       +   SV 
Sbjct: 513 GGSVFAKPSGTGGGYVSAGSSARKSGESGAGGGGAGGGKAGGAKNSASYGSSANEVKSVG 572

Query: 676 FXDXRQGGGAY 644
           F   + GG  +
Sbjct: 573 FGAQQYGGSVF 583


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,312,833
Number of Sequences: 27780
Number of extensions: 157805
Number of successful extensions: 1200
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2496624284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)