Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_K09
(850 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 231 5e-61
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 231 5e-61
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 153 2e-37
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 152 3e-37
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 152 3e-37
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 99 3e-21
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 85 5e-17
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 73 3e-13
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 66 2e-11
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 66 2e-11
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 47 1e-05
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 46 4e-05
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 45 6e-05
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 44 2e-04
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 42 6e-04
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 42 6e-04
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 40 0.002
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 38 0.012
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 35 0.064
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 35 0.064
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 35 0.064
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 34 0.11
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 34 0.11
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 29 3.2
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 29 5.5
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 28 7.3
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 28 7.3
Z99281-7|CAC42379.1| 77|Caenorhabditis elegans Hypothetical pr... 28 9.6
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 28 9.6
Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical pr... 28 9.6
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 231 bits (565), Expect = 5e-61
Identities = 108/121 (89%), Positives = 114/121 (94%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 2 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 288 QKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNL 467
QKESTLHLVLRLRGG IEPSLR LA KYNC+K ICRKCYARL PRA+NCRK KCGH++ L
Sbjct: 62 QKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSEL 121
Query: 468 R 470
R
Sbjct: 122 R 122
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 231 bits (565), Expect = 5e-61
Identities = 108/121 (89%), Positives = 114/121 (94%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 2 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 288 QKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNL 467
QKESTLHLVLRLRGG IEPSLR LA KYNC+K ICRKCYARL PRA+NCRK KCGH++ L
Sbjct: 62 QKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSEL 121
Query: 468 R 470
R
Sbjct: 122 R 122
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 153 bits (371), Expect = 2e-37
Identities = 74/77 (96%), Positives = 76/77 (98%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 762 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 821
Query: 288 QKESTLHLVLRLRGGTI 338
QKESTLHLVLRLRGG I
Sbjct: 822 QKESTLHLVLRLRGGDI 838
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 2 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 62 QKESTLHLVLRLRGG 76
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 78 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 138 QKESTLHLVLRLRGG 152
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 154 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 214 QKESTLHLVLRLRGG 228
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 230 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 290 QKESTLHLVLRLRGG 304
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 306 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 366 QKESTLHLVLRLRGG 380
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 458 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 517
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 518 QKESTLHLVLRLRGG 532
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 534 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 593
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 594 QKESTLHLVLRLRGG 608
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 610 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 669
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 670 QKESTLHLVLRLRGG 684
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 686 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 745
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 746 QKESTLHLVLRLRGG 760
Score = 149 bits (362), Expect = 2e-36
Identities = 72/75 (96%), Positives = 74/75 (98%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTL GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 382 QIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 441
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 442 QKESTLHLVLRLRGG 456
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 2 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 62 QKESTLHLVLRLRGG 76
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 78 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 138 QKESTLHLVLRLRGG 152
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 154 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 214 QKESTLHLVLRLRGG 228
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 230 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 290 QKESTLHLVLRLRGG 304
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 306 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 366 QKESTLHLVLRLRGG 380
Score = 149 bits (362), Expect = 2e-36
Identities = 72/75 (96%), Positives = 74/75 (98%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTL GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 382 QIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 441
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 442 QKESTLHLVLRLRGG 456
Score = 93.5 bits (222), Expect = 2e-19
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 245
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG
Sbjct: 458 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 2 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 62 QKESTLHLVLRLRGG 76
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 78 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 138 QKESTLHLVLRLRGG 152
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 154 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 214 QKESTLHLVLRLRGG 228
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 230 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 290 QKESTLHLVLRLRGG 304
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 306 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 366 QKESTLHLVLRLRGG 380
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 382 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 441
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 442 QKESTLHLVLRLRGG 456
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 458 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 517
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 518 QKESTLHLVLRLRGG 532
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 534 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 593
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 594 QKESTLHLVLRLRGG 608
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 610 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 669
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 670 QKESTLHLVLRLRGG 684
Score = 152 bits (368), Expect = 3e-37
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 686 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 745
Query: 288 QKESTLHLVLRLRGG 332
QKESTLHLVLRLRGG
Sbjct: 746 QKESTLHLVLRLRGG 760
Score = 152 bits (368), Expect = 3e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
Sbjct: 762 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 821
Query: 288 QKESTLHLVLRLRGGTI 338
QK+STLHLVLRLRGG I
Sbjct: 822 QKQSTLHLVLRLRGGDI 838
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 99.1 bits (236), Expect = 3e-21
Identities = 44/72 (61%), Positives = 56/72 (77%)
Frame = +3
Query: 117 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 296
VKTLTGK I L++E +D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY +
Sbjct: 5 VKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGG 64
Query: 297 STLHLVLRLRGG 332
S LHLVL LRGG
Sbjct: 65 SVLHLVLALRGG 76
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 85.4 bits (202), Expect = 5e-17
Identities = 40/72 (55%), Positives = 52/72 (72%)
Frame = +3
Query: 111 VFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290
V VKTL GKTI + ++ +DT+E +K K+Q+K G+PPDQQRLIF QLE+ R L YNI+
Sbjct: 163 VSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYNIR 222
Query: 291 KESTLHLVLRLR 326
E +HLV R R
Sbjct: 223 DEDIIHLVSRHR 234
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +3
Query: 126 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 305
+TG IT VEASD I+++ K+ + + P ++ +D RT+SDYNI+ STL
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 306 HL 311
L
Sbjct: 152 RL 153
Score = 32.7 bits (71), Expect = 0.34
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +3
Query: 117 VKTLTGKTITLEVEASDTIENVKAKIQDKEGI 212
VKT TGKTIT+E +NVK +++DK+G+
Sbjct: 63 VKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 215
++FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP
Sbjct: 2 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 66.5 bits (155), Expect = 2e-11
Identities = 36/74 (48%), Positives = 52/74 (70%)
Frame = +3
Query: 111 VFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290
VFVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 291 KESTLHLVLRLRGG 332
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 66.5 bits (155), Expect = 2e-11
Identities = 36/74 (48%), Positives = 52/74 (70%)
Frame = +3
Query: 111 VFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290
VFVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 291 KESTLHLVLRLRGG 332
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/71 (38%), Positives = 43/71 (60%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 287
++FVK L G + ++ DT+ ++K I+ + IP L F+GK+LED ++ DYNI
Sbjct: 155 QIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNI 213
Query: 288 QKESTLHLVLR 320
QK ST+ + R
Sbjct: 214 QKSSTITMYFR 224
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Frame = +3
Query: 108 KVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE---DGRTLSD 278
+++V+ G+T TL+ ASDT+ +VKAKI +K I P+ Q+L+ L+ D TL D
Sbjct: 104 RIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLFD 162
Query: 279 YNIQKESTLHL 311
+ + STL L
Sbjct: 163 NSFENGSTLRL 173
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 117 VKTLTGKTITLEVEASDTIENVKAKIQDKEGI 212
+KT TGK IT+E S VK +++DK+G+
Sbjct: 5 IKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/46 (47%), Positives = 34/46 (73%)
Frame = +3
Query: 111 VFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 248
VFVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 45.2 bits (102), Expect = 6e-05
Identities = 28/70 (40%), Positives = 37/70 (52%)
Frame = +3
Query: 114 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 293
FV+ L GKT TL V ASDT+E K ++ R+ + GK L D T +YNI
Sbjct: 46 FVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNISN 100
Query: 294 ESTLHLVLRL 323
ST+ L R+
Sbjct: 101 NSTMDLHFRI 110
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/61 (40%), Positives = 31/61 (50%)
Frame = +3
Query: 129 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 308
+G L V SDTI VK I + R++ K LED TL+ YNIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 309 L 311
L
Sbjct: 241 L 241
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 41.9 bits (94), Expect = 6e-04
Identities = 17/69 (24%), Positives = 40/69 (57%)
Frame = +3
Query: 126 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 305
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 306 HLVLRLRGG 332
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 41.9 bits (94), Expect = 6e-04
Identities = 17/69 (24%), Positives = 40/69 (57%)
Frame = +3
Query: 126 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 305
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 306 HLVLRLRGG 332
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +3
Query: 147 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 326
L V SDTI ++K +I + R++ GK LED +L+ YNIQ+ + + L L+
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +3
Query: 147 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 305
L V SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 37.5 bits (83), Expect = 0.012
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +3
Query: 111 VFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYN 284
V +TLT LE+ TI VKA + ++G P+ Q+LI+ GK L+D + +
Sbjct: 54 VTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDDSVKVGEVG 113
Query: 285 IQKESTLHLVLRLRGGT-IEPS 347
+ ++L R T + PS
Sbjct: 114 FDSSKFVVVMLSKRKVTEVAPS 135
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 35.1 bits (77), Expect = 0.064
Identities = 18/66 (27%), Positives = 39/66 (59%)
Frame = +3
Query: 123 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 302
++ G+ ++ +++E +K KI+ + GIP + L GK L D + L+DY + +++
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY--KWDTS 206
Query: 303 LHLVLR 320
+ L++R
Sbjct: 207 VELLVR 212
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 35.1 bits (77), Expect = 0.064
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = +3
Query: 99 TQCKVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 278
T +V +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 19 TTIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQA 78
Query: 279 YNIQKESTLHLVLR 320
I T+HLV R
Sbjct: 79 AGISDGQTVHLVDR 92
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 35.1 bits (77), Expect = 0.064
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = +3
Query: 99 TQCKVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 278
T +V +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 19 TTIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQA 78
Query: 279 YNIQKESTLHLVLR 320
I T+HLV R
Sbjct: 79 AGISDGQTVHLVDR 92
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/65 (23%), Positives = 33/65 (50%)
Frame = +3
Query: 120 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 299
KT + +TL + + IE++ ++ IP D+ ++F GK+L + D ++ +
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPAT 72
Query: 300 TLHLV 314
+ L+
Sbjct: 73 QIMLL 77
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/72 (30%), Positives = 37/72 (51%)
Frame = +3
Query: 90 IGATQCKVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 269
IG+ K F L G I +E+++ DTI V + G+ +QRL+ K+L+ +T
Sbjct: 178 IGSKNIK-FNVILHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQT 236
Query: 270 LSDYNIQKESTL 305
L + I+ S +
Sbjct: 237 LEEAGIKDGSVI 248
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 390 CRKCYARLHPRATNCRKTKCGHT 458
CR CY H + R +CGHT
Sbjct: 63 CRVCYDEYHSSSNQARVLQCGHT 85
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 147 LEVEASDTIENVKAKIQDK-EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 323
+EV S I V+ K+ + + L + G++L+D R++ YNI + ++L +
Sbjct: 100 VEVRNSYLIRYVRVKVANLLNNDLVESFNLYYGGQKLQDNRSIGSYNIDQSREIYLKKKK 159
Query: 324 RGGTI 338
+ T+
Sbjct: 160 KLSTL 164
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/57 (22%), Positives = 29/57 (50%)
Frame = +3
Query: 90 IGATQCKVFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 260
IG +V + + TGK++ + VE + +E D+EG+ L+ + ++ ++
Sbjct: 1144 IGEDVLQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 28.3 bits (60), Expect = 7.3
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 117 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDYNIQK 293
+KT TGKTIT+E S VK +++ K+G+ AG Q +E T+ D IQ+
Sbjct: 5 IKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDVKIQE 59
>Z99281-7|CAC42379.1| 77|Caenorhabditis elegans Hypothetical
protein Y57G11C.9c protein.
Length = 77
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 122 NPYGEDHYIGGGSFRHYRKCQS*NPRQGRYSSRP 223
N YG +++ GGG FRH + N Y++ P
Sbjct: 5 NNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 122 NPYGEDHYIGGGSFRHYRKCQS*NPRQGRYSSRP 223
N YG +++ GGG FRH + N Y++ P
Sbjct: 5 NNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38
>Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical
protein Y57G11C.9a protein.
Length = 553
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 122 NPYGEDHYIGGGSFRHYRKCQS*NPRQGRYSSRP 223
N YG +++ GGG FRH + N Y++ P
Sbjct: 5 NNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,692,312
Number of Sequences: 27780
Number of extensions: 288045
Number of successful extensions: 783
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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