Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_K08
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1226 + 25394106-25394168,25394243-25394396,25394548-253946...   254   7e-68
01_06_0638 - 30768546-30768779,30768908-30769017,30769301-307694...    51   2e-15
01_01_0336 + 2712412-2712576,2713663-2713738,2713840-2713898,271...    74   2e-13
03_05_1094 - 30348366-30348467,30348571-30348753,30348833-303489...    35   0.099
11_01_0569 + 4515722-4515733,4517579-4517701,4517812-4517934,452...    31   0.93 
11_03_0112 - 10135052-10135168,10135712-10135795,10135879-101359...    29   3.7  
08_02_0232 - 14584952-14586451                                         29   3.7  
02_01_0317 - 2128660-2128776,2129281-2129364,2129463-2129543,213...    29   3.7  
11_07_0018 - 27458523-27458541,27458722-27458864                       29   4.9  
09_02_0263 + 6416010-6416152,6416333-6416351                           29   4.9  
10_08_0851 - 21065832-21065948,21066361-21066705,21067181-210674...    29   6.5  

>08_02_1226 +
           25394106-25394168,25394243-25394396,25394548-25394664,
           25395541-25395607,25395701-25395828,25396327-25396460,
           25396552-25396650,25396780-25396902
          Length = 294

 Score =  254 bits (622), Expect = 7e-68
 Identities = 113/244 (46%), Positives = 159/244 (65%), Gaps = 1/244 (0%)
 Frame = +3

Query: 153 LLLQKHSDYLASYGLNKDDYXYCMTEYLRMSGIYWSLTAMELMGQSSRMPKEDIIEFITQ 332
           L  +KH  Y+ +    KD +   + E++R++G YW LT ++L+ +   +  +++IE+I  
Sbjct: 7   LAAEKHVRYIVTVEKRKDSFESLVMEHIRLNGAYWGLTTLDLLHKLRAVEADEVIEWIMS 66

Query: 333 CQDSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGD 512
           C   ESGG   ++GHD H+LYTLSAVQVL ++DRLDA+D++ +  YI  LQ EDGSF GD
Sbjct: 67  CYHPESGGFGGNVGHDAHVLYTLSAVQVLCLFDRLDALDVDKVADYIAGLQNEDGSFSGD 126

Query: 513 KWGEIDTRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYC 692
            WGE+DTRFS+ A+  LSLL RL+ I++ K V++++SC N DGGFG+ PG       ++C
Sbjct: 127 IWGEVDTRFSYIAICTLSLLHRLEKINVQKAVDYIVSCKNLDGGFGAMPG-------VFC 179

Query: 693 CVGTLSICKRMDALHADELAWWLCERQLPSGGLNGRPEKLPXLCYSXXXM-SXFQC*INH 869
           CVG L+I   +  +  D L WWLCERQ   GGLNGRPEKL  +CYS   + S       H
Sbjct: 180 CVGALAITGSLHHIDRDLLGWWLCERQCKEGGLNGRPEKLADVCYSWWVLSSLIMIDRVH 239

Query: 870 WVTK 881
           W+ K
Sbjct: 240 WIDK 243



 Score = 34.7 bits (76), Expect = 0.099
 Identities = 13/37 (35%), Positives = 25/37 (67%)
 Frame = +3

Query: 252 YWSLTAMELMGQSSRMPKEDIIEFITQCQDSESGGIS 362
           +W L+++ ++ +   + K+ + +FI  CQD E+GGIS
Sbjct: 226 WWVLSSLIMIDRVHWIDKDKLAKFILNCQDKENGGIS 262



 Score = 29.9 bits (64), Expect = 2.8
 Identities = 17/92 (18%), Positives = 45/92 (48%)
 Frame = +3

Query: 240 MSGIYWSLTAMELMGQSSRMPKEDIIEFITQCQDSESGGISASIGHDPHILYTLSAVQVL 419
           M G++  + A+ + G    + ++ +  ++ + Q  E GG++        + Y+   +  L
Sbjct: 174 MPGVFCCVGALAITGSLHHIDRDLLGWWLCERQCKE-GGLNGRPEKLADVCYSWWVLSSL 232

Query: 420 AMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDK 515
            M DR+  +D + + ++I++ Q ++     D+
Sbjct: 233 IMIDRVHWIDKDKLAKFILNCQDKENGGISDR 264


>01_06_0638 -
           30768546-30768779,30768908-30769017,30769301-30769490,
           30769842-30769914,30770007-30770063,30770147-30770211,
           30770278-30770488,30770568-30770650,30771123-30771158,
           30771611-30771713,30771813-30771899,30772210-30772403
          Length = 480

 Score = 51.2 bits (117), Expect(2) = 2e-15
 Identities = 22/72 (30%), Positives = 37/72 (51%)
 Frame = +3

Query: 519 GEIDTRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCV 698
           GEID R S+ A+   SL+  LD         ++  C  ++GG   +P +E+H G  +C +
Sbjct: 226 GEIDVRASYTAISVASLVNILDGELAKGVGNYITRCQTYEGGIAGEPYAEAHGGYTFCGL 285

Query: 699 GTLSICKRMDAL 734
            T+ +   +D L
Sbjct: 286 ATMILLNEVDKL 297



 Score = 49.2 bits (112), Expect(2) = 2e-15
 Identities = 29/117 (24%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
 Frame = +3

Query: 162 QKHSDYLASYGLNKDDYXYCMTEYLRMSGIYWSLTAMELMGQSSRMPKEDIIEFITQCQD 341
           ++H +YL   GL      + + +  R    YW + A+ L+ +     ++DI++F+++CQD
Sbjct: 71  EQHVEYLTR-GLKHLGPSFHVLDANRPWLCYWIIHALALLDEIPDDVEDDIVDFLSRCQD 129

Query: 342 SESGGISASIGHDPHILYTLSAVQVLAMYD---RLDAVDIEGIVRYIVSLQQEDGSF 503
            + GG     G  PH+  T +AV  L        L +V+ + + ++++ ++   G+F
Sbjct: 130 KD-GGYGGGPGQLPHLATTYAAVNTLVTIGSERALSSVNRDNLYKFMLRMKDTSGAF 185



 Score = 35.9 bits (79), Expect = 0.043
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +3

Query: 552 VMCLSLLQRLDAIDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTL 707
           +  L+LL  +     +  V+F+  C + DGG+G  PG   H    Y  V TL
Sbjct: 103 IHALALLDEIPDDVEDDIVDFLSRCQDKDGGYGGGPGQLPHLATTYAAVNTL 154



 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = +3

Query: 321 FITQCQDSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDIEGIV 464
           +IT+CQ  E GGI+     + H  YT   +  + + + +D +D+  ++
Sbjct: 257 YITRCQTYE-GGIAGEPYAEAHGGYTFCGLATMILLNEVDKLDLASLI 303


>01_01_0336 +
           2712412-2712576,2713663-2713738,2713840-2713898,
           2714009-2714148,2714690-2714745,2714832-2714908,
           2715007-2715075
          Length = 213

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
 Frame = +3

Query: 384 HILYTLSAVQVLAM--YDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWG-EIDTRFSFCAV 554
           H+  T SA+ +L +  YD L  +D + ++  + +LQQ DGSF     G E D RF +CA 
Sbjct: 108 HLASTYSALAILKIVGYD-LANIDNKVLLSSMRNLQQPDGSFMPTHIGAETDLRFVYCAA 166

Query: 555 MCLSLLQRLDAIDINKTVEFVLSCMNFDGGFGSKPGSESH 674
              S+L+    +D  K  +++LSC ++DGGFG  PGSESH
Sbjct: 167 AICSMLKDWTGMDKEKAKQYILSCQSYDGGFGLVPGSESH 206



 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/89 (19%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
 Frame = +3

Query: 240 MSGIYWSLTAMELMGQS-SRMPKEDIIEFITQCQDSESGGISASIGHDPHILYTLSAVQV 416
           ++  Y +L  ++++G   + +  + ++  +   Q  +   +   IG +  + +   A  +
Sbjct: 109 LASTYSALAILKIVGYDLANIDNKVLLSSMRNLQQPDGSFMPTHIGAETDLRFVYCAAAI 168

Query: 417 LAMYDRLDAVDIEGIVRYIVSLQQEDGSF 503
            +M      +D E   +YI+S Q  DG F
Sbjct: 169 CSMLKDWTGMDKEKAKQYILSCQSYDGGF 197


>03_05_1094 - 30348366-30348467,30348571-30348753,30348833-30348934,
            30349617-30349967,30350049-30350276,30350353-30350509,
            30351189-30351370,30351443-30351866,30351949-30352892,
            30353509-30353773,30354558-30355120
          Length = 1166

 Score = 34.7 bits (76), Expect = 0.099
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = -3

Query: 795  HSDHHWAAVVHIATTPARLRVGRPCACISTVYPHSSKLDQHGFPIQVWN 649
            HS  H   + H+ T P  + VG PC     V       +Q+G  + +W+
Sbjct: 996  HSLSHTCCIAHLGTYPPNVCVGTPCWMAPEVLRAMRDKNQYGLEVDIWS 1044


>11_01_0569 +
           4515722-4515733,4517579-4517701,4517812-4517934,
           4520422-4520520,4520649-4520705,4521421-4521533,
           4521633-4521810,4523684-4523764,4523837-4523920,
           4525429-4525437
          Length = 292

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +3

Query: 468 YIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRL--DAIDINKTVEFVLSCMNFDG 641
           +I S Q+ DGS+YG  WG   T  ++ AV  L    R   ++  + K  +F+LS     G
Sbjct: 165 FIESSQRSDGSWYG-SWGICFTYATWFAVTGLVSAGRTLGNSATVRKACDFLLSKQLPSG 223

Query: 642 GFG 650
           G+G
Sbjct: 224 GWG 226


>11_03_0112 -
           10135052-10135168,10135712-10135795,10135879-10135953,
           10137801-10137978,10138048-10138212,10138291-10138337,
           10140233-10140301,10140531-10140629,10141256-10141375,
           10141459-10141581,10149251-10149364,10150725-10150913,
           10151058-10151110,10151365-10151470,10151957-10152085
          Length = 555

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 16/106 (15%)
 Frame = +3

Query: 381 PHILYTLSAVQVLAMYDRL----DAVDIEGIVR----YIVSLQQEDGSFYG------DKW 518
           PH+  T SA+Q L  +  L      V+IE  ++    +I + QQ DGS+Y         W
Sbjct: 350 PHVECTSSAIQGLISFTELYPGYRGVEIESCIKNAVMFIENKQQNDGSWYAKFNARYGTW 409

Query: 519 GEIDTRFSFCAVMCLSLLQR--LDAIDINKTVEFVLSCMNFDGGFG 650
           G   T  +F A+  L    R   ++  I    +F+LS     GG+G
Sbjct: 410 GICFTYGAFFAIRGLIAAGRNYENSQAIRNGCKFLLSKQLSAGGWG 455


>08_02_0232 - 14584952-14586451
          Length = 499

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = +2

Query: 608 GVCAQLHEL*WWIWFQTWIGKPCWSNLLLCGYTV 709
           G C Q      W+W   WIG PC + L L   TV
Sbjct: 148 GCCLQEVTTAEWLWEWDWIGYPCLTTLRLRRCTV 181


>02_01_0317 -
           2128660-2128776,2129281-2129364,2129463-2129543,
           2130230-2130407,2130530-2130673,2130780-2130826,
           2131149-2131205,2131989-2132087,2132301-2132423,
           2132514-2132636,2132859-2132972,2133612-2133800,
           2134408-2134574,2134707-2134791,2134891-2135085,
           2135162-2135251,2135418-2135603,2135885-2135959,
           2136757-2136957
          Length = 784

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
 Frame = +3

Query: 381 PHILYTLSAVQVLAMYDRL------DAVD--IEGIVRYIVSLQQEDGSFYGDKWGEIDTR 536
           P++  T +A+Q L  + +L        +D  I     +I  +Q+ DGS+YG  W    T 
Sbjct: 584 PYVECTSAAIQALTAFKKLYPGHRKSEIDNCISKAASFIEGIQKSDGSWYG-SWAVCFTY 642

Query: 537 FSFCAVMCLSLLQRL--DAIDINKTVEFVLSCMNFDGGFG 650
            ++  V  L    R   ++  I K  +F+LS     GG+G
Sbjct: 643 GTWFGVKGLVAAGRTFKNSPAIRKACDFLLSKELPSGGWG 682


>11_07_0018 - 27458523-27458541,27458722-27458864
          Length = 53

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 441 AVDIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFS 542
           A+  + +V Y+ + Q+  G    DKW E+D R S
Sbjct: 3   AMSADNLVIYVATTQRGGGQQEWDKWNELDMRTS 36


>09_02_0263 + 6416010-6416152,6416333-6416351
          Length = 53

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 441 AVDIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFS 542
           A+  + +V Y+ + Q+  G    DKW E+D R S
Sbjct: 3   AMSADNLVIYVATTQRGGGQQEWDKWNELDMRTS 36


>10_08_0851 -
           21065832-21065948,21066361-21066705,21067181-21067489,
           21067574-21067648,21067754-21067917,21067994-21068432
          Length = 482

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 702 TLSICKRMDALHADELAWWLCERQLPSGGLNGRPEK 809
           T+S      + H +E  WWL    +P GG++G+  K
Sbjct: 255 TMSSSSFRRSTHRNEDRWWLPVPCVPDGGISGKARK 290


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,443,584
Number of Sequences: 37544
Number of extensions: 463037
Number of successful extensions: 1310
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1304
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)