Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_K08
(881 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X98001-1|CAA66638.1| 331|Homo sapiens geranylgeranyl transferas... 364 e-100
CR456941-1|CAG33222.1| 331|Homo sapiens RABGGTB protein. 364 e-100
BC020790-1|AAH20790.1| 331|Homo sapiens Rab geranylgeranyltrans... 364 e-100
AL357314-5|CAI22393.1| 331|Homo sapiens Rab geranylgeranyltrans... 364 e-100
AB209023-1|BAD92260.1| 320|Homo sapiens Rab geranylgeranyltrans... 364 e-100
U49245-1|AAA91473.1| 331|Homo sapiens geranylgeranyl transferas... 363 e-100
Y08201-1|CAA69383.1| 331|Homo sapiens rab geranylgeranyl transf... 360 4e-99
AL357314-4|CAI22392.1| 152|Homo sapiens Rab geranylgeranyltrans... 196 7e-50
L10414-1|AAA86286.1| 387|Homo sapiens farnesyl-protein transfer... 128 2e-29
L00635-1|AAA35854.1| 437|Homo sapiens farnesyl-protein transfer... 128 2e-29
BC020232-1|AAH20232.1| 437|Homo sapiens farnesyltransferase, CA... 128 2e-29
L25441-1|AAA35888.1| 377|Homo sapiens geranylgeranyltransferase... 75 3e-13
>X98001-1|CAA66638.1| 331|Homo sapiens geranylgeranyl transferase
II protein.
Length = 331
Score = 364 bits (896), Expect = e-100
Identities = 161/254 (63%), Positives = 200/254 (78%), Gaps = 1/254 (0%)
Frame = +3
Query: 123 VVLKAARPKTLLLQKHSDYLASYGLNKDDYXYCMTEYLRMSGIYWSLTAMELMGQSSRMP 302
V++K+ P TLLL+KH+DY+ASYG KDDY YCM+EYLRMSGIYW LT M+LMGQ RM
Sbjct: 8 VIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMN 67
Query: 303 KEDIIEFITQCQDSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDIEGIVRYIVSL 482
+E+I+ FI CQ E GGISASIGHDPH+LYTLSAVQ+L +YD ++ +D+ +V Y+ L
Sbjct: 68 REEILAFIKSCQH-ECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVVEYVKGL 126
Query: 483 QQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDGGFGSKPG 662
Q+EDGSF GD WGEIDTRFSFCAV L+LL +LDAI++ K +EFVLSCMNFDGGFG +PG
Sbjct: 127 QKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPG 186
Query: 663 SESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQLPSGGLNGRPEKLPXLCYSXXXM 842
SESHAG IYCC G L+I ++ +++D L WWLCERQLPSGGLNGRPEKLP +CYS +
Sbjct: 187 SESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVL 246
Query: 843 SXFQC*IN-HWVTK 881
+ + HW+ +
Sbjct: 247 ASLKIIGRLHWIDR 260
Score = 37.9 bits (84), Expect = 0.048
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +3
Query: 252 YWSLTAMELMGQSSRMPKEDIIEFITQCQDSESGGISASIGH--DP-HILYTLSAVQVL 419
+W L +++++G+ + +E + FI CQD E+GG + G DP H L+ ++ + +L
Sbjct: 243 WWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLL 301
>CR456941-1|CAG33222.1| 331|Homo sapiens RABGGTB protein.
Length = 331
Score = 364 bits (896), Expect = e-100
Identities = 161/254 (63%), Positives = 200/254 (78%), Gaps = 1/254 (0%)
Frame = +3
Query: 123 VVLKAARPKTLLLQKHSDYLASYGLNKDDYXYCMTEYLRMSGIYWSLTAMELMGQSSRMP 302
V++K+ P TLLL+KH+DY+ASYG KDDY YCM+EYLRMSGIYW LT M+LMGQ RM
Sbjct: 8 VIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMN 67
Query: 303 KEDIIEFITQCQDSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDIEGIVRYIVSL 482
+E+I+ FI CQ E GGISASIGHDPH+LYTLSAVQ+L +YD ++ +D+ +V Y+ L
Sbjct: 68 REEILAFIKSCQH-ECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVVEYVKGL 126
Query: 483 QQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDGGFGSKPG 662
Q+EDGSF GD WGEIDTRFSFCAV L+LL +LDAI++ K +EFVLSCMNFDGGFG +PG
Sbjct: 127 QKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPG 186
Query: 663 SESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQLPSGGLNGRPEKLPXLCYSXXXM 842
SESHAG IYCC G L+I ++ +++D L WWLCERQLPSGGLNGRPEKLP +CYS +
Sbjct: 187 SESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVL 246
Query: 843 SXFQC*IN-HWVTK 881
+ + HW+ +
Sbjct: 247 ASLKIIGRLHWIDR 260
Score = 37.9 bits (84), Expect = 0.048
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +3
Query: 252 YWSLTAMELMGQSSRMPKEDIIEFITQCQDSESGGISASIGH--DP-HILYTLSAVQVL 419
+W L +++++G+ + +E + FI CQD E+GG + G DP H L+ ++ + +L
Sbjct: 243 WWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLL 301
>BC020790-1|AAH20790.1| 331|Homo sapiens Rab
geranylgeranyltransferase, beta subunit protein.
Length = 331
Score = 364 bits (896), Expect = e-100
Identities = 161/254 (63%), Positives = 200/254 (78%), Gaps = 1/254 (0%)
Frame = +3
Query: 123 VVLKAARPKTLLLQKHSDYLASYGLNKDDYXYCMTEYLRMSGIYWSLTAMELMGQSSRMP 302
V++K+ P TLLL+KH+DY+ASYG KDDY YCM+EYLRMSGIYW LT M+LMGQ RM
Sbjct: 8 VIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMN 67
Query: 303 KEDIIEFITQCQDSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDIEGIVRYIVSL 482
+E+I+ FI CQ E GGISASIGHDPH+LYTLSAVQ+L +YD ++ +D+ +V Y+ L
Sbjct: 68 REEILAFIKSCQH-ECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVVEYVKGL 126
Query: 483 QQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDGGFGSKPG 662
Q+EDGSF GD WGEIDTRFSFCAV L+LL +LDAI++ K +EFVLSCMNFDGGFG +PG
Sbjct: 127 QKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPG 186
Query: 663 SESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQLPSGGLNGRPEKLPXLCYSXXXM 842
SESHAG IYCC G L+I ++ +++D L WWLCERQLPSGGLNGRPEKLP +CYS +
Sbjct: 187 SESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVL 246
Query: 843 SXFQC*IN-HWVTK 881
+ + HW+ +
Sbjct: 247 ASLKIIGRLHWIDR 260
Score = 37.9 bits (84), Expect = 0.048
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +3
Query: 252 YWSLTAMELMGQSSRMPKEDIIEFITQCQDSESGGISASIGH--DP-HILYTLSAVQVL 419
+W L +++++G+ + +E + FI CQD E+GG + G DP H L+ ++ + +L
Sbjct: 243 WWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLL 301
>AL357314-5|CAI22393.1| 331|Homo sapiens Rab
geranylgeranyltransferase, beta subunit protein.
Length = 331
Score = 364 bits (896), Expect = e-100
Identities = 161/254 (63%), Positives = 200/254 (78%), Gaps = 1/254 (0%)
Frame = +3
Query: 123 VVLKAARPKTLLLQKHSDYLASYGLNKDDYXYCMTEYLRMSGIYWSLTAMELMGQSSRMP 302
V++K+ P TLLL+KH+DY+ASYG KDDY YCM+EYLRMSGIYW LT M+LMGQ RM
Sbjct: 8 VIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMN 67
Query: 303 KEDIIEFITQCQDSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDIEGIVRYIVSL 482
+E+I+ FI CQ E GGISASIGHDPH+LYTLSAVQ+L +YD ++ +D+ +V Y+ L
Sbjct: 68 REEILAFIKSCQH-ECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVVEYVKGL 126
Query: 483 QQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDGGFGSKPG 662
Q+EDGSF GD WGEIDTRFSFCAV L+LL +LDAI++ K +EFVLSCMNFDGGFG +PG
Sbjct: 127 QKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPG 186
Query: 663 SESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQLPSGGLNGRPEKLPXLCYSXXXM 842
SESHAG IYCC G L+I ++ +++D L WWLCERQLPSGGLNGRPEKLP +CYS +
Sbjct: 187 SESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVL 246
Query: 843 SXFQC*IN-HWVTK 881
+ + HW+ +
Sbjct: 247 ASLKIIGRLHWIDR 260
Score = 37.9 bits (84), Expect = 0.048
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +3
Query: 252 YWSLTAMELMGQSSRMPKEDIIEFITQCQDSESGGISASIGH--DP-HILYTLSAVQVL 419
+W L +++++G+ + +E + FI CQD E+GG + G DP H L+ ++ + +L
Sbjct: 243 WWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLL 301
>AB209023-1|BAD92260.1| 320|Homo sapiens Rab
geranylgeranyltransferase, beta subunit variant protein.
Length = 320
Score = 364 bits (896), Expect = e-100
Identities = 161/254 (63%), Positives = 200/254 (78%), Gaps = 1/254 (0%)
Frame = +3
Query: 123 VVLKAARPKTLLLQKHSDYLASYGLNKDDYXYCMTEYLRMSGIYWSLTAMELMGQSSRMP 302
V++K+ P TLLL+KH+DY+ASYG KDDY YCM+EYLRMSGIYW LT M+LMGQ RM
Sbjct: 8 VIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMN 67
Query: 303 KEDIIEFITQCQDSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDIEGIVRYIVSL 482
+E+I+ FI CQ E GGISASIGHDPH+LYTLSAVQ+L +YD ++ +D+ +V Y+ L
Sbjct: 68 REEILAFIKSCQH-ECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVVEYVKGL 126
Query: 483 QQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDGGFGSKPG 662
Q+EDGSF GD WGEIDTRFSFCAV L+LL +LDAI++ K +EFVLSCMNFDGGFG +PG
Sbjct: 127 QKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPG 186
Query: 663 SESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQLPSGGLNGRPEKLPXLCYSXXXM 842
SESHAG IYCC G L+I ++ +++D L WWLCERQLPSGGLNGRPEKLP +CYS +
Sbjct: 187 SESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVL 246
Query: 843 SXFQC*IN-HWVTK 881
+ + HW+ +
Sbjct: 247 ASLKIIGRLHWIDR 260
Score = 38.3 bits (85), Expect = 0.036
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +3
Query: 252 YWSLTAMELMGQSSRMPKEDIIEFITQCQDSESGGISASIGHDPHILY 395
+W L +++++G+ + +E + FI CQD E+GG + G D H +Y
Sbjct: 243 WWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPG-DMHFIY 289
>U49245-1|AAA91473.1| 331|Homo sapiens geranylgeranyl transferase
type II beta-subunit protein.
Length = 331
Score = 363 bits (892), Expect = e-100
Identities = 160/254 (62%), Positives = 199/254 (78%), Gaps = 1/254 (0%)
Frame = +3
Query: 123 VVLKAARPKTLLLQKHSDYLASYGLNKDDYXYCMTEYLRMSGIYWSLTAMELMGQSSRMP 302
V++K+ P TLLL+KH+DY+ASYG KDDY YCM+EYLRMSGIYW LT M+LMGQ RM
Sbjct: 8 VIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMN 67
Query: 303 KEDIIEFITQCQDSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDIEGIVRYIVSL 482
+E+I+ FI CQ E GGISASIGHDPH+LYTLSAVQ+L +YD ++ +D+ +V Y+ L
Sbjct: 68 REEILAFIKSCQH-ECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVVEYVKGL 126
Query: 483 QQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDGGFGSKPG 662
Q+EDGSF GD WGEIDTRFSFCAV +LL +LDAI++ K +EFVLSCMNFDGGFG +PG
Sbjct: 127 QKEDGSFAGDIWGEIDTRFSFCAVATFALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPG 186
Query: 663 SESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQLPSGGLNGRPEKLPXLCYSXXXM 842
SESHAG IYCC G L+I ++ +++D L WWLCERQLPSGGLNGRPEKLP +CYS +
Sbjct: 187 SESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVL 246
Query: 843 SXFQC*IN-HWVTK 881
+ + HW+ +
Sbjct: 247 ASLKIIGRLHWIDR 260
Score = 37.9 bits (84), Expect = 0.048
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +3
Query: 252 YWSLTAMELMGQSSRMPKEDIIEFITQCQDSESGGISASIGH--DP-HILYTLSAVQVL 419
+W L +++++G+ + +E + FI CQD E+GG + G DP H L+ ++ + +L
Sbjct: 243 WWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLL 301
>Y08201-1|CAA69383.1| 331|Homo sapiens rab geranylgeranyl
transferase protein.
Length = 331
Score = 360 bits (885), Expect = 4e-99
Identities = 160/254 (62%), Positives = 198/254 (77%), Gaps = 1/254 (0%)
Frame = +3
Query: 123 VVLKAARPKTLLLQKHSDYLASYGLNKDDYXYCMTEYLRMSGIYWSLTAMELMGQSSRMP 302
V++K+ P TLLL+KH+DY+ASYG KDDY YCM+EYLRMSGIYW LT M+LMGQ RM
Sbjct: 8 VIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMN 67
Query: 303 KEDIIEFITQCQDSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDIEGIVRYIVSL 482
+E+I+ FI CQ E GGISASIGHDPH+LYTLSAVQ+L +YD ++ +D+ +V Y+ L
Sbjct: 68 REEILAFIKSCQH-ECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVVEYVKGL 126
Query: 483 QQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDGGFGSKPG 662
Q+EDGSF GD WGEIDTRFSFCAV L+LL +LDAI++ K +EFVLSCMN DGGFG +PG
Sbjct: 127 QKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNSDGGFGCRPG 186
Query: 663 SESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQLPSGGLNGRPEKLPXLCYSXXXM 842
SESHAG IYCC G L+I ++ + +D L WWLCERQLPSGGLNGRPEKLP +CYS +
Sbjct: 187 SESHAGQIYCCTGFLAITSQLHQVTSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVL 246
Query: 843 SXFQC*IN-HWVTK 881
+ + HW+ +
Sbjct: 247 ASLKIIGRLHWIDR 260
Score = 37.9 bits (84), Expect = 0.048
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +3
Query: 252 YWSLTAMELMGQSSRMPKEDIIEFITQCQDSESGGISASIGH--DP-HILYTLSAVQVL 419
+W L +++++G+ + +E + FI CQD E+GG + G DP H L+ ++ + +L
Sbjct: 243 WWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLL 301
>AL357314-4|CAI22392.1| 152|Homo sapiens Rab
geranylgeranyltransferase, beta subunit protein.
Length = 152
Score = 196 bits (479), Expect = 7e-50
Identities = 88/140 (62%), Positives = 110/140 (78%)
Frame = +3
Query: 123 VVLKAARPKTLLLQKHSDYLASYGLNKDDYXYCMTEYLRMSGIYWSLTAMELMGQSSRMP 302
V++K+ P TLLL+KH+DY+ASYG KDDY YCM+EYLRMSGIYW LT M+LMGQ RM
Sbjct: 8 VIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMN 67
Query: 303 KEDIIEFITQCQDSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDIEGIVRYIVSL 482
+E+I+ FI CQ E GGISASIGHDPH+LYTLSAVQ+L +YD ++ +D+ +V Y+ L
Sbjct: 68 REEILAFIKSCQ-HECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVVEYVKGL 126
Query: 483 QQEDGSFYGDKWGEIDTRFS 542
Q+EDGSF GD WG + RFS
Sbjct: 127 QKEDGSFAGDIWGNV--RFS 144
Score = 41.1 bits (92), Expect = 0.005
Identities = 23/78 (29%), Positives = 38/78 (48%)
Frame = +3
Query: 414 VLAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDAID 593
V+ + +L ++ E I+ +I S Q E G + ++ AV L+L ++ ID
Sbjct: 56 VMDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVID 115
Query: 594 INKTVEFVLSCMNFDGGF 647
+NK VE+V DG F
Sbjct: 116 VNKVVEYVKGLQKEDGSF 133
>L10414-1|AAA86286.1| 387|Homo sapiens farnesyl-protein transferase
beta-subunit protein.
Length = 387
Score = 128 bits (310), Expect = 2e-29
Identities = 79/228 (34%), Positives = 114/228 (50%), Gaps = 5/228 (2%)
Frame = +3
Query: 162 QKHSDYLASYGLNKDDYXYCMTEYLRMSGIYWSLTAMELMGQS-SRMPKEDIIEFITQCQ 338
+KH YL GL + Y + R YW L ++EL+ + ++ D+ +F+ CQ
Sbjct: 26 EKHFHYLKR-GLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVCQFLELCQ 84
Query: 339 DSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDI---EGIVRYIVSLQQEDGSFYG 509
E GG G PH+ T +AV L + +A DI E +++Y+ SL+Q DGSF
Sbjct: 85 SPE-GGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSFLM 143
Query: 510 DKWGEIDTRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIY 689
GE+D R ++CA SL + T E++ C N++GG G PG E+H G +
Sbjct: 144 HVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTF 203
Query: 690 CCVGTLSICKRMDALHADELAWWLCERQ-LPSGGLNGRPEKLPXLCYS 830
C + L I KR +L+ L W+ RQ L GG GR KL CYS
Sbjct: 204 CGLAALVILKRERSLNLKSLLQWVTSRQMLFEGGFQGRCNKLVDGCYS 251
>L00635-1|AAA35854.1| 437|Homo sapiens farnesyl-protein transferase
beta-subunit protein.
Length = 437
Score = 128 bits (310), Expect = 2e-29
Identities = 78/228 (34%), Positives = 114/228 (50%), Gaps = 5/228 (2%)
Frame = +3
Query: 162 QKHSDYLASYGLNKDDYXYCMTEYLRMSGIYWSLTAMELMGQS-SRMPKEDIIEFITQCQ 338
+KH YL GL + Y + R YW L ++EL+ + ++ D+ +F+ CQ
Sbjct: 76 EKHFHYLKR-GLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVCQFLELCQ 134
Query: 339 DSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDI---EGIVRYIVSLQQEDGSFYG 509
E GG G PH+ T +AV L + +A DI E +++Y+ SL+Q DGSF
Sbjct: 135 SPE-GGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSFLM 193
Query: 510 DKWGEIDTRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIY 689
GE+D R ++CA SL + T E++ C N++GG G PG E+H G +
Sbjct: 194 HVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTF 253
Query: 690 CCVGTLSICKRMDALHADELAWWLCERQLP-SGGLNGRPEKLPXLCYS 830
C + L I KR +L+ L W+ RQ+ GG GR KL CYS
Sbjct: 254 CGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYS 301
>BC020232-1|AAH20232.1| 437|Homo sapiens farnesyltransferase, CAAX
box, beta protein.
Length = 437
Score = 128 bits (310), Expect = 2e-29
Identities = 78/228 (34%), Positives = 114/228 (50%), Gaps = 5/228 (2%)
Frame = +3
Query: 162 QKHSDYLASYGLNKDDYXYCMTEYLRMSGIYWSLTAMELMGQS-SRMPKEDIIEFITQCQ 338
+KH YL GL + Y + R YW L ++EL+ + ++ D+ +F+ CQ
Sbjct: 76 EKHFHYLKR-GLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVCQFLELCQ 134
Query: 339 DSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDI---EGIVRYIVSLQQEDGSFYG 509
E GG G PH+ T +AV L + +A DI E +++Y+ SL+Q DGSF
Sbjct: 135 SPE-GGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSFLM 193
Query: 510 DKWGEIDTRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIY 689
GE+D R ++CA SL + T E++ C N++GG G PG E+H G +
Sbjct: 194 HVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTF 253
Query: 690 CCVGTLSICKRMDALHADELAWWLCERQLP-SGGLNGRPEKLPXLCYS 830
C + L I KR +L+ L W+ RQ+ GG GR KL CYS
Sbjct: 254 CGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYS 301
>L25441-1|AAA35888.1| 377|Homo sapiens geranylgeranyltransferase
type I beta-subunit protein.
Length = 377
Score = 75.4 bits (177), Expect = 3e-13
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Frame = +3
Query: 384 HILYTLSAVQVLAMY-DRLDAVDIEGIVRYIVSLQQEDGSFYGDKWG-EIDTRFSFCAVM 557
HI T + + L + D L V+ E + + +LQ EDGSF G E D RF +CA
Sbjct: 121 HIAMTYTGLSCLVILGDDLSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASC 180
Query: 558 CLSLLQRLDAIDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALH 737
+L +D+ K + ++ M++D G G ESH G +C + +L + +++ +
Sbjct: 181 ICYMLNNWSGMDMKKAITYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVF 240
Query: 738 ADE----LAWWLCERQLPSGGLNGRPEKLPXLCYS 830
+++ + W RQ G +GRP K CYS
Sbjct: 241 SEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYS 273
Score = 37.9 bits (84), Expect = 0.048
Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 5/163 (3%)
Frame = +3
Query: 240 MSGIYWSLTAMELMGQSSRMPKEDIIEFITQCQDSESGGISASIGHDPHILYTLSAVQVL 419
M +Y + ++ S M + I +I + S G++ G + H T + L
Sbjct: 172 MRFVYCASCICYMLNNWSGMDMKKAITYIRRSM-SYDNGLAQGAGLESHGGSTFCGIASL 230
Query: 420 AMYDRLDAV----DIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDA 587
+ +L+ V ++ I R+ + ++Q++G ++G +DT +SF L LL+
Sbjct: 231 CLMGKLEEVFSEKELNRIKRWCI-MRQQNG-YHGRPNKPVDTCYSFWVGATLKLLKIFQY 288
Query: 588 IDINKTVEFVLSCMN-FDGGFGSKPGSESHAGLIYCCVGTLSI 713
+ K ++LS + GGF P S A Y + LS+
Sbjct: 289 TNFEKNRNYILSTQDRLVGGFAKWPDSHPDALHAYFGICGLSL 331
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,217,870
Number of Sequences: 237096
Number of extensions: 2662009
Number of successful extensions: 5974
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5922
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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