Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_K01
         (906 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AF016445-4|AAC69058.1|  312|Caenorhabditis elegans Hypothetical ...    29   4.6  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    29   6.0  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    29   6.0  
AC024793-1|AAF60692.2|  649|Caenorhabditis elegans Atm (ataxia t...    29   6.0  
U39851-5|AAZ32802.1|  408|Caenorhabditis elegans Hypothetical pr...    28   8.0  
U39851-4|AAZ32803.1|  572|Caenorhabditis elegans Hypothetical pr...    28   8.0  
U39851-3|AAZ32804.1|  563|Caenorhabditis elegans Hypothetical pr...    28   8.0  
AF125463-6|AAD12865.1|  301|Caenorhabditis elegans Hypothetical ...    28   8.0  

>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical protein
            ZK270.2e protein.
          Length = 4541

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 222  QHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCED-DDVAIRKQ 398
            QH ++Y  ++A ++ +  E  +A+  +   F SFP +    I  +  LC++ D+V I + 
Sbjct: 4013 QHARKY-RLIARIRHAGDEDEVAAHKLHPVFYSFPAVQYSGILEKTALCKEVDEVPIGRF 4071

Query: 399  A 401
            A
Sbjct: 4072 A 4072


>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical protein
            ZK270.2d protein.
          Length = 4648

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 222  QHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCED-DDVAIRKQ 398
            QH ++Y  ++A ++ +  E  +A+  +   F SFP +    I  +  LC++ D+V I + 
Sbjct: 4002 QHARKY-RLIARIRHAGDEDEVAAHKLHPVFYSFPAVQYSGILEKTALCKEVDEVPIGRF 4060

Query: 399  A 401
            A
Sbjct: 4061 A 4061


>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical protein
            ZK270.2a protein.
          Length = 4530

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 222  QHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCED-DDVAIRKQ 398
            QH ++Y  ++A ++ +  E  +A+  +   F SFP +    I  +  LC++ D+V I + 
Sbjct: 4002 QHARKY-RLIARIRHAGDEDEVAAHKLHPVFYSFPAVQYSGILEKTALCKEVDEVPIGRF 4060

Query: 399  A 401
            A
Sbjct: 4061 A 4061


>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical protein
            ZK270.2e protein.
          Length = 4541

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 222  QHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCED-DDVAIRKQ 398
            QH ++Y  ++A ++ +  E  +A+  +   F SFP +    I  +  LC++ D+V I + 
Sbjct: 4013 QHARKY-RLIARIRHAGDEDEVAAHKLHPVFYSFPAVQYSGILEKTALCKEVDEVPIGRF 4071

Query: 399  A 401
            A
Sbjct: 4072 A 4072


>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical protein
            ZK270.2d protein.
          Length = 4648

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 222  QHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCED-DDVAIRKQ 398
            QH ++Y  ++A ++ +  E  +A+  +   F SFP +    I  +  LC++ D+V I + 
Sbjct: 4002 QHARKY-RLIARIRHAGDEDEVAAHKLHPVFYSFPAVQYSGILEKTALCKEVDEVPIGRF 4060

Query: 399  A 401
            A
Sbjct: 4061 A 4061


>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical protein
            ZK270.2a protein.
          Length = 4530

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 222  QHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCED-DDVAIRKQ 398
            QH ++Y  ++A ++ +  E  +A+  +   F SFP +    I  +  LC++ D+V I + 
Sbjct: 4002 QHARKY-RLIARIRHAGDEDEVAAHKLHPVFYSFPAVQYSGILEKTALCKEVDEVPIGRF 4060

Query: 399  A 401
            A
Sbjct: 4061 A 4061


>AF016445-4|AAC69058.1|  312|Caenorhabditis elegans Hypothetical
           protein T05B4.8 protein.
          Length = 312

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = -3

Query: 577 CEKIPDKAPLGSLFKIVTREFVTTFISVESSDCNSWANISAIL*VCSL 434
           C + P     GS+   VT    T++I+  SS+C SWA  +    V SL
Sbjct: 13  CGRCPSTTTSGSV--TVTSGTCTSYIADSSSNCASWARTTRFCVVLSL 58


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
             protein.
          Length = 18519

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
 Frame = +3

Query: 246   ILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCEDDDVAIRKQAIKDLPVLC 425
             I +      + +R  + F +KF +    L    +E + +L  +DD    K   KD  +  
Sbjct: 13858 ISSKTSSEGRRRRRRTGFASKFASDTLALRGDNVEIEAELLAEDDTVTWKVNGKDADLNS 13917

Query: 426   KEHK-EHTQRIADILAQLLQSEDSTEINVV--TNSLVTILK 539
             + H+  HT     I+ ++  ++   EI     T S  TILK
Sbjct: 13918 RCHEMSHTFFRTLIIDEVEPTDSGMEITATCGTESHTTILK 13958


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
             protein.
          Length = 18534

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
 Frame = +3

Query: 246   ILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCEDDDVAIRKQAIKDLPVLC 425
             I +      + +R  + F +KF +    L    +E + +L  +DD    K   KD  +  
Sbjct: 13858 ISSKTSSEGRRRRRRTGFASKFASDTLALRGDNVEIEAELLAEDDTVTWKVNGKDADLNS 13917

Query: 426   KEHK-EHTQRIADILAQLLQSEDSTEINVV--TNSLVTILK 539
             + H+  HT     I+ ++  ++   EI     T S  TILK
Sbjct: 13918 RCHEMSHTFFRTLIIDEVEPTDSGMEITATCGTESHTTILK 13958


>AC024793-1|AAF60692.2|  649|Caenorhabditis elegans Atm (ataxia
           telangectasia mutated)family protein 1 protein.
          Length = 649

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
 Frame = +3

Query: 273 KEKRLASQFIAKFFNSFPTLSEQAIEAQFD--LC----EDDDVAIRKQAIKDLPVLCKEH 434
           KE +     + K  NS  + + +A+ + FD  LC    EDDD AIR  ++   P++   +
Sbjct: 76  KEHQFEKNDLEKVDNSLNSAARKAVSSGFDALLCISQLEDDDEAIRASSLIIFPLIDVIY 135

Query: 435 KEHT 446
           K  T
Sbjct: 136 KYET 139


>U39851-5|AAZ32802.1|  408|Caenorhabditis elegans Hypothetical
           protein C23G10.7a protein.
          Length = 408

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 12/54 (22%), Positives = 29/54 (53%)
 Frame = +3

Query: 462 ILAQLLQSEDSTEINVVTNSLVTILKSDPKGALSGIFSQIHQNTDGELANEIVR 623
           I+ Q+ + E+  +     + ++++ K  P    + I + +  +TD +L NE++R
Sbjct: 10  IVEQIAEYEEVIDPKAFFDKIISLWKEYPNAISNRITTSVSVDTDSDLWNEVLR 63


>U39851-4|AAZ32803.1|  572|Caenorhabditis elegans Hypothetical
           protein C23G10.7b protein.
          Length = 572

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 12/54 (22%), Positives = 29/54 (53%)
 Frame = +3

Query: 462 ILAQLLQSEDSTEINVVTNSLVTILKSDPKGALSGIFSQIHQNTDGELANEIVR 623
           I+ Q+ + E+  +     + ++++ K  P    + I + +  +TD +L NE++R
Sbjct: 10  IVEQIAEYEEVIDPKAFFDKIISLWKEYPNAISNRITTSVSVDTDSDLWNEVLR 63


>U39851-3|AAZ32804.1|  563|Caenorhabditis elegans Hypothetical
           protein C23G10.7c protein.
          Length = 563

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 12/54 (22%), Positives = 29/54 (53%)
 Frame = +3

Query: 462 ILAQLLQSEDSTEINVVTNSLVTILKSDPKGALSGIFSQIHQNTDGELANEIVR 623
           I+ Q+ + E+  +     + ++++ K  P    + I + +  +TD +L NE++R
Sbjct: 10  IVEQIAEYEEVIDPKAFFDKIISLWKEYPNAISNRITTSVSVDTDSDLWNEVLR 63


>AF125463-6|AAD12865.1|  301|Caenorhabditis elegans Hypothetical
           protein Y49F6C.3 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +3

Query: 495 TEINVVT-NSLVTILKSDPKGALSGIFSQIHQNTDGELANEIVRERCIKFLSSKIQQLGR 671
           T+IN      L+ +L  +P      +   +H     ++A  +V E+C++FLS K ++LGR
Sbjct: 189 TDINAADFQCLLEVLYGEPAIEDENVEGILHLAHMYKMA--VVIEKCVEFLSDKSEKLGR 246


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,202,995
Number of Sequences: 27780
Number of extensions: 304155
Number of successful extensions: 639
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)