Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_J22
(969 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 146 3e-36
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 117 2e-27
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 83 4e-17
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 77 5e-15
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 70 4e-13
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 64 2e-11
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 62 9e-11
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 61 2e-10
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 58 2e-09
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 57 3e-09
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 49 9e-07
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 47 5e-06
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 47 5e-06
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 46 6e-06
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 46 6e-06
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 46 1e-05
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 43 7e-05
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 43 7e-05
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 38 0.003
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 33 0.046
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 30 0.43
SPBC27.02c |ask1|mug181|DASH complex subunit Ask1|Schizosaccharo... 29 0.75
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 29 0.98
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 28 1.7
SPBC1198.06c |||mannan endo-1,6-alpha-mannosidase |Schizosacchar... 28 2.3
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 27 3.0
SPCC777.06c |||hydrolase |Schizosaccharomyces pombe|chr 3|||Manual 27 5.3
SPAC5D6.08c |mes1||meiosis II protein Mes1|Schizosaccharomyces p... 26 9.2
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 146 bits (355), Expect = 3e-36
Identities = 73/134 (54%), Positives = 98/134 (73%)
Frame = +1
Query: 187 MDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQ 366
++ ++T++D+V++TFDDMNLK ELLRGIYAYGFE+PSAIQQRAIMP + RDV+AQAQ
Sbjct: 5 LEDSVIETNYDEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQ 64
Query: 367 SGTGKTATFSISILQQIDTSXRECQALILASHKRAGPTNSERGDSSWVITXIAKXHACIG 546
SGTGKTATFSIS+LQ+IDTS ++CQALILA + + + + + + HACIG
Sbjct: 65 SGTGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNV-ECHACIG 123
Query: 547 WAPMSXERYSPQPG 588
+ + + Q G
Sbjct: 124 GTLVRDDMAALQAG 137
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 117 bits (282), Expect = 2e-27
Identities = 60/91 (65%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
Frame = +1
Query: 187 MDPGTLDTDWD-QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 363
M+ L T D V +F++MNLKE+LLRGIYAYG+E PSA+Q RAI+ +GRDVIAQA
Sbjct: 6 MENVELTTSEDVNAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQA 65
Query: 364 QSGTGKTATFSISILQQIDTSXRECQALILA 456
QSGTGKTATFSI ILQ ID S R+ QALIL+
Sbjct: 66 QSGTGKTATFSIGILQSIDLSVRDTQALILS 96
Score = 33.1 bits (72), Expect = 0.060
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +2
Query: 458 PTRELAQQIQNVVIALG 508
PTRELA QIQNVV+ALG
Sbjct: 97 PTRELAVQIQNVVLALG 113
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 83.4 bits (197), Expect = 4e-17
Identities = 44/109 (40%), Positives = 65/109 (59%), Gaps = 4/109 (3%)
Frame = +1
Query: 139 KNGPSKDQGSYDGPPGMDPGTLDTDWDQVVET----FDDMNLKEELLRGIYAYGFEKPSA 306
+N D+ S+ G P + + V +T F+D LK ELL GI+ GFE+PS
Sbjct: 10 ENANLNDRESFKGQMKAQPVDMRPKTEDVTKTRGTEFEDYYLKRELLMGIFEAGFERPSP 69
Query: 307 IQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSXRECQALIL 453
IQ+ +I + GRD++A+A++GTGKTA F I L+++DT + Q LIL
Sbjct: 70 IQEESIPIALSGRDILARAKNGTGKTAAFVIPSLEKVDTKKSKIQTLIL 118
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 76.6 bits (180), Expect = 5e-15
Identities = 36/79 (45%), Positives = 59/79 (74%), Gaps = 2/79 (2%)
Frame = +1
Query: 226 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 399
V++F+++ LK ELL+GIY+ F+KPS IQ++A+ + R++I Q+QSGTGKTA F++
Sbjct: 113 VKSFEELELKPELLKGIYSMKFQKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFAL 172
Query: 400 SILQQIDTSXRECQALILA 456
++L ++D S + QA+ LA
Sbjct: 173 TMLSRVDASVPKPQAICLA 191
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 70.1 bits (164), Expect = 4e-13
Identities = 40/78 (51%), Positives = 46/78 (58%)
Frame = +1
Query: 235 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 414
F D LK ELLR I GFE PS +QQ I I G DV+ QA+SG GKTA F +S LQQ
Sbjct: 53 FRDFLLKPELLRAITDSGFEHPSEVQQVCIPQSILGTDVLCQAKSGMGKTAVFVLSTLQQ 112
Query: 415 IDTSXRECQALILASHKR 468
I+ E L+L H R
Sbjct: 113 IEPVDGEVSVLVLC-HTR 129
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 64.5 bits (150), Expect = 2e-11
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Frame = +1
Query: 229 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 408
+TF D NL L R I+ FEKP+++Q I ++G+D++AQA++G+GKTA + I IL
Sbjct: 14 KTFSDFNLDPRLQRAIHKCEFEKPTSVQSETIPLALEGKDLVAQARTGSGKTAAYLIPIL 73
Query: 409 Q------QIDTSXRECQALIL 453
+ QID + R AL+L
Sbjct: 74 ELLLKQKQIDENQRGIFALLL 94
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 62.5 bits (145), Expect = 9e-11
Identities = 38/134 (28%), Positives = 68/134 (50%)
Frame = +1
Query: 91 MSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLR 270
M+ S ++ +ED S N + S + D+ ++ +TF ++ + +EL
Sbjct: 1 MAPSEKKLTEDKKNSSLNKKIETSNS-SSEKSSENNNGDSQNNEAPKTFKELGVIDELCE 59
Query: 271 GIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSXRECQALI 450
GF+ P+ IQQ AI + RDVI AQ+G+GKTA F++ ++Q++ + A++
Sbjct: 60 ACEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVIQELWNNPSPFFAVV 119
Query: 451 LASHKRAGPTNSER 492
LA + SE+
Sbjct: 120 LAPTRELAYQISEQ 133
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 61.3 bits (142), Expect = 2e-10
Identities = 29/79 (36%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Frame = +1
Query: 235 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 414
F M L + LLR I+ GF+ P+ IQ++ I ++GRDV+ A++G+GKTA F I +++
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 415 IDT--SXRECQALILASHK 465
+ + + +ALIL+ ++
Sbjct: 131 LKSTLANSNTRALILSPNR 149
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 57.6 bits (133), Expect = 2e-09
Identities = 25/64 (39%), Positives = 40/64 (62%)
Frame = +1
Query: 226 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 405
+E F D+ L E + + I GFE + IQ+R+I P + GRDV+ A++G+GKT F I
Sbjct: 88 IEKFSDLQLSENIQKAIKEMGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFLIPT 147
Query: 406 LQQI 417
++ +
Sbjct: 148 IEML 151
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 57.2 bits (132), Expect = 3e-09
Identities = 24/62 (38%), Positives = 40/62 (64%)
Frame = +1
Query: 232 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 411
+F MNL +L+G+ GFE P+ IQ + I + G+D++ A +G+GKTA F + IL+
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE 319
Query: 412 QI 417
++
Sbjct: 320 RL 321
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 49.2 bits (112), Expect = 9e-07
Identities = 24/69 (34%), Positives = 40/69 (57%)
Frame = +1
Query: 211 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 390
D + V ++ L + + I + G+EKP++IQ +AI GRDVI A++G+GKT
Sbjct: 412 DCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIA 471
Query: 391 FSISILQQI 417
F + + + I
Sbjct: 472 FLLPMFRHI 480
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 46.8 bits (106), Expect = 5e-06
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +1
Query: 226 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 405
V + +L E+L + GF KP IQ I G D+I +A +G+GKT F I I
Sbjct: 121 VSAWAHFSLSPEMLGSLSKAGFSKPMPIQSLVIPEASIGFDIIGKADTGSGKTLAFGIPI 180
Query: 406 LQQI--DTSXRECQALILA 456
L+ + + QAL++A
Sbjct: 181 LEHCLRNVDAKYVQALVVA 199
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 46.8 bits (106), Expect = 5e-06
Identities = 21/66 (31%), Positives = 41/66 (62%)
Frame = +1
Query: 211 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 390
D + +++ L E+L+ + +++PS+IQ+ AI +Q +D+I A++G+GKTA
Sbjct: 243 DLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAETGSGKTAA 302
Query: 391 FSISIL 408
F I ++
Sbjct: 303 FIIPLI 308
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 46.4 bits (105), Expect = 6e-06
Identities = 23/75 (30%), Positives = 43/75 (57%)
Frame = +1
Query: 229 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 408
++F D+ + L+ + A +P+ IQ+ I ++GR+ I A++G+GKTA F++ I+
Sbjct: 7 KSFSDLGISPWLIDTLKALAIYEPTDIQEGVIAQILEGRNCIGGAKTGSGKTAAFALPII 66
Query: 409 QQIDTSXRECQALIL 453
++ ALIL
Sbjct: 67 EKWSKDPSGIFALIL 81
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 46.4 bits (105), Expect = 6e-06
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +1
Query: 226 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 405
V F L LL+ I G+ +P+ +Q+ +I GRD++A AQ+G+GKTA F I
Sbjct: 168 VNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTGSGKTAGFLFPI 227
Query: 406 L 408
L
Sbjct: 228 L 228
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 45.6 bits (103), Expect = 1e-05
Identities = 20/65 (30%), Positives = 38/65 (58%)
Frame = +1
Query: 226 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 405
V TF++ +L+ + GFE P+ IQQ+A + GRD++ + +G+GKT ++ +
Sbjct: 121 VTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPA 180
Query: 406 LQQID 420
+ I+
Sbjct: 181 IVHIN 185
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 42.7 bits (96), Expect = 7e-05
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +1
Query: 232 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 411
+F +N+ + L + A GF+K + +Q AI ++ +D++ +A +G+GKT + +
Sbjct: 2 SFQSINIDKWLKNAVAAQGFKKMTPVQANAIPLFLKNKDLVVEAVTGSGKTLAYLLPCFD 61
Query: 412 QI---DTSXRECQALILA 456
++ DT ALI+A
Sbjct: 62 KVTRRDTDETGLGALIVA 79
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 42.7 bits (96), Expect = 7e-05
Identities = 21/62 (33%), Positives = 37/62 (59%)
Frame = +1
Query: 235 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 414
FD++++ +L G+ Y ++P+ IQ + GRDV+ A++G+GKT F I LQ
Sbjct: 169 FDELDVSAKLREGLKNY--KEPTPIQAATWPYLLAGRDVVGIAETGSGKTVAFGIPALQY 226
Query: 415 ID 420
++
Sbjct: 227 LN 228
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 37.5 bits (83), Expect = 0.003
Identities = 16/66 (24%), Positives = 37/66 (56%)
Frame = +1
Query: 220 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 399
+ V+ F ++ L + + F + IQ++ I ++GRD++ A++G+GKT F +
Sbjct: 36 ETVDHFAELPLTQPTKSALKNAHFITLTEIQKQCIPSALKGRDILGAAKTGSGKTLAFIV 95
Query: 400 SILQQI 417
+++ +
Sbjct: 96 PLIENL 101
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 33.5 bits (73), Expect = 0.046
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 286 GFEKPSAIQQRAIMPCIQGRD-VIAQAQSGTGKTATFSISILQQI 417
GFEK + +QQR + + + QA++GTGKT F + + +
Sbjct: 57 GFEKMTPVQQRVLNEVFPNEENAVVQAKTGTGKTLAFLLVAFKDV 101
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 30.3 bits (65), Expect = 0.43
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +1
Query: 256 EELLRGIYAYGFEKPSAIQ----QRAIMPCIQG-RDVIAQAQSGTGKTATFSISILQQI 417
EE GI +K + + QR +P I RD++A A +G+GKT + ILQ++
Sbjct: 50 EEFPEGILCENLKKQNITECTTIQRYAIPTIGSKRDLLACAPTGSGKTIAYLFPILQKL 108
>SPBC27.02c |ask1|mug181|DASH complex subunit
Ask1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 307
Score = 29.5 bits (63), Expect = 0.75
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 202 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRD 348
LDT+W V + NL+ + + I + F PS I + MP + R+
Sbjct: 184 LDTNWQVQVTPREPKNLQSQEVMDIDSSPFVSPSPISMKMDMPSLNDRN 232
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 29.1 bits (62), Expect = 0.98
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 250 LKEELLRGIY-AYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI 417
L +EL+ +Y + EK Q AI G VI + +GK+ + I ILQ +
Sbjct: 295 LSQELINALYTSRNIEKTYKHQADAINHLWNGFHVIVSTSTSSGKSLIYQIPILQSL 351
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 298 PSAIQQRAIMPCIQ--GRDVIAQAQSGTGKTATFSISILQQI 417
P+AIQ + + +D +AQ+G+GKT + + I+Q++
Sbjct: 162 PTAIQSCCLPALLNTDDKDAFIEAQTGSGKTLAYLLPIVQRL 203
>SPBC1198.06c |||mannan endo-1,6-alpha-mannosidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 466
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 199 TLDTDWDQVVETFDDMNLKEELLRGIYAYGF 291
T D WD E FDD N + +GI+ F
Sbjct: 281 TDDIAWDPQCEYFDDCNSDQTAFKGIFMQSF 311
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 27.5 bits (58), Expect = 3.0
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +1
Query: 331 CIQGRDV--IAQAQSGTGKTATFSISILQQIDTSXRECQALILASHK 465
C G D+ I +S GKT TF S LQ DT+ R + + HK
Sbjct: 113 CRNGIDINLIVVGESSLGKT-TFVNSFLQSNDTNFRPKKTMDFVEHK 158
>SPCC777.06c |||hydrolase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 301
Score = 26.6 bits (56), Expect = 5.3
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2
Query: 176 DLREWTLGHLTPT 214
DLREWTLG L P+
Sbjct: 110 DLREWTLGFLQPS 122
>SPAC5D6.08c |mes1||meiosis II protein Mes1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 101
Score = 25.8 bits (54), Expect = 9.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 196 QGPFPEVHRNYLDPSMAHFWNPLANL 119
Q P P VH ++ PS A NPL ++
Sbjct: 75 QNPPPSVHSSHKQPSKARSPNPLLSM 100
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,029,282
Number of Sequences: 5004
Number of extensions: 57704
Number of successful extensions: 168
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 497299314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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