Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_J22
(969 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 133 2e-31
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 133 2e-31
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 122 5e-28
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 122 5e-28
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 88 1e-17
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 68 1e-11
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 64 1e-10
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 64 1e-10
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 57 2e-08
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 57 2e-08
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 57 2e-08
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 56 4e-08
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 54 2e-07
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 54 2e-07
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 54 2e-07
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 52 5e-07
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 51 1e-06
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 50 2e-06
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 50 2e-06
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 50 2e-06
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 50 2e-06
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 50 2e-06
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 50 3e-06
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 50 3e-06
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 50 3e-06
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 49 6e-06
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 49 6e-06
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 49 6e-06
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 48 1e-05
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 48 1e-05
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 46 3e-05
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 45 9e-05
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 44 2e-04
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 44 2e-04
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 42 5e-04
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 42 5e-04
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 42 9e-04
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 41 0.002
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 39 0.006
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 38 0.011
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 38 0.011
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 38 0.011
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 36 0.057
AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical ... 31 0.93
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 31 1.2
U80027-5|AAC48123.1| 122|Caenorhabditis elegans Hypothetical pr... 29 3.8
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 29 5.0
AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical ... 29 6.6
U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcript... 28 8.7
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 133 bits (322), Expect = 2e-31
Identities = 62/87 (71%), Positives = 75/87 (86%)
Frame = +1
Query: 196 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 375
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G+DVIAQAQSGT
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGT 77
Query: 376 GKTATFSISILQQIDTSXRECQALILA 456
GKTATFS+SILQ+ID QAL++A
Sbjct: 78 GKTATFSVSILQRIDHEDPHVQALVMA 104
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2
Query: 458 PTRELAQQIQNVVIALG 508
PTRELAQQIQ V+ ALG
Sbjct: 105 PTRELAQQIQKVMSALG 121
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 133 bits (322), Expect = 2e-31
Identities = 62/87 (71%), Positives = 75/87 (86%)
Frame = +1
Query: 196 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 375
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G+DVIAQAQSGT
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGT 77
Query: 376 GKTATFSISILQQIDTSXRECQALILA 456
GKTATFS+SILQ+ID QAL++A
Sbjct: 78 GKTATFSVSILQRIDHEDPHVQALVMA 104
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2
Query: 458 PTRELAQQIQNVVIALG 508
PTRELAQQIQ V+ ALG
Sbjct: 105 PTRELAQQIQKVMSALG 121
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 122 bits (293), Expect = 5e-28
Identities = 58/78 (74%), Positives = 67/78 (85%)
Frame = +1
Query: 223 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 402
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+ ++ RDVIAQAQSGTGKTATFSIS
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSIS 83
Query: 403 ILQQIDTSXRECQALILA 456
+LQ +DT RE QALIL+
Sbjct: 84 VLQSLDTQVRETQALILS 101
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2
Query: 458 PTRELAQQIQNVVIALG 508
PTRELA QIQ VV+ALG
Sbjct: 102 PTRELAVQIQKVVLALG 118
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 122 bits (293), Expect = 5e-28
Identities = 58/78 (74%), Positives = 67/78 (85%)
Frame = +1
Query: 223 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 402
++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI ++ RDVIAQAQSGTGKTATFSIS
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSIS 83
Query: 403 ILQQIDTSXRECQALILA 456
+LQ +DT RE QALIL+
Sbjct: 84 VLQSLDTQVRETQALILS 101
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2
Query: 458 PTRELAQQIQNVVIALG 508
PTRELA QIQ VV+ALG
Sbjct: 102 PTRELAVQIQKVVLALG 118
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 87.8 bits (208), Expect = 1e-17
Identities = 41/74 (55%), Positives = 51/74 (68%)
Frame = +1
Query: 244 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDT 423
M LKEELLRGIY +GFEKPSAIQ+ A+ PC G+DV Q+Q+G+GKT I ILQ ID
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDC 60
Query: 424 SXRECQALILASHK 465
Q ++LA +
Sbjct: 61 EDAHLQVILLAPQR 74
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 67.7 bits (158), Expect = 1e-11
Identities = 28/73 (38%), Positives = 51/73 (69%)
Frame = +1
Query: 235 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 414
F+D L +LL GI+ G+EKPS IQ+ +I + G+D++A+A++GTGKT + I ++++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 415 IDTSXRECQALIL 453
I + + QA+++
Sbjct: 105 IQPALKAIQAMVI 117
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 64.1 bits (149), Expect = 1e-10
Identities = 35/78 (44%), Positives = 45/78 (57%)
Frame = +1
Query: 235 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 414
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 415 IDTSXRECQALILASHKR 468
++ E +++ H R
Sbjct: 103 LEPVDGEV-SVVCMCHTR 119
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 64.1 bits (149), Expect = 1e-10
Identities = 35/78 (44%), Positives = 45/78 (57%)
Frame = +1
Query: 235 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 414
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 415 IDTSXRECQALILASHKR 468
++ E +++ H R
Sbjct: 103 LEPVDGEV-SVVCMCHTR 119
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 64.1 bits (149), Expect = 1e-10
Identities = 35/78 (44%), Positives = 45/78 (57%)
Frame = +1
Query: 235 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 414
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 42 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 101
Query: 415 IDTSXRECQALILASHKR 468
++ E +++ H R
Sbjct: 102 LEPVDGEV-SVVCMCHTR 118
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 57.2 bits (132), Expect = 2e-08
Identities = 26/74 (35%), Positives = 46/74 (62%)
Frame = +1
Query: 232 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 411
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+SGTGKT FS+ ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 412 QIDTSXRECQALIL 453
+D+ Q +I+
Sbjct: 83 NLDSRSSHIQKVIV 96
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 57.2 bits (132), Expect = 2e-08
Identities = 26/74 (35%), Positives = 46/74 (62%)
Frame = +1
Query: 232 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 411
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+SGTGKT FS+ ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 412 QIDTSXRECQALIL 453
+D+ Q +I+
Sbjct: 83 NLDSRSSHIQKVIV 96
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 57.2 bits (132), Expect = 2e-08
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Frame = +1
Query: 130 EDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 303
E K+G SK Q + D + G +LDT V +F+ MNL ++L+ G+ P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172
Query: 304 AIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI 417
IQQ I + G+D+ A A +GTGKTA F + IL+++
Sbjct: 173 PIQQACIPVALTGKDICACAATGTGKTAAFVLPILERM 210
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 56.0 bits (129), Expect = 4e-08
Identities = 26/71 (36%), Positives = 43/71 (60%)
Frame = +1
Query: 205 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 384
D + D ++F ++ + + L G+ KPS IQQ A+ +QG+DVI A++G+GKT
Sbjct: 36 DDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKT 95
Query: 385 ATFSISILQQI 417
F+I +LQ +
Sbjct: 96 GAFAIPVLQSL 106
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 53.6 bits (123), Expect = 2e-07
Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Frame = +1
Query: 226 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 399
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 400 SILQQIDTSXRECQALILA 456
++L +ID + Q + LA
Sbjct: 268 TMLCRIDVNLMCPQCICLA 286
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 53.6 bits (123), Expect = 2e-07
Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Frame = +1
Query: 226 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 399
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 400 SILQQIDTSXRECQALILA 456
++L +ID + Q + LA
Sbjct: 293 TMLCRIDVNLMCPQCICLA 311
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 53.6 bits (123), Expect = 2e-07
Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Frame = +1
Query: 226 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 399
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 400 SILQQIDTSXRECQALILA 456
++L +ID + Q + LA
Sbjct: 677 TMLCRIDVNLMCPQCICLA 695
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 52.4 bits (120), Expect = 5e-07
Identities = 22/75 (29%), Positives = 46/75 (61%)
Frame = +1
Query: 193 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSG 372
P + D++ +TF D L E +L+ I G+EK + +Q+ I ++ ++++ +A++G
Sbjct: 77 PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTG 136
Query: 373 TGKTATFSISILQQI 417
+GKT F I ++Q++
Sbjct: 137 SGKTGAFLIPLVQKL 151
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Frame = +1
Query: 211 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTA 387
D Q + F D++L E + I G+++P+ +Q+ +I P +QG RD+++ AQ+G+GKTA
Sbjct: 160 DVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSI-PALQGGRDLMSCAQTGSGKTA 218
Query: 388 TFSISILQQI 417
F + ++ I
Sbjct: 219 AFLVPLVNAI 228
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/63 (38%), Positives = 40/63 (63%)
Frame = +1
Query: 229 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 408
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 409 QQI 417
++
Sbjct: 401 TRL 403
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/63 (38%), Positives = 40/63 (63%)
Frame = +1
Query: 229 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 408
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 409 QQI 417
++
Sbjct: 401 TRL 403
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/63 (38%), Positives = 40/63 (63%)
Frame = +1
Query: 229 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 408
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 409 QQI 417
++
Sbjct: 401 TRL 403
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +1
Query: 235 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISILQ 411
+ + L + + I GF +P+ IQ++ I PCI G+DV+A +++G+GKTA F I +LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
Query: 412 QI 417
++
Sbjct: 85 KL 86
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +1
Query: 235 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISILQ 411
+ + L + + I GF +P+ IQ++ I PCI G+DV+A +++G+GKTA F I +LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
Query: 412 QI 417
++
Sbjct: 85 KL 86
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 49.6 bits (113), Expect = 3e-06
Identities = 23/63 (36%), Positives = 39/63 (61%)
Frame = +1
Query: 229 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 408
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 409 QQI 417
++
Sbjct: 612 ARL 614
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 49.6 bits (113), Expect = 3e-06
Identities = 23/63 (36%), Positives = 39/63 (61%)
Frame = +1
Query: 229 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 408
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 409 QQI 417
++
Sbjct: 612 ARL 614
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 49.6 bits (113), Expect = 3e-06
Identities = 23/63 (36%), Positives = 39/63 (61%)
Frame = +1
Query: 229 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 408
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 409 QQI 417
++
Sbjct: 612 ARL 614
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 48.8 bits (111), Expect = 6e-06
Identities = 20/64 (31%), Positives = 39/64 (60%)
Frame = +1
Query: 226 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 405
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 138 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 197
Query: 406 LQQI 417
+Q I
Sbjct: 198 IQHI 201
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 48.8 bits (111), Expect = 6e-06
Identities = 20/64 (31%), Positives = 39/64 (60%)
Frame = +1
Query: 226 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 405
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 122 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 181
Query: 406 LQQI 417
+Q I
Sbjct: 182 IQHI 185
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 48.8 bits (111), Expect = 6e-06
Identities = 20/64 (31%), Positives = 39/64 (60%)
Frame = +1
Query: 226 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 405
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 119 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 178
Query: 406 LQQI 417
+Q I
Sbjct: 179 IQHI 182
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 48.0 bits (109), Expect = 1e-05
Identities = 20/66 (30%), Positives = 40/66 (60%)
Frame = +1
Query: 220 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 399
Q ++F D ++ + + R + G+ + + IQQ + G+D++A AQ+G+GKTA F +
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
Query: 400 SILQQI 417
I+ ++
Sbjct: 355 PIMSRL 360
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 48.0 bits (109), Expect = 1e-05
Identities = 20/66 (30%), Positives = 40/66 (60%)
Frame = +1
Query: 220 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 399
Q ++F D ++ + + R + G+ + + IQQ + G+D++A AQ+G+GKTA F +
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
Query: 400 SILQQI 417
I+ ++
Sbjct: 355 PIMSRL 360
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 46.4 bits (105), Expect = 3e-05
Identities = 20/61 (32%), Positives = 39/61 (63%)
Frame = +1
Query: 226 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 405
+ +++ +E+ + + G+ +P+ IQ++AI +Q RDVI A++G+GKTA F + +
Sbjct: 300 LRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPL 359
Query: 406 L 408
L
Sbjct: 360 L 360
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = +1
Query: 262 LLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---SISILQQIDTSXR 432
LL+ + GF + IQ ++I P ++G+DV+A A++G+GKT F +I +L +++
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 433 ECQALILASHKR 468
+I+ S R
Sbjct: 139 NGTGVIIVSPTR 150
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 44.8 bits (101), Expect = 9e-05
Identities = 20/69 (28%), Positives = 41/69 (59%)
Frame = +1
Query: 211 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 390
D + ++T+ + +++ + + + KP++IQ +AI + GRDVI A++G+GKT
Sbjct: 298 DCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLA 357
Query: 391 FSISILQQI 417
F + + + I
Sbjct: 358 FLLPMFRHI 366
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 44.0 bits (99), Expect = 2e-04
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Frame = +1
Query: 106 ERRSEDWPEDSKNGPSKDQ-GSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYA 282
E + D E+ G D+ S D P P + D + + F + + + + +
Sbjct: 50 EDEASDEDEEESEGEEGDEFKSSDDTP--KPIQISED-NMTTKKFSQLGVCSWITQQLQT 106
Query: 283 YGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSXRECQALIL 453
+ + +Q I ++G D++ A++GTGKT F+I ILQ++ ALIL
Sbjct: 107 MQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALIL 163
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 44.0 bits (99), Expect = 2e-04
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Frame = +1
Query: 106 ERRSEDWPEDSKNGPSKDQ-GSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYA 282
E + D E+ G D+ S D P P + D + + F + + + + +
Sbjct: 50 EDEASDEDEEESEGEEGDEFKSSDDTP--KPIQISED-NMTTKKFSQLGVCSWITQQLQT 106
Query: 283 YGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSXRECQALIL 453
+ + +Q I ++G D++ A++GTGKT F+I ILQ++ ALIL
Sbjct: 107 MQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALIL 163
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/65 (29%), Positives = 37/65 (56%)
Frame = +1
Query: 223 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 402
++ F D ++ LL + +PS IQ ++I + R+V+A A +G+GKT F++
Sbjct: 124 IILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALP 183
Query: 403 ILQQI 417
++ +I
Sbjct: 184 VIDEI 188
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 42.3 bits (95), Expect = 5e-04
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 7/121 (5%)
Frame = +1
Query: 100 SSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKE------E 261
SS ++SE+ E + P K+Q G D G + + D K+ E
Sbjct: 107 SSAKKSENATETTTEKP-KEQKKRKGGENGDTGKPKKSKKEASKKTDISAWKQFYFLPNE 165
Query: 262 LLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQQIDTSXREC 438
+L I GF +P+ IQ + ++ R DV+ A++G+GKT F I ++ ++ S +
Sbjct: 166 VLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDS 225
Query: 439 Q 441
Q
Sbjct: 226 Q 226
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +1
Query: 235 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 411
F++ + EL + + + P+A+Q AI + G D + A++G+GKT FS+ I Q
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 42.3 bits (95), Expect = 5e-04
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +1
Query: 235 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 414
F+D L L G+ + KP+ IQ+ I + G DV+ A++G+GKT I +L+
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 415 I 417
+
Sbjct: 138 L 138
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 41.5 bits (93), Expect = 9e-04
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +1
Query: 286 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID 420
GFEKPS IQ + + G+D I +Q+G+GKT F + L ID
Sbjct: 103 GFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHID 147
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +1
Query: 232 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF 393
+F + + L+ I +E+P+ IQ AI + GRDV+ A++G+GKTA +
Sbjct: 266 SFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAY 319
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +1
Query: 226 VETFDDMNLKEELLRGIYAY-GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 402
+ +F +M + LL + G P+AIQ + I + GRD+I A +G+GKT TF +
Sbjct: 188 IGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLP 247
Query: 403 IL 408
++
Sbjct: 248 LV 249
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 37.9 bits (84), Expect = 0.011
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 283 YG-FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI 417
YG F+KP+ IQ + + GRD+I+ A++G+GKT F + L I
Sbjct: 146 YGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHI 191
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 37.9 bits (84), Expect = 0.011
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 232 TFDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 399
+FD L ++L + +P+ IQ+ + P + G DV+A A +G+GKT F I
Sbjct: 736 SFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLI 792
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 37.9 bits (84), Expect = 0.011
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 232 TFDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 399
+FD L ++L + +P+ IQ+ + P + G DV+A A +G+GKT F I
Sbjct: 736 SFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLI 792
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 36.3 bits (80), Expect = 0.033
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 274 IYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQQIDTSXRECQ 441
I+ + F +P+ IQ + ++ R DV+ A++G+GKT F I ++ ++ S + Q
Sbjct: 3 IFFFRFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQ 59
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 35.5 bits (78), Expect = 0.057
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +1
Query: 217 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 396
D + ++ + L +L + + IQ I + G DV+ QA++ GKTA F
Sbjct: 377 DVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFG 436
Query: 397 ISILQQI 417
+ I+ +I
Sbjct: 437 LPIIDKI 443
>AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical
protein Y39A3B.5a protein.
Length = 582
Score = 31.5 bits (68), Expect = 0.93
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 190 PFPEVHRNYLDPSMAHFWNPLANLLTFFQTNKT 92
P P + + D FWN L+N LTF Q +KT
Sbjct: 338 PPPAIVASMTDEQKLSFWNKLSNKLTFSQQDKT 370
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 301 SAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 411
+A+QQ +I +GR ++ +A +G GKT F I ++
Sbjct: 117 NAVQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIE 153
>U80027-5|AAC48123.1| 122|Caenorhabditis elegans Hypothetical
protein T28A11.13 protein.
Length = 122
Score = 29.5 bits (63), Expect = 3.8
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 585 RLGGISFTGHWCPP 544
++GG F+ HWCPP
Sbjct: 16 KIGGFYFSAHWCPP 29
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 307 IQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 411
+QQ +I +GR ++ +A +G GKT F I ++
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIE 53
>AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical
protein Y39A3B.5c protein.
Length = 471
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 160 DPSMAHFWNPLANLLTFFQTNKT 92
D FWN L+N LTF Q +KT
Sbjct: 237 DEQKLSFWNKLSNKLTFSQQDKT 259
>U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcription
factor) homologprotein 1 protein.
Length = 759
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +2
Query: 53 DFXFSSSATAVETCLIRLKEGQKIGQRIPKMGHRRIKVVTMDLREWTLGHLTPTGIKLSK 232
D +S A+AVE + K K+ + K + D+RE T +TP IK+
Sbjct: 494 DTTSTSVASAVEKVIAEKKLSNKVNYEMLKDLETMATGIKRDIRESTPAPVTPISIKVDS 553
Query: 233 PSMT 244
+T
Sbjct: 554 SDVT 557
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,046,454
Number of Sequences: 27780
Number of extensions: 337993
Number of successful extensions: 891
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2510937120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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