Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_J21
(860 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 32 0.60
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 32 0.60
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 31 1.4
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 31 1.4
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 30 2.4
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 30 2.4
U64840-1|AAB04959.2| 484|Caenorhabditis elegans Glutamate-gated... 29 3.2
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 29 3.2
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 29 3.2
AJ243914-1|CAB51708.1| 484|Caenorhabditis elegans Glutamate-gat... 29 3.2
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 29 4.3
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 29 4.3
U97008-18|AAB52317.2| 115|Caenorhabditis elegans Serpin protein... 28 9.8
U80843-9|AAB37969.1| 392|Caenorhabditis elegans Hypothetical pr... 28 9.8
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 174 VISEPTVFDANHPFVFFLTGEGVNLFNGI 260
+++EPT F A+HPF+F + E LF G+
Sbjct: 329 IMAEPTQFVADHPFLFAVLFENHTLFLGV 357
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 174 VISEPTVFDANHPFVFFLTGEGVNLFNGI 260
+++EPT F A+HPF+F + E LF G+
Sbjct: 329 IMAEPTQFVADHPFLFAVLFENHTLFLGV 357
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 183 EPTVFDANHPFVFFLTGEGVNLFNGI 260
+P VF A+HPF+F LT +F GI
Sbjct: 339 KPIVFQADHPFLFMLTQTNHPIFLGI 364
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 183 EPTVFDANHPFVFFLTGEGVNLFNGI 260
+P VF A+HPF+F LT +F GI
Sbjct: 339 KPIVFQADHPFLFMLTQTNHPIFLGI 364
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 183 EPTVFDANHPFVFFLTGEGVNLFNGI 260
EP F A+HPF+F L+ + LF GI
Sbjct: 348 EPIEFTADHPFLFILSKDNHPLFIGI 373
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 183 EPTVFDANHPFVFFLTGEGVNLFNGI 260
EP F A+HPF+F L+ + LF GI
Sbjct: 348 EPIEFTADHPFLFILSKDNHPLFIGI 373
>U64840-1|AAB04959.2| 484|Caenorhabditis elegans Glutamate-gated
chloride channelprotein 3 protein.
Length = 484
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = -1
Query: 200 VEYSWLTYNGTQ*FYVEYVSCSSFSAFLVDFNERFL 93
+E++W+TY ++ FY +CSS ++ L++ + +
Sbjct: 323 LEFAWVTYISSRSFYKRNKNCSSRNSLLIETKQALI 358
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 174 VISEPTVFDANHPFVFFLTGEGVNLFNGI 260
V+ EP F A+HPF F L+ + LF G+
Sbjct: 336 VMEEPKDFTADHPFFFVLSKDNHPLFVGL 364
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 174 VISEPTVFDANHPFVFFLTGEGVNLFNGI 260
V+ EP F A+HPF F L+ + LF G+
Sbjct: 336 VMEEPKDFTADHPFFFVLSKDNHPLFVGL 364
>AJ243914-1|CAB51708.1| 484|Caenorhabditis elegans Glutamate-gated
chloride channelsubunit protein.
Length = 484
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = -1
Query: 200 VEYSWLTYNGTQ*FYVEYVSCSSFSAFLVDFNERFL 93
+E++W+TY ++ FY +CSS ++ L++ + +
Sbjct: 323 LEFAWVTYISSRSFYKRNKNCSSRNSLLIETKQALI 358
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 165 LSAVISEPTVFDANHPFVFFLTGEGVNLFNGIF 263
+SA + +P F A+HPF F +T +F G+F
Sbjct: 328 MSARMEQPVNFIADHPFFFTITFLNHPIFVGVF 360
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 165 LSAVISEPTVFDANHPFVFFLTGEGVNLFNGIF 263
+SA + +P F A+HPF F +T +F G+F
Sbjct: 328 MSARMEQPVNFIADHPFFFTITFLNHPIFVGVF 360
>U97008-18|AAB52317.2| 115|Caenorhabditis elegans Serpin protein 5
protein.
Length = 115
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 183 EPTVFDANHPFVFFLTGEGVNLFNGI 260
+P F A+HPF+F L+ + LF G+
Sbjct: 88 KPIEFTADHPFLFILSKDNHPLFIGV 113
>U80843-9|AAB37969.1| 392|Caenorhabditis elegans Hypothetical
protein C32B5.14 protein.
Length = 392
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 163 H*VPL*VSQLYSTRTIPSYSS*REKVSIYLTEFSFLR 273
H + L SQ YSTR S+ + +K+S Y+ E +F+R
Sbjct: 125 HNLTLQKSQRYSTRIWESHGTILKKLSYYVPENNFIR 161
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,031,337
Number of Sequences: 27780
Number of extensions: 308659
Number of successful extensions: 537
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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