Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_J20
(864 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF022968-6|AAB69884.1| 388|Caenorhabditis elegans Dehydrogenase... 52 4e-07
Z74032-1|CAA98465.3| 342|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z75547-15|CAA99897.2| 251|Caenorhabditis elegans Hypothetical p... 39 0.004
Z75527-10|CAJ80819.1| 251|Caenorhabditis elegans Hypothetical p... 39 0.004
AF003130-6|AAO38639.1| 343|Caenorhabditis elegans Dehydrogenase... 38 0.009
AF003130-5|AAB54122.2| 368|Caenorhabditis elegans Dehydrogenase... 38 0.009
U41749-1|AAB52488.2| 248|Caenorhabditis elegans Dehydrogenases,... 36 0.049
AF003130-7|AAO38638.1| 247|Caenorhabditis elegans Dehydrogenase... 36 0.049
U23455-5|AAC46535.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.20
U43283-7|AAC69018.1| 537|Caenorhabditis elegans Hypothetical pr... 31 0.80
U43283-4|AAU05548.1| 311|Caenorhabditis elegans Dehydrogenases,... 31 1.4
Z74030-5|CAA98438.1| 278|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z68880-9|CAA93099.1| 255|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z68879-12|CAA93091.1| 255|Caenorhabditis elegans Hypothetical p... 30 1.9
Z81035-3|CAB02732.1| 333|Caenorhabditis elegans Hypothetical pr... 30 2.4
U39997-2|AAK68388.1| 378|Caenorhabditis elegans Dehydrogenases,... 30 2.4
Z81457-3|CAB03815.1| 279|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z68299-3|CAA92612.1| 262|Caenorhabditis elegans Hypothetical pr... 29 4.3
U80439-3|AAB37640.1| 323|Caenorhabditis elegans Dehydrogenases,... 29 5.7
AF022981-7|AAG24204.1| 280|Caenorhabditis elegans Hypothetical ... 29 5.7
AC024791-27|AAM43788.1| 254|Caenorhabditis elegans Hypothetical... 29 5.7
U28739-13|AAK68187.1| 418|Caenorhabditis elegans Dehydrogenases... 28 7.5
Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical p... 28 9.9
Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical p... 28 9.9
AL031633-8|CAA21012.1| 296|Caenorhabditis elegans Hypothetical ... 28 9.9
AF022978-10|AAG24180.2| 275|Caenorhabditis elegans Hypothetical... 28 9.9
AC006677-6|AAF39953.1| 279|Caenorhabditis elegans Dehydrogenase... 28 9.9
>AF022968-6|AAB69884.1| 388|Caenorhabditis elegans Dehydrogenases,
short chain protein16 protein.
Length = 388
Score = 52.4 bits (120), Expect = 4e-07
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Frame = +1
Query: 280 KQRKPSKNCVRTHSL*NVTRVESVQEFRKYVLTVLKDNPKYKFHAVVNNAGVMTV-GKYE 456
K +K K + T L +VT SV + +V +LK+ K +VNNAG+ ++ G +
Sbjct: 77 KLKKGPKGQLYTLQL-DVTSQASVDSAKSFVTKILKEQNS-KLWGLVNNAGIFSIHGPDD 134
Query: 457 WMTASMIESPVHVNLLGAMRVISAFXPEIRKTAIETTSKPKPRIINVGSHCG 612
W + S ++VN LGA+R+ AF P I+K+ + RI+ +GS G
Sbjct: 135 WCSVDEYASSLNVNTLGAVRMCHAFVPLIKKS--------RGRIVTMGSTAG 178
>Z74032-1|CAA98465.3| 342|Caenorhabditis elegans Hypothetical
protein F35B12.2 protein.
Length = 342
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3
Query: 168 RLVAVTGCDSGLGWAVAARLAREGFITIAGMHKGIETEAAKALEKLCAH 314
R + +TGCD+G G +A + A+ GF+ AG + TEAAK LE A+
Sbjct: 42 RAILITGCDTGFGRELAKKCAKNGFLVFAGC---LTTEAAKTLESESAN 87
Score = 42.7 bits (96), Expect = 3e-04
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Frame = +1
Query: 328 NVTRVESVQEFRKYVLTVLKDNPKYKFHAVVNNAGVMT-VGKYEWMTASMIESPVHVNLL 504
+V++ ESV+ K V V K +K VVNNAG+ + G +W + + + VN L
Sbjct: 96 DVSKDESVE---KTVEFVKKSLGNHKLWGVVNNAGIFSCYGPDDWCRMNDYKLALDVNCL 152
Query: 505 GAMRVISAFXPEIRKTAIETTSKPKPRIINVGSHCGLQPLPAFAAYSASKAG 660
G +RV AF ++ K RI+ V S G PA Y SK G
Sbjct: 153 GVIRVTQAFKKLVKAA--------KGRIVTVTSVNGRLSTPAAGPYVVSKFG 196
>Z75547-15|CAA99897.2| 251|Caenorhabditis elegans Hypothetical
protein R11D1.11 protein.
Length = 251
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/88 (27%), Positives = 41/88 (46%)
Frame = +1
Query: 394 PKYKFHAVVNNAGVMTVGKYEWMTASMIESPVHVNLLGAMRVISAFXPEIRKTAIETTSK 573
P + H +VNNAG+ T +T I+ VN+ G + + + + ++ +
Sbjct: 80 PHFPIHGLVNNAGIATNHAIGQITQQSIDRTFAVNVRGPILIAQL----VARNFVD--RQ 133
Query: 574 PKPRIINVGSHCGLQPLPAFAAYSASKA 657
K I+N+ S ++PL Y ASKA
Sbjct: 134 IKGSIVNISSQAAIRPLDNHTVYCASKA 161
>Z75527-10|CAJ80819.1| 251|Caenorhabditis elegans Hypothetical
protein R11D1.11 protein.
Length = 251
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/88 (27%), Positives = 41/88 (46%)
Frame = +1
Query: 394 PKYKFHAVVNNAGVMTVGKYEWMTASMIESPVHVNLLGAMRVISAFXPEIRKTAIETTSK 573
P + H +VNNAG+ T +T I+ VN+ G + + + + ++ +
Sbjct: 80 PHFPIHGLVNNAGIATNHAIGQITQQSIDRTFAVNVRGPILIAQL----VARNFVD--RQ 133
Query: 574 PKPRIINVGSHCGLQPLPAFAAYSASKA 657
K I+N+ S ++PL Y ASKA
Sbjct: 134 IKGSIVNISSQAAIRPLDNHTVYCASKA 161
>AF003130-6|AAO38639.1| 343|Caenorhabditis elegans Dehydrogenases,
short chain protein2, isoform c protein.
Length = 343
Score = 37.9 bits (84), Expect = 0.009
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 4/115 (3%)
Frame = +1
Query: 328 NVTRVESVQEFRKYVLTVLKDNPKYK-FHAVVNNAGVMTVGKY---EWMTASMIESPVHV 495
+VT ESV E K + K +Y HAVVNNAG+ GK+ +++ + ++
Sbjct: 104 DVTSDESVGEVAK---RLEKKCEQYGGLHAVVNNAGI--TGKHIADDFLDINEYLKVANI 158
Query: 496 NLLGAMRVISAFXPEIRKTAIETTSKPKPRIINVGSHCGLQPLPAFAAYSASKAG 660
NL G +R A ++K K + R++ V S C LP YS SK G
Sbjct: 159 NLWGPIRTTMA----VKK----LLKKARGRVVTVASICARVGLPGLGPYSVSKYG 205
Score = 35.5 bits (78), Expect = 0.049
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +3
Query: 168 RLVAVTGCDSGLGWAVAARLAREGFITIAG--MHKGIETEAAKALEKL 305
R V +TGCDSG G +A + +G AG +GIE+ +A+A + +
Sbjct: 45 RAVFITGCDSGFGRGLALKCLEQGMPVFAGCLTEQGIESLSAEARKSI 92
>AF003130-5|AAB54122.2| 368|Caenorhabditis elegans Dehydrogenases,
short chain protein2, isoform a protein.
Length = 368
Score = 37.9 bits (84), Expect = 0.009
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 4/115 (3%)
Frame = +1
Query: 328 NVTRVESVQEFRKYVLTVLKDNPKYK-FHAVVNNAGVMTVGKY---EWMTASMIESPVHV 495
+VT ESV E K + K +Y HAVVNNAG+ GK+ +++ + ++
Sbjct: 129 DVTSDESVGEVAK---RLEKKCEQYGGLHAVVNNAGI--TGKHIADDFLDINEYLKVANI 183
Query: 496 NLLGAMRVISAFXPEIRKTAIETTSKPKPRIINVGSHCGLQPLPAFAAYSASKAG 660
NL G +R A ++K K + R++ V S C LP YS SK G
Sbjct: 184 NLWGPIRTTMA----VKK----LLKKARGRVVTVASICARVGLPGLGPYSVSKYG 230
Score = 35.5 bits (78), Expect = 0.049
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +3
Query: 168 RLVAVTGCDSGLGWAVAARLAREGFITIAG--MHKGIETEAAKALEKL 305
R V +TGCDSG G +A + +G AG +GIE+ +A+A + +
Sbjct: 70 RAVFITGCDSGFGRGLALKCLEQGMPVFAGCLTEQGIESLSAEARKSI 117
>U41749-1|AAB52488.2| 248|Caenorhabditis elegans Dehydrogenases,
short chain protein25 protein.
Length = 248
Score = 35.5 bits (78), Expect = 0.049
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 147 VSAMSVSRLVAVTGCDSGLGWAVAARLAREGF-ITIAGMHKGIETEAAKALEKLCAHT 317
+SA+ R+ VTG SG+G A++ LA+ G + +A + G AKAL +H+
Sbjct: 1 MSALLGGRIAVVTGGASGIGKAISQTLAKHGARVVVADLDSGNAAATAKALPASQSHS 58
Score = 31.9 bits (69), Expect = 0.61
Identities = 28/91 (30%), Positives = 39/91 (42%)
Frame = +1
Query: 415 VVNNAGVMTVGKYEWMTASMIESPVHVNLLGAMRVISAFXPEIRKTAIETTSKPKPRIIN 594
+VN AG+ M +S + VNL G V AF K +++ + P IIN
Sbjct: 86 LVNCAGITKDSTLLKMKQEQWDSVIKVNLTGVFHVSQAFV----KASVDNNNHPL-SIIN 140
Query: 595 VGSHCGLQPLPAFAAYSASKAGXWRXTMSTS 687
V S G Y+A+KAG T S +
Sbjct: 141 VSSIVGKMGNFGQTNYAATKAGVIGFTKSAA 171
>AF003130-7|AAO38638.1| 247|Caenorhabditis elegans Dehydrogenases,
short chain protein2, isoform b protein.
Length = 247
Score = 35.5 bits (78), Expect = 0.049
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +3
Query: 168 RLVAVTGCDSGLGWAVAARLAREGFITIAG--MHKGIETEAAKALEKL 305
R V +TGCDSG G +A + +G AG +GIE+ +A+A + +
Sbjct: 45 RAVFITGCDSGFGRGLALKCLEQGMPVFAGCLTEQGIESLSAEARKSI 92
>U23455-5|AAC46535.1| 305|Caenorhabditis elegans Hypothetical
protein F55E10.6 protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.20
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 168 RLVAVTGCDSGLGWAVAARLAREGFITIAGMHKGIET 278
+ VA++GCDSG G +A RL ++G + K + T
Sbjct: 20 KTVAISGCDSGFGRLLAVRLVKQGVPNGESLKKEVNT 56
>U43283-7|AAC69018.1| 537|Caenorhabditis elegans Hypothetical
protein T25G12.2 protein.
Length = 537
Score = 31.5 bits (68), Expect = 0.80
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +3
Query: 165 SRLVAVTGCDSGLGWAVAARLAREGFITIAGMHKGIETEAAKALEKLCAH---TFPLERN 335
+++V +TG SGLG ++A L + G I + + + L+++CA TFPL +N
Sbjct: 78 NKIVVITGASSGLGKSLAFELYKRGAQVI------LLARSTEKLKEICAELTKTFPLNKN 131
>U43283-4|AAU05548.1| 311|Caenorhabditis elegans Dehydrogenases,
short chain protein30 protein.
Length = 311
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 165 SRLVAVTGCDSGLGWAVAARLAREGFITIAGMHKGIETEAAKALEKLCAHTFPLERN 335
+++V +TG SGLG ++A L + G I TE K + + TFPL +N
Sbjct: 47 NKVVVITGASSGLGKSLAFELYKRGAQVIL---LARSTEKLKEICEELKETFPLNQN 100
>Z74030-5|CAA98438.1| 278|Caenorhabditis elegans Hypothetical
protein D1054.8 protein.
Length = 278
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 168 RLVAVTGCDSGLGWAVAARLAREGF-ITIAGMH 263
++ +TG +G+G A A AREG +TI G H
Sbjct: 7 KVAIITGSSNGIGRATAVLFAREGAKVTITGRH 39
>Z68880-9|CAA93099.1| 255|Caenorhabditis elegans Hypothetical
protein K08F4.9 protein.
Length = 255
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = +1
Query: 415 VVNNAGVM-TVGKYEWMTASMIESPVHVNLLGAMRVISAFXPEIRKTAI----ETTSKPK 579
++NNAG++ + G + + + VN + A+ F P ++K A ++ + +
Sbjct: 87 LINNAGLIESYGTTSAPNRASVLHCIDVNAVSALLASQHFLPLLQKAASHVSGDSLTPDR 146
Query: 580 PRIINVGSHCGLQPL 624
I+N+GS C Q L
Sbjct: 147 AAIVNIGSDCASQAL 161
>Z68879-12|CAA93091.1| 255|Caenorhabditis elegans Hypothetical
protein K08F4.9 protein.
Length = 255
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = +1
Query: 415 VVNNAGVM-TVGKYEWMTASMIESPVHVNLLGAMRVISAFXPEIRKTAI----ETTSKPK 579
++NNAG++ + G + + + VN + A+ F P ++K A ++ + +
Sbjct: 87 LINNAGLIESYGTTSAPNRASVLHCIDVNAVSALLASQHFLPLLQKAASHVSGDSLTPDR 146
Query: 580 PRIINVGSHCGLQPL 624
I+N+GS C Q L
Sbjct: 147 AAIVNIGSDCASQAL 161
>Z81035-3|CAB02732.1| 333|Caenorhabditis elegans Hypothetical
protein C15H11.4 protein.
Length = 333
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 415 VVNNAGVMTVGKYEWMTASMIESPVHVNLLGAMRVISAFXPEIRKTAIETTSKPKPRIIN 594
++NNAG+M K+E T E N LG + F P ++K++ RIIN
Sbjct: 130 LINNAGIMFQSKHE-QTKDGHEKTWQSNHLGPFLLTELFLPAVKKSSY-------ARIIN 181
Query: 595 VGSHCGLQ 618
V S L+
Sbjct: 182 VSSRIHLK 189
>U39997-2|AAK68388.1| 378|Caenorhabditis elegans Dehydrogenases,
short chain protein5 protein.
Length = 378
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 487 VHVNLLGAMRVISAFXPEIRKTAIETTSKPKPRIINVGSHCGLQPLPAFAAYSASKA 657
+ VN +GA +S P + K+ +I+ + S G++P+P AAY A+KA
Sbjct: 194 LRVNGMGAAEFLSCVLPPMEKSG-------GGQIVVLSSSQGVRPIPMLAAYCATKA 243
>Z81457-3|CAB03815.1| 279|Caenorhabditis elegans Hypothetical
protein C01G12.5 protein.
Length = 279
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 168 RLVAVTGCDSGLGWAVAARLAREGF-ITIAG 257
++ VTG +G+G A A LAREG +TI G
Sbjct: 7 KVALVTGSSNGIGRATAILLAREGAKVTITG 37
>Z68299-3|CAA92612.1| 262|Caenorhabditis elegans Hypothetical
protein T04B2.6 protein.
Length = 262
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Frame = +1
Query: 415 VVNNAGVMTVGKYEWMTASMIESPVH---VNLLGAMRVISAFXPEIRKTAIET----TSK 573
++NNAG + YE + ++ + VN +G++ F P ++K A T S
Sbjct: 87 LINNAGCYEL--YETTDSPSRKASLKCFDVNAVGSLMASQLFLPLLKKAAAHTHITGLSA 144
Query: 574 PKPRIINVGSHCGLQ 618
+ I+N+GS C Q
Sbjct: 145 SRAAILNIGSDCSSQ 159
>U80439-3|AAB37640.1| 323|Caenorhabditis elegans Dehydrogenases,
short chain protein1 protein.
Length = 323
Score = 28.7 bits (61), Expect = 5.7
Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 1/116 (0%)
Frame = +1
Query: 283 QRKPSKNCVRTHSL*-NVTRVESVQEFRKYVLTVLKDNPKYKFHAVVNNAGVMTVGKYEW 459
Q + K R H +VT S+ F + + K H ++NNAG+M + +E
Sbjct: 53 QEQSQKEAERIHLFTLDVTNYNSICNFTDEISRMFK-----YLHVIINNAGIMGM-PFE- 105
Query: 460 MTASMIESPVHVNLLGAMRVISAFXPEIRKTAIETTSKPKPRIINVGSHCGLQPLP 627
++ IE N+ G V+ P + KT K + +++ G + + +P
Sbjct: 106 LSVDGIEMHFATNVFGHYVVVERLLPLLLKTD-RPDFKSRVIVVSSGLYRNAEAIP 160
>AF022981-7|AAG24204.1| 280|Caenorhabditis elegans Hypothetical
protein W03F9.9 protein.
Length = 280
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 180 VTGCDSGLGWAVAARLAREGF-ITIAGMHKGIETEAAKALEKL 305
VTG +G+G A A LA EG +TI G + E+ +AL K+
Sbjct: 12 VTGSSNGIGRATAILLASEGAKVTITGRNAERLEESRQALLKV 54
>AC024791-27|AAM43788.1| 254|Caenorhabditis elegans Hypothetical
protein Y47G6A.22 protein.
Length = 254
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/85 (24%), Positives = 37/85 (43%)
Frame = +1
Query: 403 KFHAVVNNAGVMTVGKYEWMTASMIESPVHVNLLGAMRVISAFXPEIRKTAIETTSKPKP 582
+ ++N+AG++ G + + ++VN+ +R+ A P I T K
Sbjct: 81 RIDTLINSAGILRAGPVLDSGIEVYDELMNVNVRSLIRLTRAALPHIITT--------KG 132
Query: 583 RIINVGSHCGLQPLPAFAAYSASKA 657
++NV S G P P Y SK+
Sbjct: 133 TVVNVSSINGPCPFPNVTYYCMSKS 157
>U28739-13|AAK68187.1| 418|Caenorhabditis elegans Dehydrogenases,
short chain protein6 protein.
Length = 418
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 162 VSRLVAVTGCDSGLGWAVAARLAREG 239
V R V +TG G+G +A +LA++G
Sbjct: 8 VGRTVLITGASRGIGKEIALKLAKDG 33
>Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +3
Query: 474 DRKPGPCEFARRDESHFRIXTRNQKNCNRNYKQT*APYNQRW 599
D + P F +D+ F + +KNC N+K+ N W
Sbjct: 814 DLENDPAIFEGQDDPQFEVYREMRKNCKSNWKKFSRRTNLMW 855
>Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +3
Query: 474 DRKPGPCEFARRDESHFRIXTRNQKNCNRNYKQT*APYNQRW 599
D + P F +D+ F + +KNC N+K+ N W
Sbjct: 814 DLENDPAIFEGQDDPQFEVYREMRKNCKSNWKKFSRRTNLMW 855
>Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +3
Query: 474 DRKPGPCEFARRDESHFRIXTRNQKNCNRNYKQT*APYNQRW 599
D + P F +D+ F + +KNC N+K+ N W
Sbjct: 814 DLENDPAIFEGQDDPQFEVYREMRKNCKSNWKKFSRRTNLMW 855
>AL031633-8|CAA21012.1| 296|Caenorhabditis elegans Hypothetical
protein Y39A1A.11 protein.
Length = 296
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 150 SAMSVSRLVAVTGCDSGLGWAVAARLAREGFITIAGMHKGIETEA 284
S M S+L VTG SG+G A+ + A G I K EA
Sbjct: 51 STMLSSKLAIVTGGGSGIGQAICKKFAASGARLIVADLKKSAAEA 95
>AF022978-10|AAG24180.2| 275|Caenorhabditis elegans Hypothetical
protein T01G6.10 protein.
Length = 275
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 174 VAVTGCDSGLGWAVAARLAREGF-ITIAGMHKGIETEAAK 290
V VTG SG+G A A A+ G +TI G G + EA K
Sbjct: 9 VIVTGSSSGIGRATAVLFAKYGAQVTITGRDAG-KLEATK 47
>AC006677-6|AAF39953.1| 279|Caenorhabditis elegans Dehydrogenases,
short chain protein14 protein.
Length = 279
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 168 RLVAVTGCDSGLGWAVAARLAREGF-ITIAG 257
++ VTG +G+G A A LA+EG +TI G
Sbjct: 7 KVALVTGSSNGIGRATAVLLAQEGAKVTITG 37
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,840,298
Number of Sequences: 27780
Number of extensions: 308289
Number of successful extensions: 917
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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