Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_J19
(881 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0713 - 31402534-31403131,31403281-31403430,31403526-31403728 32 0.70
11_06_0291 + 22008412-22012284 31 0.93
12_02_0780 + 23094989-23095380,23096132-23096573,23096687-230973... 31 1.2
03_04_0216 + 18695292-18696139,18696217-18696339,18697027-186972... 30 2.1
07_03_0873 + 22194172-22195434,22195534-22195670,22197531-221976... 30 2.8
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 29 4.9
07_03_1643 + 28329090-28329125,28329260-28329335,28329413-28330305 29 4.9
05_07_0112 - 27755604-27756449,27756624-27756887,27757428-277575... 29 4.9
09_06_0048 + 20477076-20478547,20478643-20478722,20478880-204788... 29 6.5
09_06_0082 + 20749425-20749589,20750137-20750238,20750320-207503... 28 8.6
03_06_0545 - 34643303-34643416,34643442-34643656,34643968-34644070 28 8.6
03_06_0135 + 31928838-31929698,31929783-31929932,31930795-319310... 28 8.6
01_06_0825 - 32245725-32245817,32246015-32248017,32248132-32248162 28 8.6
01_04_0145 + 16709023-16709468,16709789-16710040,16710121-167102... 28 8.6
01_04_0003 - 14989160-14989445,14989673-14989807,14991418-149915... 28 8.6
>01_06_0713 - 31402534-31403131,31403281-31403430,31403526-31403728
Length = 316
Score = 31.9 bits (69), Expect = 0.70
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +3
Query: 306 ENEKDATTEKEAIEISNEKEAGPVTNGESEQKAE 407
ENE A+ E E E E+E+ PV E EQK E
Sbjct: 192 ENESSASAELEVPEPEPEQESEPVVKQEEEQKEE 225
>11_06_0291 + 22008412-22012284
Length = 1290
Score = 31.5 bits (68), Expect = 0.93
Identities = 19/71 (26%), Positives = 37/71 (52%)
Frame = +3
Query: 204 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTN 383
E++ D + + + H HE+ +KE + E +++ EKE E + EK+ G
Sbjct: 443 EEMKDKEKGGEERKEEPH-HEKQEHKKEKEVKEEERKEEQNKEKEEREGTEEKQVG---G 498
Query: 384 GESEQKAENGE 416
GE +++ E+G+
Sbjct: 499 GEKKEEKEDGD 509
>12_02_0780 +
23094989-23095380,23096132-23096573,23096687-23097311,
23098240-23098280,23098371-23098439,23098779-23098879,
23099422-23099500,23099946-23100044,23100123-23100191,
23100283-23100332,23100416-23100497,23100997-23101091,
23101263-23101395
Length = 758
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +3
Query: 243 NGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQK 401
+G++H ++ AKE+ SGT DA A E S+ + + + ESE K
Sbjct: 303 SGESHCSDRDAKEEPTSSGTTTPRGDAPRGAFATEESSPGKTAKMNSDESEGK 355
>03_04_0216 +
18695292-18696139,18696217-18696339,18697027-18697222,
18697361-18697519
Length = 441
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +3
Query: 198 RVEQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPV 377
+VE+ +D + G H H++ K + D G NE D + EKE + S E G
Sbjct: 172 KVERSSDGQITQILYRGQ-HNHQRPPKRRSKDGGALLNEADVSPEKE--DASTRSEQGSQ 228
Query: 378 T-NGESEQKAENGESVTTTPDDG 443
+G+ + + G S + D G
Sbjct: 229 DYSGKFKASNDGGPSSSRRGDRG 251
>07_03_0873 +
22194172-22195434,22195534-22195670,22197531-22197639,
22197739-22197865,22197952-22198012,22199332-22199722
Length = 695
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 213 ADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPV-TNGE 389
A+ +A + + DA + + A + + G E E D E+EA EKE T+GE
Sbjct: 115 AEEEAKEEEELKDAEVEGEGAGS-DSERGEAE-EADGENEEEAAATDGEKEEEAAETDGE 172
Query: 390 SEQKAENGESVTTTPDDG 443
E + E E+ D+G
Sbjct: 173 EEAEEEAAETAGENEDEG 190
>09_04_0087 +
14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = +3
Query: 204 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTN 383
E+ + D K + + + + KEKE GT E EK+ E E E E+E
Sbjct: 212 EEETEKDNEKEKEDKEEETKKDNEKEKEQLMGTDEKEKEKEKEDENEEEKLEEEEKKDKE 271
Query: 384 GESEQKAENGE 416
+ E+K + E
Sbjct: 272 EKLEEKEKENE 282
>07_03_1643 + 28329090-28329125,28329260-28329335,28329413-28330305
Length = 334
Score = 29.1 bits (62), Expect = 4.9
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Frame = +3
Query: 264 EQTAKEKELDSGT------PENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVT 425
E+ AKE ++GT PE EK A +K A + + +KE G V E N ES
Sbjct: 113 EKKAKEAAKEAGTESSEKKPEKEKKAEAKKPAKDDAAKKE-GEVPEKEKGSPEPNKESAA 171
Query: 426 TTPDD 440
D+
Sbjct: 172 AAADE 176
>05_07_0112 - 27755604-27756449,27756624-27756887,27757428-27757532,
27757626-27758249,27759048-27759596,27759665-27760372,
27760449-27760658,27761266-27761421,27761524-27761664,
27762015-27762101,27762209-27762309,27763071-27763293,
27763384-27763548,27763621-27763713,27763801-27764292,
27764729-27764805,27765184-27765681,27765818-27766046
Length = 1855
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 288 LDSGTPENEKDATTEKEAIEISNEKEAGPVTNGESEQKAENGESVTTTPDDG 443
+D G+ +NE+DA +++ E + +A + E AE GE DDG
Sbjct: 1780 MDDGSDDNEEDAEGDEDGEEDGEDYDAEQHVD-EDNDDAEMGEDDVEDNDDG 1830
>09_06_0048 +
20477076-20478547,20478643-20478722,20478880-20478893,
20480164-20481199,20481275-20481402,20481673-20481732,
20481774-20481878,20481971-20482055,20482315-20482470,
20482562-20482831,20482877-20483671,20483844-20483903,
20484062-20485134
Length = 1777
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +3
Query: 276 KEKELDSGTPENEKDATTEKEAIEISN----EKEAGPVTNGESEQKAENGESVTTT 431
++ E E D T E E I ++ EKEA P N ++++ ++VTTT
Sbjct: 333 EDDEAAQNVVEYAVDGTEELETIGLTGDDKAEKEAAPAGNNSADEEGMQMDAVTTT 388
>09_06_0082 +
20749425-20749589,20750137-20750238,20750320-20750384,
20750471-20750588,20750937-20751012,20751304-20751365,
20751457-20751588,20751686-20751739,20751969-20752034,
20752115-20752189,20752271-20752321
Length = 321
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 413 RISYYYSR*RQETKERKSEKEVVAQVYQLQQER*AQTRKEAKGRGD 550
R Y R TK + EKE + ++ Q ++E Q RK+ + RGD
Sbjct: 83 REQYVEKRVNIRTKIEEEEKEKLQKLQQEEEELQMQKRKKRRVRGD 128
>03_06_0545 - 34643303-34643416,34643442-34643656,34643968-34644070
Length = 143
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -1
Query: 266 FMDMGVAINLWF-KCINIG*LLDATFTTSAGCGHLSSAFRFLA 141
F D G+ W+ CI G + + S CGH + + FLA
Sbjct: 29 FDDYGLCCMTWWCPCITFGRVAEIVDRGSTSCGHSGALYVFLA 71
>03_06_0135 +
31928838-31929698,31929783-31929932,31930795-31931065,
31931157-31931249,31931442-31931616,31931715-31931960,
31932100-31932294,31932604-31932802
Length = 729
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 264 EQTAKEKELDSGTPENEKDATTEKEAIEISNEKEAGPVTNGES-EQKAENGE 416
EQ +EKE + PE D +E E + E E ++ G+ ++AE G+
Sbjct: 157 EQDQEEKEAELPMPEESGDGKAPEEESEKAPELELDELSEGDGYGEEAEEGQ 208
>01_06_0825 - 32245725-32245817,32246015-32248017,32248132-32248162
Length = 708
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 246 GDAHIHEQTAKEKELDSGTPENEKDATTEKEAIEISNEK 362
G+A + AKE+E++ +P A E+E IEI + +
Sbjct: 158 GEAELDRADAKEEEIEIPSPRGLDRADAEEEEIEIPSPR 196
>01_04_0145 +
16709023-16709468,16709789-16710040,16710121-16710231,
16710319-16710379,16710481-16710573,16710651-16710836
Length = 382
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 629 EEVKTPSEANEDKTPETPVTEPITNGPAHPRLXRS 733
E + PS A + + ETPV E T PR+ RS
Sbjct: 63 EIFEDPSPAKDPEVQETPVPEKATTSSEVPRVLRS 97
>01_04_0003 -
14989160-14989445,14989673-14989807,14991418-14991508,
14991571-14991712,14991924-14992403,14992610-14993548
Length = 690
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +3
Query: 267 QTAKEKELDSGTPENEKDATTEKEAI--EISNEKEAGPVTNG 386
+T KELDS PENEK ++E + E + KE G G
Sbjct: 298 RTHSPKELDSPRPENEKKGFAQEERLTKERLSIKEKGLTKEG 339
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,864,552
Number of Sequences: 37544
Number of extensions: 236000
Number of successful extensions: 881
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -