Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_J10
(865 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0341 - 42855667-42855849,42855933-42855981,42856165-428562... 153 2e-37
07_01_0874 - 7261191-7261274,7262291-7262440,7262769-7262916,726... 60 3e-09
02_04_0245 + 21262645-21262754,21262851-21262997,21263100-212631... 34 0.13
03_01_0309 - 2432395-2433271,2433494-2434495,2434538-2435073,243... 33 0.22
08_02_0770 - 21018701-21019216,21019246-21019364,21020516-21020675 32 0.68
12_01_0515 + 4081373-4081622,4081725-4081867,4082061-4082219,408... 31 1.2
05_06_0026 - 25024807-25025300,25025432-25025495,25025567-250256... 29 3.6
05_05_0339 + 24213179-24213821,24214402-24214623,24215035-242152... 29 3.6
06_03_0298 - 19272257-19273714 29 4.8
03_01_0096 + 763850-764027,764873-765189,765262-765433,765513-76... 29 4.8
01_06_1031 - 33945681-33945822,33946502-33946641,33946748-339469... 29 4.8
02_04_0363 + 22369461-22370127,22370240-22370310,22370412-223709... 28 8.4
>01_07_0341 -
42855667-42855849,42855933-42855981,42856165-42856219,
42856290-42856410,42856495-42856532,42856612-42856675,
42856778-42856885,42857066-42857187,42857544-42857616,
42857700-42857776,42858521-42858632
Length = 333
Score = 153 bits (371), Expect = 2e-37
Identities = 69/130 (53%), Positives = 93/130 (71%), Gaps = 1/130 (0%)
Frame = +2
Query: 161 MADKQPKNKVCIVGSGNWGSAIAKIVGRNAASLSNFEDRVTMWVYEEIIE-GKKLTEIIN 337
M + KN V ++GSGNWGS ++++ N A L +F D V MWV+EEI+ GKKL+E IN
Sbjct: 1 MENGHAKNLVAVIGSGNWGSVASRLIASNTAKLPSFHDEVRMWVFEEILPTGKKLSESIN 60
Query: 338 ETHENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAA 517
+ +EN KYLPG KL +NV+A PD+ A KDA++L+FV PHQFV IC L+GK++P
Sbjct: 61 QANENCKYLPGIKLGANVIADPDLENAVKDANMLVFVTPHQFVEGICKKLVGKLRPGTEG 120
Query: 518 LSLIKGFDIA 547
+SLIKG +IA
Sbjct: 121 ISLIKGMEIA 130
Score = 37.5 bits (83), Expect = 0.014
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 639 EVAEEKFCETTIGCR-DVMLAPLMRDIIQTDYFRGRGGGX*XXXRNMWSVKNIVXVGAGF 815
E+A EKF E TIG + D +A + T YF ++KN+V + AG
Sbjct: 128 EIAVEKFSEATIGYKKDKEVATRWAKLFTTPYFLVSVVEDIEGVELCGTLKNVVAIAAGL 187
Query: 816 VDGLGYGDTQR 848
VDGL G+ +
Sbjct: 188 VDGLDMGNNTK 198
>07_01_0874 -
7261191-7261274,7262291-7262440,7262769-7262916,
7263136-7263259,7263452-7263653,7263743-7263848,
7263979-7264442
Length = 425
Score = 59.7 bits (138), Expect = 3e-09
Identities = 41/140 (29%), Positives = 66/140 (47%)
Frame = +2
Query: 185 KVCIVGSGNWGSAIAKIVGRNAASLSNFEDRVTMWVYEEIIEGKKLTEIINETHENVKYL 364
KV ++G G++G+A+A V A L V+M + ++++ IN +H N KYL
Sbjct: 109 KVVVLGGGSFGTAMAAQVAAKKADLE-----VSMLLRDDLV-----CRSINHSHINCKYL 158
Query: 365 PGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSLIKGFDI 544
H+LP N+ A +A AD VP QF + + + P +SL KG ++
Sbjct: 159 RDHRLPENITATTSASDALAGADFCFHAVPVQFSSSFLEGISTHVDPKLPFISLSKGLEL 218
Query: 545 AEGGGIDLISHIITRCLKIP 604
+ +S II + L P
Sbjct: 219 ---NTLRTMSQIIPQALGNP 235
>02_04_0245 +
21262645-21262754,21262851-21262997,21263100-21263156,
21263256-21263442,21264700-21264925,21265474-21266003
Length = 418
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 143 DCNILDMADKQPKNKVCIVGSGNWGSAIAKIVGRNAAS 256
DC +L MAD ++G W S +A+ VG A S
Sbjct: 152 DCTVLTMADDSTIKAKVVIGCDGWNSVVARYVGLGAPS 189
>03_01_0309 -
2432395-2433271,2433494-2434495,2434538-2435073,
2435579-2435716,2436050-2436148,2436278-2436346,
2436968-2437063
Length = 938
Score = 33.5 bits (73), Expect = 0.22
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = -1
Query: 646 ATSDAILAPINTATGNF*ASCNNM*YKIDATTFGYIKSLNQRQSSCSWLYFSKQSRADSS 467
A+ + +LAP++ ASCN + Y AT LN S S LY +
Sbjct: 541 ASPEEVLAPLSALRKLARASCNILSYASSATIDQIYTMLNDSSSKSSILYLALLMEGFPF 600
Query: 466 DKLMRHHKY*KI-SIFCSF-NYIWNSN 392
D L R K + ++F SF Y+ N N
Sbjct: 601 DSLSRGVKEHAVKTLFTSFAGYLQNQN 627
>08_02_0770 - 21018701-21019216,21019246-21019364,21020516-21020675
Length = 264
Score = 31.9 bits (69), Expect = 0.68
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = -2
Query: 681 DNQWSFRRIFPQQPPMQYWLPL 616
D++W R+F +QPP+++WL +
Sbjct: 93 DSEWVICRVFKKQPPIEHWLEM 114
>12_01_0515 +
4081373-4081622,4081725-4081867,4082061-4082219,
4082339-4082518,4082616-4082845,4082959-4083099,
4083366-4083420
Length = 385
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/66 (25%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Frame = -2
Query: 660 RIFPQQPPMQYWLPLIQQQG--IFRHLV----IICDIRSMPPPSAISNPLIKDRAAAVGF 499
R +P PP++Y+ L++Q+ + ++ ++ ++ +PPP + P++ +RA G
Sbjct: 37 RAYP--PPIKYFEALLRQEHAELLEYVDDVDRVVALLKPLPPPKTVRYPVLFERAWGFGR 94
Query: 498 IFPSKV 481
+FP V
Sbjct: 95 LFPCDV 100
>05_06_0026 -
25024807-25025300,25025432-25025495,25025567-25025662,
25025719-25025929,25026616-25026690,25026820-25027037
Length = 385
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 545 AEGGGIDLISHIITRCLKIPCCCINGSQYCIGGC 646
A+G G + +RCLK+ C C G YC C
Sbjct: 80 ADGNGCKHCACKKSRCLKLYCPCFAGGGYCSEKC 113
>05_05_0339 +
24213179-24213821,24214402-24214623,24215035-24215282,
24215385-24215524,24215579-24215753
Length = 475
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = +3
Query: 606 VAVLMGANIASEVAEEKFCETTIGCRDVMLAPLMRDIIQTDYFRGRGGGX*XXXRNMWSV 785
+ L G NIASE+ +++ I D PL + ++ +F M +
Sbjct: 222 ILYLGGPNIASEIYNKEYANARICGADKWRKPLAK-FLRQPHFIVWDNSDLITHEVMGGL 280
Query: 786 KNIVXVGAGFVDGL 827
KNI +GAG V L
Sbjct: 281 KNIYAIGAGMVAAL 294
>06_03_0298 - 19272257-19273714
Length = 485
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +2
Query: 179 KNKVCIVGSGNWGSAIAKIVGRNAASLSNFEDRVTM---WVYE 298
K KVC+VG G G A A+ + R +S E R + W+Y+
Sbjct: 2 KKKVCVVGGGLVGLAAARELQREGHDVSVLEQRGGVGGQWLYD 44
>03_01_0096 +
763850-764027,764873-765189,765262-765433,765513-765586,
765658-765835,765917-766026,766122-766221,766305-766391,
766505-766681,766847-767120,767201-767362,767450-767665,
767744-767781,768044-768102,768214-768339,768415-768540,
768642-768695,768789-768851,768924-768986,769079-769141,
769232-769732
Length = 1045
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +2
Query: 224 IAKIVGRNAASLSNFEDRVTMWVYEEIIEGKKLTEIINETHENVK 358
++K++G ++ ED + + YEE+ + KKL I+ ET N++
Sbjct: 366 LSKMIGAVQTLVAQCED-LKLKYYEEMAKRKKLHNIVEETKGNIR 409
>01_06_1031 -
33945681-33945822,33946502-33946641,33946748-33946995,
33947355-33947576,33948188-33948839
Length = 467
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +3
Query: 606 VAVLMGANIASEVAEEKFCETTIGCRDVMLAPLMRDIIQTDYFRGRGGGX*XXXRNMWSV 785
+ L G NIASE+ +++ I D PL + ++ +F M +
Sbjct: 225 ILYLGGPNIASEIYNKEYANARICGADKWRKPLAK-FLRQPHFIVWDNSDLITHEVMGGL 283
Query: 786 KNIVXVGAGFVDGL 827
KN+ +GAG V L
Sbjct: 284 KNVYAIGAGMVAAL 297
>02_04_0363 +
22369461-22370127,22370240-22370310,22370412-22370978,
22371056-22371301
Length = 516
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 158 DMADKQPKNKVCIVGSGNWGSAIAKIVGRNAASLSNFE---DRVTMWVYEE 301
D+ + KVC++G+G G A A+ + R +++ E D W+Y++
Sbjct: 7 DVGKPRASRKVCVIGAGMAGLAAARELRREGHAVTVLEQAGDVGGQWLYDD 57
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,193,094
Number of Sequences: 37544
Number of extensions: 451123
Number of successful extensions: 1210
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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