Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_J10
(865 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 244 8e-67
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 26 0.39
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 25 0.90
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 25 1.2
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 25 1.2
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 25 1.2
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 25 1.2
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 25 1.2
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 25 1.2
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 25 1.2
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 2.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.7
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.7
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 23 3.6
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 3.6
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 4.8
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 4.8
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 4.8
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 8.4
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 8.4
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 244 bits (597), Expect = 8e-67
Identities = 112/149 (75%), Positives = 129/149 (86%)
Frame = +2
Query: 179 KNKVCIVGSGNWGSAIAKIVGRNAASLSNFEDRVTMWVYEEIIEGKKLTEIINETHENVK 358
K ++CIVGSGNWGS IAKI+G NAA+ SNFEDRVTM+VYEEII GKKLTEIINETHENVK
Sbjct: 4 KLRICIVGSGNWGSTIAKIIGINAANFSNFEDRVTMYVYEEIINGKKLTEIINETHENVK 63
Query: 359 YLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSLIKGF 538
YLPGHKLP N++A+PDVVEAAKDAD+L FVVPHQF++ ICS L GKIKPTA LSLIKGF
Sbjct: 64 YLPGHKLPPNIIAIPDVVEAAKDADILTFVVPHQFIKRICSALFGKIKPTAIGLSLIKGF 123
Query: 539 DIAEGGGIDLISHIITRCLKIPCCCINGS 625
D +GGGI+LISHII++ L IP + G+
Sbjct: 124 DKKQGGGIELISHIISKQLHIPVSVLMGA 152
Score = 93.9 bits (223), Expect = 2e-21
Identities = 45/95 (47%), Positives = 64/95 (67%)
Frame = +3
Query: 564 ILYHILLQDA*KFPVAVLMGANIASEVAEEKFCETTIGCRDVMLAPLMRDIIQTDYFRGR 743
++ HI+ + PV+VLMGAN+ASEVA E FCETTIGC+D +AP+++D+++T YF+
Sbjct: 133 LISHIISKQL-HIPVSVLMGANLASEVANEMFCETTIGCKDKNMAPILKDLMETSYFKVV 191
Query: 744 GGGX*XXXRNMWSVKNIVXVGAGFVDGLGYGDTQR 848
++KNIV GAGF+DGLG GD +
Sbjct: 192 VVEDVDSVECCGALKNIVACGAGFIDGLGLGDNTK 226
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 26.2 bits (55), Expect = 0.39
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 315 FPSIISSYTHIVTLSSKFDRLAAFRPTIFAIAEPQFP 205
F S+ ++ T S F ++ A PT+F+ P+FP
Sbjct: 332 FWSLRKAFARKKTDYSSFGKILATEPTLFSNVTPKFP 368
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.0 bits (52), Expect = 0.90
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 654 FPQQPPMQYWLPLIQQQGIFRHLVIICDIRSMPPPSA 544
FP +P M W+P+ +Q FRH+ PP+A
Sbjct: 132 FPSRP-MGPWVPMQEQIPRFRHIGPSTPFPQFIPPNA 167
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 1.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 654 FPQQPPMQYWLPLIQQQGIFRHLVIICDIRSMPPPSA 544
FP +P M W+P+ +Q FRH+ PP+A
Sbjct: 132 FPSRP-MGPWVPMQEQIPRFRHIGPSTPFPRFIPPNA 167
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 1.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 654 FPQQPPMQYWLPLIQQQGIFRHLVIICDIRSMPPPSA 544
FP +P M W+P+ +Q FRH+ PP+A
Sbjct: 132 FPSRP-MGPWVPMQEQIPRFRHIGPSTPFPRFIPPNA 167
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 1.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 654 FPQQPPMQYWLPLIQQQGIFRHLVIICDIRSMPPPSA 544
FP +P M W+P+ +Q FRH+ PP+A
Sbjct: 132 FPSRP-MGPWVPMQEQIPRFRHIGPSTPFPRFIPPNA 167
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 1.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 654 FPQQPPMQYWLPLIQQQGIFRHLVIICDIRSMPPPSA 544
FP +P M W+P+ +Q FRH+ PP+A
Sbjct: 132 FPSRP-MGPWVPMQEQIPRFRHIGPSTPFPRFIPPNA 167
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 1.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 654 FPQQPPMQYWLPLIQQQGIFRHLVIICDIRSMPPPSA 544
FP +P M W+P+ +Q FRH+ PP+A
Sbjct: 132 FPSRP-MGPWVPMQEQIPRFRHIGPSTPFPRFIPPNA 167
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 1.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 654 FPQQPPMQYWLPLIQQQGIFRHLVIICDIRSMPPPSA 544
FP +P M W+P+ +Q FRH+ PP+A
Sbjct: 132 FPSRP-MGPWVPMQEQIPRFRHIGPSTPFPRFIPPNA 167
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 24.6 bits (51), Expect = 1.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 654 FPQQPPMQYWLPLIQQQGIFRHLVIICDIRSMPPPSA 544
FP +P M W+P+ +Q FRH+ PP+A
Sbjct: 135 FPSRP-MGPWVPMQEQIPRFRHIGPSTPFPRFIPPNA 170
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.4 bits (48), Expect = 2.7
Identities = 16/60 (26%), Positives = 20/60 (33%)
Frame = -3
Query: 821 IHETRTHXHNVFNAPHISXXXXXXXXXTPEVVCLYDIPH*RSQHYVPTTNGRFAEFFLSN 642
IH T H H+ PH P + + PH + P T G E L N
Sbjct: 426 IHATPHHHHSHAATPHHQHSTPLAHSSYPAAIQIGHTPH--HHPHPPETPGPQVETILQN 483
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 671 HWLSGRNAGSVNAGY 715
HW SG N G+ GY
Sbjct: 1423 HWKSGHNGGASLTGY 1437
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 671 HWLSGRNAGSVNAGY 715
HW SG N G+ GY
Sbjct: 1419 HWKSGHNGGASLTGY 1433
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 23.0 bits (47), Expect = 3.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 654 FPQQPPMQYWLPLIQQQGIFRHLVIICDIRSMPPPSA 544
FP +P M W+ + +Q FRH+ + PP+A
Sbjct: 127 FPPRP-MGPWISIQEQIPRFRHIGPLTPFPRFIPPNA 162
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.0 bits (47), Expect = 3.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 654 FPQQPPMQYWLPLIQQQGIFRHLVIICDIRSMPPPSA 544
FP +P M W+ + +Q FRH+ + PP+A
Sbjct: 368 FPPRP-MGPWISIQEQIPRFRHIGPLTPFPRFIPPNA 403
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 4.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 318 FFPSIISSYTHIVTLSSKFDRL 253
FF + SY HI T S++F R+
Sbjct: 99 FFVNEKQSYFHIATTSNEFIRI 120
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 4.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 318 FFPSIISSYTHIVTLSSKFDRL 253
FF + SY HI T S++F R+
Sbjct: 99 FFVNEKQSYFHIATTSNEFIRI 120
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 22.6 bits (46), Expect = 4.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 318 FFPSIISSYTHIVTLSSKFDRL 253
FF + SY HI T S++F R+
Sbjct: 38 FFVNEKQSYFHIATTSNEFIRI 59
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 8.4
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -2
Query: 675 QWSFRRIFPQQPPMQYWLPLI 613
QW+ R+ P +++W+PL+
Sbjct: 486 QWTCRQPEPLIELIEHWMPLL 506
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 8.4
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -2
Query: 654 FPQQPPMQYWLPLIQQQGIFRHLVIICDIRSMPPPSA 544
FP +P M W+ + +Q FRH+ PP+A
Sbjct: 357 FPPRP-MGPWISIQEQIPRFRHIGPSTSFPRFIPPNA 392
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,520
Number of Sequences: 438
Number of extensions: 5187
Number of successful extensions: 26
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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