BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_J03
(897 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl c... 24 7.2
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 23 9.5
>AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl
cyclase beta subunit protein.
Length = 649
Score = 23.8 bits (49), Expect = 7.2
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +2
Query: 377 LNLWIKRRSSXKVHPEGKFVVDLDKNVDINDVTAN 481
LN+W + + +V+ EG+F+V + + +D+T N
Sbjct: 18 LNIWEQIKKKAQVNMEGQFLV---RQIYEDDITYN 49
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 23.4 bits (48), Expect = 9.5
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +3
Query: 597 MVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 716
+VGG +++ ++E K +L + L PKG L++
Sbjct: 390 IVGGACADVEQTIHLVEKFKKRKKLEEILNGGNPKGTLVF 429
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 781,049
Number of Sequences: 2352
Number of extensions: 14281
Number of successful extensions: 27
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96747534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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