Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_J03
(897 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 208 3e-54
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 207 9e-54
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 207 9e-54
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 142 2e-34
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 137 1e-32
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 128 7e-30
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 122 5e-28
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 117 1e-26
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 117 1e-26
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 115 4e-26
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 108 5e-24
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 107 1e-23
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 107 1e-23
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 92 6e-19
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 91 1e-18
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 85 6e-17
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 83 2e-16
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 83 3e-16
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 83 3e-16
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 83 3e-16
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 83 3e-16
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 83 3e-16
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 83 3e-16
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 83 3e-16
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 82 5e-16
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 82 5e-16
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 81 1e-15
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 80 2e-15
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 79 3e-15
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 78 7e-15
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 75 5e-14
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 75 5e-14
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 74 2e-13
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 70 3e-12
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 70 3e-12
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 68 8e-12
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 68 8e-12
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 68 8e-12
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 66 3e-11
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 66 3e-11
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 66 3e-11
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 66 4e-11
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 66 4e-11
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 66 4e-11
Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 36 0.039
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 36 0.039
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 32 0.64
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 32 0.64
AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical ... 32 0.64
AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans nonsense-medi... 31 1.1
AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor wi... 31 1.1
Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical pr... 30 2.6
L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical p... 29 3.4
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 29 4.5
U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna replic... 29 4.5
AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical ... 29 4.5
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 29 6.0
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 208 bits (509), Expect = 3e-54
Identities = 106/124 (85%), Positives = 109/124 (87%)
Frame = +3
Query: 486 VSLFATKAILYTKYYPTKSILLXSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHP 665
V+L A L+ K P K L SLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHP
Sbjct: 124 VALRADSYALH-KLLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHP 182
Query: 666 ELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGXXMVR 845
ELFDALGIAQPKGVLL+GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEG MVR
Sbjct: 183 ELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVR 242
Query: 846 ELFV 857
ELFV
Sbjct: 243 ELFV 246
Score = 80.2 bits (189), Expect = 2e-15
Identities = 34/53 (64%), Positives = 43/53 (81%)
Frame = +2
Query: 392 KRRSSXKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPL 550
K++ KVHPEGK+VVD+DK++DIN + RVALR +SY LHK+LPNKVDPL
Sbjct: 92 KKKVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNKVDPL 144
Score = 73.7 bits (173), Expect = 2e-13
Identities = 37/61 (60%), Positives = 43/61 (70%)
Frame = +1
Query: 208 RPYYITKLEXLQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 387
R Y+ TK++ Q VA+KSQN+RRLQAQRNELN KVRML+ GSYVGEV K M
Sbjct: 31 RKYFSTKVDDAQQKVADKSQNVRRLQAQRNELNTKVRMLKEELQQLHEQGSYVGEVSKAM 90
Query: 388 D 390
D
Sbjct: 91 D 91
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 859 MAREHAPSIIFMD 897
MAREHAPSIIFMD
Sbjct: 247 MAREHAPSIIFMD 259
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 207 bits (505), Expect = 9e-54
Identities = 106/133 (79%), Positives = 113/133 (84%)
Frame = +3
Query: 459 ILTMSRPIVVSLFATKAILYTKYYPTKSILLXSLMMVEKVPDSTYEMVGGLDKQIKEIKE 638
I T++ V+L A ++ + P+K L SLMMVEKVPDSTYEMVGGLD QIKEIKE
Sbjct: 110 ISTLAAGTRVALRADNYAIH-EVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKE 168
Query: 639 VIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKF 818
VIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKF
Sbjct: 169 VIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKF 228
Query: 819 IGEGXXMVRELFV 857
IGEG MVRELFV
Sbjct: 229 IGEGARMVRELFV 241
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/61 (54%), Positives = 41/61 (67%)
Frame = +1
Query: 208 RPYYITKLEXLQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 387
RPY+ TK+E + VAEKS N+RRL AQ+ ELN KVR+L+ GS+VGEV K M
Sbjct: 26 RPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAM 85
Query: 388 D 390
D
Sbjct: 86 D 86
Score = 64.1 bits (149), Expect = 1e-10
Identities = 26/53 (49%), Positives = 41/53 (77%)
Frame = +2
Query: 392 KRRSSXKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPL 550
K++ K HP+GK++VD+ +VDI+ + A RVALR ++Y +H++LP+KVDPL
Sbjct: 87 KKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPL 139
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 859 MAREHAPSIIFMD 897
MAREHAPSIIFMD
Sbjct: 242 MAREHAPSIIFMD 254
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 207 bits (505), Expect = 9e-54
Identities = 106/133 (79%), Positives = 113/133 (84%)
Frame = +3
Query: 459 ILTMSRPIVVSLFATKAILYTKYYPTKSILLXSLMMVEKVPDSTYEMVGGLDKQIKEIKE 638
I T++ V+L A ++ + P+K L SLMMVEKVPDSTYEMVGGLD QIKEIKE
Sbjct: 131 ISTLAAGTRVALRADNYAIH-EVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKE 189
Query: 639 VIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKF 818
VIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKF
Sbjct: 190 VIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKF 249
Query: 819 IGEGXXMVRELFV 857
IGEG MVRELFV
Sbjct: 250 IGEGARMVRELFV 262
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/61 (54%), Positives = 41/61 (67%)
Frame = +1
Query: 208 RPYYITKLEXLQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 387
RPY+ TK+E + VAEKS N+RRL AQ+ ELN KVR+L+ GS+VGEV K M
Sbjct: 47 RPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAM 106
Query: 388 D 390
D
Sbjct: 107 D 107
Score = 64.1 bits (149), Expect = 1e-10
Identities = 26/53 (49%), Positives = 41/53 (77%)
Frame = +2
Query: 392 KRRSSXKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPL 550
K++ K HP+GK++VD+ +VDI+ + A RVALR ++Y +H++LP+KVDPL
Sbjct: 108 KKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPL 160
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 859 MAREHAPSIIFMD 897
MAREHAPSIIFMD
Sbjct: 263 MAREHAPSIIFMD 275
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 142 bits (345), Expect = 2e-34
Identities = 63/102 (61%), Positives = 82/102 (80%)
Frame = +3
Query: 549 LXSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPG 728
+ S+M +EK P TY VGGLD+QI+EIKE +ELP+ HPE ++ +GI PKGV+LYG PG
Sbjct: 173 MVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPG 232
Query: 729 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGXXMVRELF 854
TGKTLLA+AVA+ T TF+R+ GSEL+QK++G+G MVRELF
Sbjct: 233 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELF 274
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 137 bits (331), Expect = 1e-32
Identities = 66/108 (61%), Positives = 80/108 (74%)
Frame = +3
Query: 531 PTKSILLXSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 710
P K ++M VE+ PD TY VGG QI++++EV+E P+ HPE + LGI PKGVL
Sbjct: 156 PAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVL 215
Query: 711 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGXXMVRELF 854
LYGPPGTGKTL ARAVA+ T+ FIRV GSELVQK++GEG MVRELF
Sbjct: 216 LYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF 263
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +2
Query: 428 KFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDP 547
KFVVDL +V D+ RV + Y +H LP K+DP
Sbjct: 122 KFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDP 161
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 128 bits (308), Expect = 7e-30
Identities = 56/96 (58%), Positives = 75/96 (78%)
Frame = +3
Query: 567 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 746
VEK P T++ +GG + QI+E+KE +ELP+ HPE ++ +GI PKGV+LYG PGTGKTLL
Sbjct: 174 VEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLL 233
Query: 747 ARAVAHHTECTFIRVSGSELVQKFIGEGXXMVRELF 854
A+AVA+ T TFIR +GS+LVQK GEG +VR++F
Sbjct: 234 AKAVANSTSATFIRATGSDLVQKQSGEGARLVRQIF 269
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 122 bits (293), Expect = 5e-28
Identities = 53/99 (53%), Positives = 76/99 (76%)
Frame = +3
Query: 558 LMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 737
++ ++ PD +Y +GGLD Q +E++E +ELP+ H EL+ +GI P+GVL+YGPPG GK
Sbjct: 149 MLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGK 208
Query: 738 TLLARAVAHHTECTFIRVSGSELVQKFIGEGXXMVRELF 854
T+LA+AVA +T +FIRV GSE VQK++GEG MVR++F
Sbjct: 209 TMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVF 247
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 117 bits (282), Expect = 1e-26
Identities = 52/89 (58%), Positives = 69/89 (77%)
Frame = +3
Query: 588 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 767
+Y VGGL +QI+E++EV+ELP+ +PELF +GI PKG LL+GPPGTGKTLLARAVA
Sbjct: 140 SYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQ 199
Query: 768 TECTFIRVSGSELVQKFIGEGXXMVRELF 854
+C F++V S +V K+IGE M+RE+F
Sbjct: 200 LDCNFLKVVSSAIVDKYIGESARMIREMF 228
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 117 bits (282), Expect = 1e-26
Identities = 52/89 (58%), Positives = 69/89 (77%)
Frame = +3
Query: 588 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 767
+Y VGGL +QI+E++EV+ELP+ +PELF +GI PKG LL+GPPGTGKTLLARAVA
Sbjct: 148 SYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQ 207
Query: 768 TECTFIRVSGSELVQKFIGEGXXMVRELF 854
+C F++V S +V K+IGE M+RE+F
Sbjct: 208 LDCNFLKVVSSAIVDKYIGESARMIREMF 236
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 115 bits (277), Expect = 4e-26
Identities = 52/98 (53%), Positives = 72/98 (73%)
Frame = +3
Query: 561 MMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKT 740
M V++ P Y +GG DKQI+E+ E + LP+ H + F LGI PKGVL+YGPPGTGKT
Sbjct: 166 MEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKT 225
Query: 741 LLARAVAHHTECTFIRVSGSELVQKFIGEGXXMVRELF 854
++ARAVA T+ TF++++G +LVQ FIG+G +VR+ F
Sbjct: 226 MMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAF 263
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 108 bits (260), Expect = 5e-24
Identities = 47/95 (49%), Positives = 70/95 (73%)
Frame = +3
Query: 570 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 749
E + D Y+ +GG+ KQ+ +IKE++ELP++HP+LF A+GI P+G+LL+GPPGTGKTL+A
Sbjct: 202 ESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIA 261
Query: 750 RAVAHHTECTFIRVSGSELVQKFIGEGXXMVRELF 854
RAVA+ T F ++G E++ K GE +R+ F
Sbjct: 262 RAVANETGSFFFLINGPEVMSKMSGESESNLRKAF 296
Score = 94.3 bits (224), Expect = 1e-19
Identities = 40/96 (41%), Positives = 64/96 (66%)
Frame = +3
Query: 567 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 746
V + P++T+ +GGL +E++E+++ PV+HPE + G+ +GVL YGPPG GKTLL
Sbjct: 474 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 533
Query: 747 ARAVAHHTECTFIRVSGSELVQKFIGEGXXMVRELF 854
A+A+A+ + FI + G EL+ + GE VR++F
Sbjct: 534 AKAIANECQANFISIKGPELLTMWFGESEANVRDVF 569
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 107 bits (257), Expect = 1e-23
Identities = 45/100 (45%), Positives = 72/100 (72%)
Frame = +3
Query: 570 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 749
E + + Y+ +GG+ KQ+ +IKE++ELP++HP+LF A+G+ P+G+LL+GPPGTGKTL+A
Sbjct: 201 EALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIA 260
Query: 750 RAVAHHTECTFIRVSGSELVQKFIGEGXXMVRELFVNGQR 869
RAVA+ T F ++G E++ K GE +R+ F ++
Sbjct: 261 RAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEK 300
Score = 94.3 bits (224), Expect = 1e-19
Identities = 40/96 (41%), Positives = 64/96 (66%)
Frame = +3
Query: 567 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 746
V + P++T+ +GGL +E++E+++ PV+HPE + G+ +GVL YGPPG GKTLL
Sbjct: 473 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 532
Query: 747 ARAVAHHTECTFIRVSGSELVQKFIGEGXXMVRELF 854
A+A+A+ + FI + G EL+ + GE VR++F
Sbjct: 533 AKAIANECQANFISIKGPELLTMWFGESEANVRDVF 568
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 107 bits (257), Expect = 1e-23
Identities = 45/100 (45%), Positives = 72/100 (72%)
Frame = +3
Query: 570 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 749
E + + Y+ +GG+ KQ+ +IKE++ELP++HP+LF A+G+ P+G+LL+GPPGTGKTL+A
Sbjct: 201 EALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIA 260
Query: 750 RAVAHHTECTFIRVSGSELVQKFIGEGXXMVRELFVNGQR 869
RAVA+ T F ++G E++ K GE +R+ F ++
Sbjct: 261 RAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEK 300
Score = 94.3 bits (224), Expect = 1e-19
Identities = 40/96 (41%), Positives = 64/96 (66%)
Frame = +3
Query: 567 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 746
V + P++T+ +GGL +E++E+++ PV+HPE + G+ +GVL YGPPG GKTLL
Sbjct: 473 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 532
Query: 747 ARAVAHHTECTFIRVSGSELVQKFIGEGXXMVRELF 854
A+A+A+ + FI + G EL+ + GE VR++F
Sbjct: 533 AKAIANECQANFISIKGPELLTMWFGESEANVRDVF 568
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 91.9 bits (218), Expect = 6e-19
Identities = 40/94 (42%), Positives = 61/94 (64%)
Frame = +3
Query: 573 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 752
+VP+ ++ +GG ++ EI++ + P KHPE F+ GI P G+LLYGPPG KTL+AR
Sbjct: 452 EVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPGCSKTLIAR 511
Query: 753 AVAHHTECTFIRVSGSELVQKFIGEGXXMVRELF 854
A+A + F+ V G EL K++G+ +R+LF
Sbjct: 512 ALASEAKMNFLAVKGPELFSKWVGDSEKAIRDLF 545
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 696 PKGVLLYGPPGTGKTLLARAVA 761
P VL++G PG+GKTLL + VA
Sbjct: 272 PCSVLIWGLPGSGKTLLLKEVA 293
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 90.6 bits (215), Expect = 1e-18
Identities = 41/85 (48%), Positives = 57/85 (67%)
Frame = +3
Query: 600 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT 779
V GL+ K ++E++ LP K P++F + A PKGVLL+GPPGTGKT++ R VA + T
Sbjct: 318 VAGLEGAKKALREIVVLPFKRPDVFTGIR-APPKGVLLFGPPGTGKTMIGRCVASQCKAT 376
Query: 780 FIRVSGSELVQKFIGEGXXMVRELF 854
F +S S L K++GEG +VR LF
Sbjct: 377 FFNISASSLTSKWVGEGEKLVRALF 401
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 85.0 bits (201), Expect = 6e-17
Identities = 43/94 (45%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Frame = +3
Query: 576 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI-AQPKGVLLYGPPGTGKTLLAR 752
VPD +++ +G L + K+++ I P+K + F ALGI +P+G+LL GPPG GKTLLA+
Sbjct: 527 VPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAK 586
Query: 753 AVAHHTECTFIRVSGSELVQKFIGEGXXMVRELF 854
AVA+ T FI V G EL+ ++GE VR +F
Sbjct: 587 AVANETGMNFISVKGPELLNMYVGESERAVRTVF 620
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/88 (36%), Positives = 53/88 (60%)
Frame = +3
Query: 591 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 770
+E +GG D+Q E+ + + +K P+ F LG+ P+G +++GPPG GKT+ A+AVA
Sbjct: 205 FEHIGGADRQFLEVCR-LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGEL 263
Query: 771 ECTFIRVSGSELVQKFIGEGXXMVRELF 854
++++ +ELV GE +R LF
Sbjct: 264 AIPMLQLAATELVSGVSGETEEKIRRLF 291
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 83.4 bits (197), Expect = 2e-16
Identities = 42/94 (44%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Frame = +3
Query: 576 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI-AQPKGVLLYGPPGTGKTLLAR 752
VPD +++ +G L + K+++ I P+K + F ALGI +P+G+LL GPPG GKTLLA+
Sbjct: 527 VPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAK 586
Query: 753 AVAHHTECTFIRVSGSELVQKFIGEGXXMVRELF 854
AVA+ T F V G EL+ ++GE VR +F
Sbjct: 587 AVANETGMNFFSVKGPELLNMYVGESERAVRTVF 620
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/88 (36%), Positives = 53/88 (60%)
Frame = +3
Query: 591 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 770
+E +GG D+Q E+ + + +K P+ F LG+ P+G +++GPPG GKT+ A+AVA
Sbjct: 205 FEHIGGADRQFLEVCR-LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGEL 263
Query: 771 ECTFIRVSGSELVQKFIGEGXXMVRELF 854
++++ +ELV GE +R LF
Sbjct: 264 AIPMLQLAATELVSGVSGETEEKIRRLF 291
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Frame = +3
Query: 591 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH- 767
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 449
Query: 768 ----TECTFIRVSGSELVQKFIGEGXXMVRELF 854
+ F G++ + K++GE +R LF
Sbjct: 450 RRGANKVAFFMRKGADCLSKWVGESERQLRLLF 482
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Frame = +3
Query: 591 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH- 767
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 388 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 447
Query: 768 ----TECTFIRVSGSELVQKFIGEGXXMVRELF 854
+ F G++ + K++GE +R LF
Sbjct: 448 RRGANKVAFFMRKGADCLSKWVGESERQLRLLF 480
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Frame = +3
Query: 591 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH- 767
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 449
Query: 768 ----TECTFIRVSGSELVQKFIGEGXXMVRELF 854
+ F G++ + K++GE +R LF
Sbjct: 450 RRGANKVAFFMRKGADCLSKWVGESERQLRLLF 482
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Frame = +3
Query: 591 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH- 767
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 449
Query: 768 ----TECTFIRVSGSELVQKFIGEGXXMVRELF 854
+ F G++ + K++GE +R LF
Sbjct: 450 RRGANKVAFFMRKGADCLSKWVGESERQLRLLF 482
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Frame = +3
Query: 591 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH- 767
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 388 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 447
Query: 768 ----TECTFIRVSGSELVQKFIGEGXXMVRELF 854
+ F G++ + K++GE +R LF
Sbjct: 448 RRGANKVAFFMRKGADCLSKWVGESERQLRLLF 480
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Frame = +3
Query: 591 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH- 767
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 449
Query: 768 ----TECTFIRVSGSELVQKFIGEGXXMVRELF 854
+ F G++ + K++GE +R LF
Sbjct: 450 RRGANKVAFFMRKGADCLSKWVGESERQLRLLF 482
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Frame = +3
Query: 591 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH- 767
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGPPGTGKTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 449
Query: 768 ----TECTFIRVSGSELVQKFIGEGXXMVRELF 854
+ F G++ + K++GE +R LF
Sbjct: 450 RRGANKVAFFMRKGADCLSKWVGESERQLRLLF 482
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical protein
C11H1.4a protein.
Length = 996
Score = 82.2 bits (194), Expect = 5e-16
Identities = 41/96 (42%), Positives = 62/96 (64%)
Frame = +3
Query: 588 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 767
T E VGG+ +Q K +++VI P K+P+LF+++G+ KG+LL+GP G GKTLLA A +
Sbjct: 726 TMEDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISN 785
Query: 768 TECTFIRVSGSELVQKFIGEGXXMVRELFVNGQRTC 875
+ + + V G EL+ K+IG VR +F R+C
Sbjct: 786 SNFSVVNVKGPELLSKYIGASEENVRLVFEKA-RSC 820
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 82.2 bits (194), Expect = 5e-16
Identities = 41/96 (42%), Positives = 62/96 (64%)
Frame = +3
Query: 588 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 767
T E VGG+ +Q K +++VI P K+P+LF+++G+ KG+LL+GP G GKTLLA A +
Sbjct: 726 TMEDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISN 785
Query: 768 TECTFIRVSGSELVQKFIGEGXXMVRELFVNGQRTC 875
+ + + V G EL+ K+IG VR +F R+C
Sbjct: 786 SNFSVVNVKGPELLSKYIGASEENVRLVFEKA-RSC 820
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 80.6 bits (190), Expect = 1e-15
Identities = 40/94 (42%), Positives = 61/94 (64%)
Frame = +3
Query: 594 EMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTE 773
E VGG+ +Q K +++VI P K+P+LF+++G+ KG+LL+GP G GKTLLA A ++
Sbjct: 2 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISNSN 61
Query: 774 CTFIRVSGSELVQKFIGEGXXMVRELFVNGQRTC 875
+ + V G EL+ K+IG VR +F R+C
Sbjct: 62 FSVVNVKGPELLSKYIGASEENVRLVFEKA-RSC 94
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/82 (46%), Positives = 54/82 (65%)
Frame = +3
Query: 609 LDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIR 788
+D+ E++E+++ +K PE + LG PKGVLL GPPGTGKTLLARA+A + F
Sbjct: 206 MDEAKLEVEEIVDY-LKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFH 264
Query: 789 VSGSELVQKFIGEGXXMVRELF 854
+GSE + +G+G VR+LF
Sbjct: 265 TAGSEFDEVLVGQGARRVRDLF 286
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 79.4 bits (187), Expect = 3e-15
Identities = 42/104 (40%), Positives = 68/104 (65%), Gaps = 2/104 (1%)
Frame = +3
Query: 549 LXSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPP 725
L +++EK P+ + + GL+ + +KE + LP+K P+LF G +P +G+LL+GPP
Sbjct: 104 LSGAIVMEK-PNVKWTDIAGLEGAKEALKEAVILPIKFPQLFT--GNRKPWQGILLFGPP 160
Query: 726 GTGKTLLARAVAHHT-ECTFIRVSGSELVQKFIGEGXXMVRELF 854
GTGK+ +A+AVA E TF +S S+L+ K++GE +V+ LF
Sbjct: 161 GTGKSYIAKAVATEAGESTFFSISSSDLMSKWLGESEKLVKNLF 204
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 78.2 bits (184), Expect = 7e-15
Identities = 39/85 (45%), Positives = 53/85 (62%)
Frame = +3
Query: 600 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT 779
V G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A
Sbjct: 295 VAGCEEAKIEIMEFVNF-LKNPQQYKDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVP 353
Query: 780 FIRVSGSELVQKFIGEGXXMVRELF 854
FI VSGSE ++ F+G G VR++F
Sbjct: 354 FITVSGSEFLEMFVGVGPARVRDMF 378
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 75.4 bits (177), Expect = 5e-14
Identities = 35/93 (37%), Positives = 56/93 (60%)
Frame = +3
Query: 591 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 770
++ +GG ++ + E+K+ I LP++ + ++ P+G+LLYGPPG GKTLLA+AVA
Sbjct: 79 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAA 138
Query: 771 ECTFIRVSGSELVQKFIGEGXXMVRELFVNGQR 869
C FI + S L K+ GE + +F Q+
Sbjct: 139 GCRFINLQVSNLTDKWYGESQKLAAAVFSVAQK 171
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 75.4 bits (177), Expect = 5e-14
Identities = 35/93 (37%), Positives = 56/93 (60%)
Frame = +3
Query: 591 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 770
++ +GG ++ + E+K+ I LP++ + ++ P+G+LLYGPPG GKTLLA+AVA
Sbjct: 82 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAA 141
Query: 771 ECTFIRVSGSELVQKFIGEGXXMVRELFVNGQR 869
C FI + S L K+ GE + +F Q+
Sbjct: 142 GCRFINLQVSNLTDKWYGESQKLAAAVFSVAQK 174
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 73.7 bits (173), Expect = 2e-13
Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 4/101 (3%)
Frame = +3
Query: 564 MVEKVPDST---YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGT 731
++++V D+T + V G ++E + LP +P LF G+ QP KG+LL+GPPG
Sbjct: 165 LLDEVLDNTGVRMDDVAGCHSAKAALEEAVILPALNPNLFK--GLRQPVKGILLFGPPGN 222
Query: 732 GKTLLARAVAHHTECTFIRVSGSELVQKFIGEGXXMVRELF 854
GKTLLA+AVA ++ F +S S L K++G+ +R LF
Sbjct: 223 GKTLLAKAVAGESKQMFFNISASSLTSKWVGDSEKTIRGLF 263
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 69.7 bits (163), Expect = 3e-12
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Frame = +3
Query: 591 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 770
++ V G + EI+E ++ +K+P F LG P+G LL GPPG GKTLLA+A+A +
Sbjct: 284 FKDVAGCSEAKVEIREFVDY-LKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAES 342
Query: 771 ECTFIRVSGSELVQKFIGEGXXMVRELF--VNGQRTCXFY 884
FI ++GSE V+ G G +R LF + C Y
Sbjct: 343 TVPFISMNGSEFVEVIGGLGASRIRGLFKEARSRAPCIIY 382
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 69.7 bits (163), Expect = 3e-12
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Frame = +3
Query: 591 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 770
++ V G + EI+E ++ +K+P F LG P+G LL GPPG GKTLLA+A+A +
Sbjct: 284 FKDVAGCSEAKVEIREFVDY-LKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAES 342
Query: 771 ECTFIRVSGSELVQKFIGEGXXMVRELF--VNGQRTCXFY 884
FI ++GSE V+ G G +R LF + C Y
Sbjct: 343 TVPFISMNGSEFVEVIGGLGASRIRGLFKEARSRAPCIIY 382
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 68.1 bits (159), Expect = 8e-12
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Frame = +3
Query: 579 PDSTYEM--VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 749
PD ++ +GGLD + I + V PE + LG+ +G+LL+GPPGTGKTL+A
Sbjct: 288 PDWDFQQMGIGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMA 347
Query: 750 RAVAHHTECTFIR-VSGSELVQKFIGEGXXMVRELFVNGQ 866
R + + V+G +++ K++GE VR+LF + +
Sbjct: 348 RQIGKMLNAREPKIVNGPQILDKYVGESESNVRKLFADAE 387
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 68.1 bits (159), Expect = 8e-12
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Frame = +3
Query: 579 PDSTYEM--VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 749
PD ++ +GGLD + I + V PE + LG+ +G+LL+GPPGTGKTL+A
Sbjct: 288 PDWDFQQMGIGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMA 347
Query: 750 RAVAHHTECTFIR-VSGSELVQKFIGEGXXMVRELFVNGQ 866
R + + V+G +++ K++GE VR+LF + +
Sbjct: 348 RQIGKMLNAREPKIVNGPQILDKYVGESESNVRKLFADAE 387
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 68.1 bits (159), Expect = 8e-12
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Frame = +3
Query: 579 PDSTYEM--VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 749
PD ++ +GGLD + I + V PE + LG+ +G+LL+GPPGTGKTL+A
Sbjct: 222 PDWDFQQMGIGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMA 281
Query: 750 RAVAHHTECTFIR-VSGSELVQKFIGEGXXMVRELFVNGQ 866
R + + V+G +++ K++GE VR+LF + +
Sbjct: 282 RQIGKMLNAREPKIVNGPQILDKYVGESESNVRKLFADAE 321
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 66.1 bits (154), Expect = 3e-11
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Frame = +3
Query: 594 EMVGGLD-KQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGTGKTLLARAVAHH 767
+++G D KQ+ + E + LP+ PE F G+ P K ++L GPPGTGKTL+ARA+A
Sbjct: 194 DIIGMHDVKQV--LHEAVTLPLLVPEFFQ--GLRSPWKAMVLAGPPGTGKTLIARAIASE 249
Query: 768 TECTFIRVSGSELVQKFIGEGXXMVRELF 854
+ TF VS ++L K+ G+ +VR LF
Sbjct: 250 SSSTFFTVSSTDLSSKWRGDSEKIVRLLF 278
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 66.1 bits (154), Expect = 3e-11
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Frame = +3
Query: 594 EMVGGLD-KQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGTGKTLLARAVAHH 767
+++G D KQ+ + E + LP+ PE F G+ P K ++L GPPGTGKTL+ARA+A
Sbjct: 194 DIIGMHDVKQV--LHEAVTLPLLVPEFFQ--GLRSPWKAMVLAGPPGTGKTLIARAIASE 249
Query: 768 TECTFIRVSGSELVQKFIGEGXXMVRELF 854
+ TF VS ++L K+ G+ +VR LF
Sbjct: 250 SSSTFFTVSSTDLSSKWRGDSEKIVRLLF 278
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 66.1 bits (154), Expect = 3e-11
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Frame = +3
Query: 594 EMVGGLD-KQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGTGKTLLARAVAHH 767
+++G D KQ+ + E + LP+ PE F G+ P K ++L GPPGTGKTL+ARA+A
Sbjct: 194 DIIGMHDVKQV--LHEAVTLPLLVPEFFQ--GLRSPWKAMVLAGPPGTGKTLIARAIASE 249
Query: 768 TECTFIRVSGSELVQKFIGEGXXMVRELF 854
+ TF VS ++L K+ G+ +VR LF
Sbjct: 250 SSSTFFTVSSTDLSSKWRGDSEKIVRLLF 278
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 65.7 bits (153), Expect = 4e-11
Identities = 34/94 (36%), Positives = 57/94 (60%)
Frame = +3
Query: 573 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 752
K+P+ +E VGGL++ + + E I LF + + + G++LYG PG GKTL+A+
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESIRT-----NLFGSRALKR-SGIILYGSPGCGKTLIAK 511
Query: 753 AVAHHTECTFIRVSGSELVQKFIGEGXXMVRELF 854
AVA + F+ V G EL+ K++G+ +R++F
Sbjct: 512 AVATEFKIAFLSVKGPELLNKYVGQSEENLRKVF 545
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 65.7 bits (153), Expect = 4e-11
Identities = 34/94 (36%), Positives = 57/94 (60%)
Frame = +3
Query: 573 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 752
K+P+ +E VGGL++ + + E I LF + + + G++LYG PG GKTL+A+
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESIRT-----NLFGSRALKR-SGIILYGSPGCGKTLIAK 511
Query: 753 AVAHHTECTFIRVSGSELVQKFIGEGXXMVRELF 854
AVA + F+ V G EL+ K++G+ +R++F
Sbjct: 512 AVATEFKIAFLSVKGPELLNKYVGQSEENLRKVF 545
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 65.7 bits (153), Expect = 4e-11
Identities = 34/94 (36%), Positives = 57/94 (60%)
Frame = +3
Query: 573 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 752
K+P+ +E VGGL++ + + E I LF + + + G++LYG PG GKTL+A+
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESIRT-----NLFGSRALKR-SGIILYGSPGCGKTLIAK 511
Query: 753 AVAHHTECTFIRVSGSELVQKFIGEGXXMVRELF 854
AVA + F+ V G EL+ K++G+ +R++F
Sbjct: 512 AVATEFKIAFLSVKGPELLNKYVGQSEENLRKVF 545
>Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical
protein F54B3.3 protein.
Length = 595
Score = 41.9 bits (94), Expect = 6e-04
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = +3
Query: 699 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL 806
+ V+ YGPPGTGKTL A+++A H+ + ++G ++
Sbjct: 343 RNVMFYGPPGTGKTLFAKSLAQHSGLDYAVLTGGDI 378
>Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical
protein F10B5.5 protein.
Length = 424
Score = 36.3 bits (80), Expect = 0.030
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 9/59 (15%)
Frame = +3
Query: 705 VLLYGPPGTGKTLLARAVAHH---------TECTFIRVSGSELVQKFIGEGXXMVRELF 854
+LL GPPGTGKT L + +A H ++ + ++ L K+ E +V+++F
Sbjct: 175 ILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSHSLFSKWFSESGKLVQKMF 233
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 35.9 bits (79), Expect = 0.039
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 684 GIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 803
G+ +G L YGPPGTGK+ A+A H + +S SE
Sbjct: 193 GVPYRRGYLFYGPPGTGKSSFISALASHFGYSVCLLSLSE 232
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 35.9 bits (79), Expect = 0.039
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 684 GIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 803
G+ +G L YGPPGTGK+ A+A H + +S SE
Sbjct: 239 GVPYRRGYLFYGPPGTGKSSFISALASHFGYSVCLLSLSE 278
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 31.9 bits (69), Expect = 0.64
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 654 VKHPELFDALGIAQPKGVLLYGPPGTGKTL-LARAVAHHTECTFIRVSGS 800
V+H E+ A +A+ K ++L GPPG+GKT+ L A+ E + V+ S
Sbjct: 2517 VRH-EMLLAAWLAEHKPLVLCGPPGSGKTMTLLAALRSQQEMEVVNVNFS 2565
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 31.9 bits (69), Expect = 0.64
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 654 VKHPELFDALGIAQPKGVLLYGPPGTGKTL-LARAVAHHTECTFIRVSGS 800
V+H E+ A +A+ K ++L GPPG+GKT+ L A+ E + V+ S
Sbjct: 2517 VRH-EMLLAAWLAEHKPLVLCGPPGSGKTMTLLAALRSQQEMEVVNVNFS 2565
>AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical
protein Y75B8A.4 protein.
Length = 773
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 699 KGVLLY--GPPGTGKTLLARAVAHHTECTFIRVS 794
KG++L GPPG GKT +A+A+A F RVS
Sbjct: 328 KGMILCFTGPPGIGKTSIAKAIAESMGRKFQRVS 361
>AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans
nonsense-mediated mRNA decay trans-acting factor
protein.
Length = 1069
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 708 LLYGPPGTGKTLLARAVAHH 767
L+ GPPGTGKT+++ + +H
Sbjct: 464 LIQGPPGTGKTVVSATIVYH 483
>AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 2 protein.
Length = 1069
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 708 LLYGPPGTGKTLLARAVAHH 767
L+ GPPGTGKT+++ + +H
Sbjct: 464 LIQGPPGTGKTVVSATIVYH 483
>Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical
protein K08F4.1 protein.
Length = 850
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 699 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 803
K +LL GP G GK+ LAR VA + I V+ S+
Sbjct: 331 KMLLLSGPAGLGKSTLARIVARQAGYSTIDVNASD 365
>Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical
protein E02H1.6 protein.
Length = 182
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 705 VLLYGPPGTGKTLLARAVAHHTECTFIRVS 794
+L+ G PGTGK+ L + VA FI VS
Sbjct: 12 ILVTGSPGTGKSTLGQQVAEKLGFVFIEVS 41
>L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical
protein F44B9.8 protein.
Length = 368
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 705 VLLYGPPGTGKTLLARAVA 761
+L YGPPGTGKT A A
Sbjct: 65 LLFYGPPGTGKTTTVLAAA 83
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein
C47E8.8 protein.
Length = 1675
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 847 SRTIXXPSPINFCTNSDPETRMKVHSVW*ATARANNVFPVP 725
SRTI P +F +NS+PE ++ + + + A++V P P
Sbjct: 1030 SRTIKVEEPTDFPSNSEPEAQIPLETRTLEPSEASSVQPEP 1070
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 847 SRTIXXPSPINFCTNSDPETRMKVHSVW*ATARANNVFPVP 725
SRTI P +F +NS+PE ++ + + + A++V P P
Sbjct: 1030 SRTIKVEEPTDFPSNSEPEAQIPLETRTLEPSEASSVQPEP 1070
>U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 4 protein.
Length = 334
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 705 VLLYGPPGTGKTLLARA 755
+L YGPPGTGKT A A
Sbjct: 51 LLFYGPPGTGKTSAALA 67
>AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical
protein C30F12.2 protein.
Length = 445
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 675 DALGIAQPKGVLLYGPPGTGKTLL 746
D I P+G+ LYG G GKT+L
Sbjct: 83 DTPKIISPRGIYLYGSVGCGKTML 106
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 699 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVS 794
K + +GPPG GKT +A+++A + R S
Sbjct: 506 KILCFHGPPGVGKTSIAKSIATALNREYFRFS 537
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 699 KGVLLYGPPGTGKTLLARAVA 761
+ VL+ GPP TGKT +A A++
Sbjct: 83 RAVLIAGPPATGKTAIALAMS 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,138,630
Number of Sequences: 27780
Number of extensions: 318748
Number of successful extensions: 1012
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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