Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_J03
         (897 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.8  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   6.6  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    22   8.7  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    22   8.7  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   8.7  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   8.7  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 557  AHDGRESAGLYLRNGRWSRQTNQGDQRG 640
            AH    S  +  +NGR+SR  +QG   G
Sbjct: 1771 AHSRSGSQSMPRQNGRYSRVPSQGGGSG 1798


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 771 ECTFIRVSGSEL 806
           ECTFI V+G E+
Sbjct: 120 ECTFISVNGKEV 131


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 600 VGGLDKQIKEIKEVIELPVKHPELFD 677
           VGG    I +I  +I+LP   P + D
Sbjct: 10  VGGFCHSIIQIPVIIQLPFCGPNVID 35


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 762 ERQHELIMSFQCPEAH 715
           ER H     F+CPE H
Sbjct: 1   ERTHTGEKPFECPECH 16


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -1

Query: 468 SLISTFLSKSTTNLPSG*TFXEDLLFIHRFNHFS 367
           ++++TF +KS  +L  G  F      + RF H +
Sbjct: 446 NILNTFWTKSDVDLSRGLDFTPRGAVLARFTHLN 479


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 793 LDQNWYKNLL 822
           +D NWYKN L
Sbjct: 22  VDANWYKNAL 31


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,444
Number of Sequences: 438
Number of extensions: 4216
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)