Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_J02
(887 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O02394 Cluster: Dribble protein; n=4; Fungi/Metazoa gro... 233 6e-60
UniRef50_Q13601 Cluster: KRR1 small subunit processome component... 211 2e-53
UniRef50_A0FIK6 Cluster: HRB2 variant B; n=15; Coelomata|Rep: HR... 208 2e-52
UniRef50_O16311 Cluster: Putative uncharacterized protein; n=2; ... 192 1e-47
UniRef50_Q54UU6 Cluster: Putative uncharacterized protein; n=1; ... 173 7e-42
UniRef50_A0E352 Cluster: Chromosome undetermined scaffold_76, wh... 168 2e-40
UniRef50_P25586 Cluster: Ribosomal RNA assembly protein KRR1; n=... 167 2e-40
UniRef50_Q86E68 Cluster: Clone ZZD933 mRNA sequence; n=1; Schist... 164 3e-39
UniRef50_Q5KHS1 Cluster: RRNA processing-related protein, putati... 161 3e-38
UniRef50_Q587A1 Cluster: Ribosomal RNA assembly protein, putativ... 146 5e-34
UniRef50_Q5N8D1 Cluster: Rev protein (42.9 kD)-like; n=9; Magnol... 129 2e-32
UniRef50_Q7QYA4 Cluster: GLP_387_52551_53537; n=2; Giardia intes... 139 8e-32
UniRef50_A2EWA3 Cluster: Ribosomal RNA assembly protein mis3, pu... 125 2e-27
UniRef50_Q9AW78 Cluster: Rev interacting protein Rip-1-like prot... 114 3e-24
UniRef50_Q8SVW2 Cluster: Putative uncharacterized protein ECU04_... 106 9e-22
UniRef50_Q57885 Cluster: KH domain-containing protein MJ0443; n=... 45 0.002
UniRef50_Q3LWA8 Cluster: Putative uncharacterized protein; n=1; ... 43 0.009
UniRef50_Q2NEN8 Cluster: Predicted RNA-binding protein; n=3; Met... 43 0.012
UniRef50_Q9V136 Cluster: Predicted RNA-binding protein; n=4; The... 41 0.037
UniRef50_Q8TH62 Cluster: Predicted RNA-binding protein containin... 39 0.20
UniRef50_A3DNJ3 Cluster: KH, type 1, domain protein; n=3; Desulf... 36 1.0
UniRef50_A3H623 Cluster: KH, type 1; n=1; Caldivirga maquilingen... 34 4.2
UniRef50_Q1FP10 Cluster: Binding-protein-dependent transport sys... 34 5.6
UniRef50_Q7RQL2 Cluster: Putative uncharacterized protein PY0108... 34 5.6
UniRef50_A7D0D1 Cluster: KH, type 1, domain protein; n=6; Euryar... 34 5.6
UniRef50_O83582 Cluster: Uncharacterized protein TP_0572; n=1; T... 34 5.6
UniRef50_A2F616 Cluster: Putative uncharacterized protein; n=7; ... 33 7.4
UniRef50_UPI000065DAE4 Cluster: Homolog of Homo sapiens "PREDICT... 33 9.7
UniRef50_Q6L2G6 Cluster: Putative RNA-binding protein; n=1; Picr... 33 9.7
>UniRef50_O02394 Cluster: Dribble protein; n=4; Fungi/Metazoa
group|Rep: Dribble protein - Drosophila melanogaster
(Fruit fly)
Length = 327
Score = 233 bits (569), Expect = 6e-60
Identities = 103/143 (72%), Positives = 122/143 (85%)
Frame = +1
Query: 154 TNSVDNAWAMKXPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILSEHHIVA 333
T VDNAW+MK P F +DNPHG++EES FATLFPKYRE+YLKE WPLV++ L+EHH+ A
Sbjct: 13 TEPVDNAWSMKIPAFRQEDNPHGMVEESSFATLFPKYRERYLKEVWPLVEQCLAEHHLKA 72
Query: 334 ELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDIIKINSF 513
ELDL+EGS+ VKT+RKTWDPYIIIKARD +KL++RSVPFEQA RVL D+IGCDIIKI +
Sbjct: 73 ELDLMEGSMVVKTSRKTWDPYIIIKARDMIKLMARSVPFEQAKRVLQDDIGCDIIKIGNL 132
Query: 514 VRKKETFLKRRQRLIGPQGCYIK 582
V KKE F+KRRQRLIGP G +K
Sbjct: 133 VHKKEKFVKRRQRLIGPNGATLK 155
Score = 134 bits (325), Expect = 2e-30
Identities = 65/108 (60%), Positives = 77/108 (71%)
Frame = +2
Query: 494 LLKLIHLFAKKKPF*XXXXXXXXXXXVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVR 673
++K+ +L KK+ F TLKSIELLT+CYVLVQGNTVSA+GPYKGL QVR
Sbjct: 126 IIKIGNLVHKKEKFVKRRQRLIGPNGATLKSIELLTDCYVLVQGNTVSALGPYKGLQQVR 185
Query: 674 RIVEDTMKNIHPMYNIKSLMIKRELXKDPXLKNESWDXFLPTFXXXNV 817
IV +TM N+HP+YNIK+LMIKREL KDP L NE W FLP F N+
Sbjct: 186 DIVLETMNNVHPIYNIKALMIKRELMKDPRLANEDWSRFLPKFKNKNI 233
>UniRef50_Q13601 Cluster: KRR1 small subunit processome component
homolog; n=44; Eukaryota|Rep: KRR1 small subunit
processome component homolog - Homo sapiens (Human)
Length = 381
Score = 211 bits (515), Expect = 2e-53
Identities = 99/149 (66%), Positives = 118/149 (79%)
Frame = +1
Query: 136 NMEVEXTNSVDNAWAMKXPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILS 315
N + +V + W K P F+ +DNP GLLEES FATLFPKYRE YLKECWPLVQK L+
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALN 84
Query: 316 EHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDI 495
EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KLL+RSV FEQA R+L D++ CDI
Sbjct: 85 EHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDI 144
Query: 496 IKINSFVRKKETFLKRRQRLIGPQGCYIK 582
IKI S VR KE F+KRRQRLIGP+G +K
Sbjct: 145 IKIGSLVRNKERFVKRRQRLIGPKGSTLK 173
Score = 127 bits (306), Expect = 4e-28
Identities = 59/108 (54%), Positives = 77/108 (71%)
Frame = +2
Query: 494 LLKLIHLFAKKKPF*XXXXXXXXXXXVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVR 673
++K+ L K+ F TLK++ELLT CY++VQGNTVSA+GP+ GL +VR
Sbjct: 144 IIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVR 203
Query: 674 RIVEDTMKNIHPMYNIKSLMIKRELXKDPXLKNESWDXFLPTFXXXNV 817
++V DTMKNIHP+YNIKSLMIKREL KD L+++SW+ FLP F NV
Sbjct: 204 KVVLDTMKNIHPIYNIKSLMIKRELAKDSELRSQSWERFLPQFKHKNV 251
>UniRef50_A0FIK6 Cluster: HRB2 variant B; n=15; Coelomata|Rep: HRB2
variant B - Homo sapiens (Human)
Length = 324
Score = 208 bits (507), Expect = 2e-52
Identities = 97/149 (65%), Positives = 117/149 (78%)
Frame = +1
Query: 136 NMEVEXTNSVDNAWAMKXPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILS 315
N + +V + W K P F+ +DNP GLLEES FATLFPKYRE YLKECWPLVQK L+
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALN 84
Query: 316 EHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDI 495
EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KLL+RSV FEQA R+L D++ CDI
Sbjct: 85 EHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDI 144
Query: 496 IKINSFVRKKETFLKRRQRLIGPQGCYIK 582
IKI S VR KE F+KR QRL+GP+G +K
Sbjct: 145 IKIGSLVRNKERFVKRGQRLVGPKGSTLK 173
Score = 87.8 bits (208), Expect = 3e-16
Identities = 40/77 (51%), Positives = 54/77 (70%)
Frame = +2
Query: 494 LLKLIHLFAKKKPF*XXXXXXXXXXXVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVR 673
++K+ L K+ F TLK++ELLT CY++VQGNTVSA+GP+ GL +VR
Sbjct: 144 IIKIGSLVRNKERFVKRGQRLVGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVR 203
Query: 674 RIVEDTMKNIHPMYNIK 724
++V DTMKNIHP+YNIK
Sbjct: 204 KVVLDTMKNIHPIYNIK 220
>UniRef50_O16311 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 370
Score = 192 bits (467), Expect = 1e-47
Identities = 85/129 (65%), Positives = 110/129 (85%)
Frame = +1
Query: 196 FTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILSEHHIVAELDLIEGSLTVKTT 375
F+ +DNP+GLL+ES F++LFPKYRE+Y+KE WPL++K L EH + A+LDL+EG++ V+TT
Sbjct: 50 FSKEDNPNGLLQESSFSSLFPKYREKYIKESWPLIEKALGEHFLKADLDLLEGTMCVRTT 109
Query: 376 RKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLKRRQRL 555
RKTWDPYII+KAR+ +KLLSRSVP+EQA RVL+DEI C+IIKI+S VR KE F+KRR RL
Sbjct: 110 RKTWDPYIIMKAREVIKLLSRSVPYEQAIRVLEDEIYCEIIKISSMVRNKERFVKRRARL 169
Query: 556 IGPQGCYIK 582
IG G +K
Sbjct: 170 IGNDGATLK 178
Score = 110 bits (265), Expect = 4e-23
Identities = 51/103 (49%), Positives = 69/103 (66%)
Frame = +2
Query: 494 LLKLIHLFAKKKPF*XXXXXXXXXXXVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVR 673
++K+ + K+ F TLK++ELLT+CYV VQG TV AVGP GL Q+
Sbjct: 149 IIKISSMVRNKERFVKRRARLIGNDGATLKALELLTQCYVCVQGGTVCAVGPLAGLKQIN 208
Query: 674 RIVEDTMKNIHPMYNIKSLMIKRELXKDPXLKNESWDXFLPTF 802
+IV D MKNIHP+YNIK++MIKREL K+ LK+ +WD +LP +
Sbjct: 209 QIVTDCMKNIHPIYNIKTMMIKRELSKNDELKDANWDAYLPNY 251
>UniRef50_Q54UU6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 374
Score = 173 bits (420), Expect = 7e-42
Identities = 86/152 (56%), Positives = 106/152 (69%), Gaps = 1/152 (0%)
Frame = +1
Query: 130 KTNMEVEXTNSVDNAWAMKXPKFTPDD-NPHGLLEESKFATLFPKYREQYLKECWPLVQK 306
K E+E +D W K + DD L ++S FATLFPKYRE+YL+E W LV+
Sbjct: 25 KEREELEIPKGID-PW--KPLELKRDDVGKRVLYDDSSFATLFPKYREKYLQEIWKLVEN 81
Query: 307 ILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIG 486
+L EH I +LDLIEGS+TV TT+K WDP I+KARD +KLLSRSVPFE A +VL+D+
Sbjct: 82 VLHEHGIECKLDLIEGSMTVTTTKKCWDPVAILKARDLIKLLSRSVPFEHAQKVLNDDYN 141
Query: 487 CDIIKINSFVRKKETFLKRRQRLIGPQGCYIK 582
CDIIKI FVR KE F+KRRQRL+GP G +K
Sbjct: 142 CDIIKIGGFVRNKERFVKRRQRLVGPDGSTLK 173
Score = 130 bits (313), Expect = 6e-29
Identities = 58/80 (72%), Positives = 69/80 (86%)
Frame = +2
Query: 575 TLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNIHPMYNIKSLMIKRELXK 754
TLK+IELLT+CYVLVQGNTVS++GP+ GLVQVR+IVED +KNIHP+YNIK LMIKREL K
Sbjct: 171 TLKAIELLTKCYVLVQGNTVSSIGPWNGLVQVRKIVEDCLKNIHPIYNIKELMIKRELEK 230
Query: 755 DPXLKNESWDXFLPTFXXXN 814
D LKNE+W+ +LP F N
Sbjct: 231 DETLKNENWERYLPQFKKTN 250
>UniRef50_A0E352 Cluster: Chromosome undetermined scaffold_76, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_76,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 348
Score = 168 bits (408), Expect = 2e-40
Identities = 79/133 (59%), Positives = 101/133 (75%)
Frame = +1
Query: 184 KXPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILSEHHIVAELDLIEGSLT 363
K P+ P + LL ES FATLFPKYRE+Y++E + +V+K + +H I AEL+L+EGSLT
Sbjct: 30 KIPEIQPGEMNGSLLAESSFATLFPKYREKYIQEVFGMVKKSMKDHGIRAELNLMEGSLT 89
Query: 364 VKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLKR 543
VKTT KTWDP+ I+KARD +KLL+RSVP +Q R+L+D CDIIKI S+ R KE F+KR
Sbjct: 90 VKTTNKTWDPWAIMKARDIIKLLARSVPVQQCLRLLEDGTFCDIIKIRSYTRNKEKFVKR 149
Query: 544 RQRLIGPQGCYIK 582
RQRLIGP G +K
Sbjct: 150 RQRLIGPNGATLK 162
Score = 113 bits (272), Expect = 6e-24
Identities = 48/80 (60%), Positives = 65/80 (81%)
Frame = +2
Query: 575 TLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNIHPMYNIKSLMIKRELXK 754
TLK++ELLT+CY++VQG+TVS +G +K L VR++V DTM+N+HP+Y+IK LMIKREL K
Sbjct: 160 TLKALELLTDCYIMVQGSTVSVIGNWKNLKTVRKVVVDTMQNVHPIYSIKELMIKRELSK 219
Query: 755 DPXLKNESWDXFLPTFXXXN 814
D ++NE+WD FLP F N
Sbjct: 220 DENMQNENWDRFLPHFKKQN 239
>UniRef50_P25586 Cluster: Ribosomal RNA assembly protein KRR1; n=35;
Eukaryota|Rep: Ribosomal RNA assembly protein KRR1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 316
Score = 167 bits (407), Expect = 2e-40
Identities = 82/145 (56%), Positives = 104/145 (71%), Gaps = 2/145 (1%)
Frame = +1
Query: 154 TNSVDNAWAMKXPKFTPDDNPHG--LLEESKFATLFPKYREQYLKECWPLVQKILSEHHI 327
T+ +D W K +F +DN G EES F TLFPKYRE YLK W V + L +H+I
Sbjct: 13 TDDIDK-W--KIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRALDKHNI 69
Query: 328 VAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDIIKIN 507
LDL+EGS+TVKTTRKT+DP II+KARD +KLL+RSVPF QA ++L D++ CD+IKI
Sbjct: 70 ACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMACDVIKIG 129
Query: 508 SFVRKKETFLKRRQRLIGPQGCYIK 582
+FV KE F+KRRQRL+GP G +K
Sbjct: 130 NFVTNKERFVKRRQRLVGPNGNTLK 154
Score = 127 bits (306), Expect = 4e-28
Identities = 57/81 (70%), Positives = 67/81 (82%)
Frame = +2
Query: 575 TLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNIHPMYNIKSLMIKRELXK 754
TLK++ELLT+CY+LVQGNTVSA+GP+KGL +VRR+VED MKNIHP+Y+IK LMIKREL K
Sbjct: 152 TLKALELLTKCYILVQGNTVSAMGPFKGLKEVRRVVEDCMKNIHPIYHIKELMIKRELAK 211
Query: 755 DPXLKNESWDXFLPTFXXXNV 817
P L NE W FLP F NV
Sbjct: 212 RPELANEDWSRFLPMFKKRNV 232
>UniRef50_Q86E68 Cluster: Clone ZZD933 mRNA sequence; n=1;
Schistosoma japonicum|Rep: Clone ZZD933 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 343
Score = 164 bits (398), Expect = 3e-39
Identities = 80/152 (52%), Positives = 107/152 (70%), Gaps = 1/152 (0%)
Frame = +1
Query: 130 KTNMEVEXTNSVDNAWAMKXPKFTPDDNPHG-LLEESKFATLFPKYREQYLKECWPLVQK 306
K N E+ + V+ K PKF P+DNPHG L S + TLFPKYRE+YL E WP +++
Sbjct: 28 KKNDEINESQYVEVPKDWKEPKFNPEDNPHGRLFASSSYLTLFPKYREKYLSEIWPALKR 87
Query: 307 ILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIG 486
I+ EHHI E++L E ++ V+TT +T+DP+II+KARD ++LL+RSVP EQA RVLDDE
Sbjct: 88 IMMEHHIRVEINLAESTMEVRTTPRTFDPFIILKARDVIRLLARSVPLEQAVRVLDDETF 147
Query: 487 CDIIKINSFVRKKETFLKRRQRLIGPQGCYIK 582
DII+IN + +E F+KRR RLIG G +K
Sbjct: 148 ADIIEIN--MTNRERFVKRRNRLIGHDGETLK 177
Score = 87.8 bits (208), Expect = 3e-16
Identities = 40/75 (53%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Frame = +2
Query: 575 TLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTM-KNIHPMYNIKSLMIKRELX 751
TLK++EL T CY++VQG TVS VG Y L +VR+IV+ + +N+HP Y+IK L+I ++L
Sbjct: 175 TLKALELSTNCYIVVQGKTVSVVGRYNDLKEVRKIVQGCIYENVHPAYSIKRLLIIKKLS 234
Query: 752 KDPXLKNESWDXFLP 796
DP +N SWD FLP
Sbjct: 235 MDPTKQNMSWDRFLP 249
>UniRef50_Q5KHS1 Cluster: RRNA processing-related protein, putative;
n=1; Filobasidiella neoformans|Rep: RRNA
processing-related protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 402
Score = 161 bits (390), Expect = 3e-38
Identities = 75/143 (52%), Positives = 96/143 (67%)
Frame = +1
Query: 154 TNSVDNAWAMKXPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILSEHHIVA 333
T+ +D+ WAM+ K + LEES FA LFPKYRE YL+ W + L + +
Sbjct: 35 TDDIDH-WAMEEFKAPNPETHKPFLEESSFALLFPKYREPYLRSVWSSITSALEAYGLAC 93
Query: 334 ELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDIIKINSF 513
ELDL++G +TVKTTRKTWDPYII K RD +KLL+R V QA ++L+D I CDIIKI
Sbjct: 94 ELDLVQGKMTVKTTRKTWDPYIIFKGRDLLKLLARGVNAPQAIKILEDGIACDIIKIGGI 153
Query: 514 VRKKETFLKRRQRLIGPQGCYIK 582
VR KE F+KRRQR++GP G +K
Sbjct: 154 VRNKERFVKRRQRIVGPNGSTLK 176
Score = 123 bits (296), Expect = 7e-27
Identities = 56/76 (73%), Positives = 63/76 (82%)
Frame = +2
Query: 575 TLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNIHPMYNIKSLMIKRELXK 754
TLK+IELLTECYVLVQGNTVS +G YKGL +VRRI+ D M NIHP+Y IK LMI+REL K
Sbjct: 174 TLKAIELLTECYVLVQGNTVSVMGSYKGLKEVRRIILDCMNNIHPIYRIKELMIRRELAK 233
Query: 755 DPXLKNESWDXFLPTF 802
DP L NE+WD FLP F
Sbjct: 234 DPKLANENWDRFLPKF 249
>UniRef50_Q587A1 Cluster: Ribosomal RNA assembly protein, putative;
n=6; Trypanosomatidae|Rep: Ribosomal RNA assembly
protein, putative - Trypanosoma brucei
Length = 325
Score = 146 bits (355), Expect = 5e-34
Identities = 66/133 (49%), Positives = 91/133 (68%), Gaps = 2/133 (1%)
Frame = +1
Query: 190 PKFTPDDNPHGL--LEESKFATLFPKYREQYLKECWPLVQKILSEHHIVAELDLIEGSLT 363
P+ T DD P G + E+ FAT FP Y E Y++ WP V+ +L +H + +LDL+EGS+T
Sbjct: 50 PELTQDDVPGGACCVAETTFATQFPSYLESYIRSIWPAVETVLGQHQLTGKLDLMEGSMT 109
Query: 364 VKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLKR 543
V TTR+TWDPY I+KARDF++LL+R+VP QA ++ EI CDII I+ + F+KR
Sbjct: 110 VATTRRTWDPYAIVKARDFIRLLARNVPLAQAQKIFQTEITCDIIPISLKGKSTRRFIKR 169
Query: 544 RQRLIGPQGCYIK 582
R RLIGP+ +K
Sbjct: 170 RDRLIGPKAQTLK 182
Score = 104 bits (249), Expect = 3e-21
Identities = 45/76 (59%), Positives = 58/76 (76%)
Frame = +2
Query: 575 TLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNIHPMYNIKSLMIKRELXK 754
TLK++E+LT CYVLVQG TV+ +GP KG QVR+IV+D M NIHP+Y +K L+IKREL K
Sbjct: 180 TLKALEILTGCYVLVQGKTVAVMGPVKGCQQVRKIVDDCMNNIHPIYGLKQLLIKRELAK 239
Query: 755 DPXLKNESWDXFLPTF 802
LK+E W F+P +
Sbjct: 240 REDLKHEDWSRFIPVY 255
>UniRef50_Q5N8D1 Cluster: Rev protein (42.9 kD)-like; n=9;
Magnoliophyta|Rep: Rev protein (42.9 kD)-like - Oryza
sativa subsp. japonica (Rice)
Length = 421
Score = 129 bits (311), Expect(2) = 2e-32
Identities = 59/99 (59%), Positives = 77/99 (77%)
Frame = +1
Query: 268 EQYLKECWPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVP 447
++YL+E WP+V+ L E + EL+L+EGS+TV TTRKT DPYIIIKA + +KLLSRSVP
Sbjct: 97 KKYLQEAWPIVKGALKEFGVACELNLVEGSMTVSTTRKTKDPYIIIKANELIKLLSRSVP 156
Query: 448 FEQASRVLDDEIGCDIIKINSFVRKKETFLKRRQRLIGP 564
QA ++L+DE+ C IIKI S +R KE F+KRR RL+GP
Sbjct: 157 APQAIKILNDEMSCAIIKIGSIIRNKERFVKRRGRLLGP 195
Score = 113 bits (272), Expect = 6e-24
Identities = 55/114 (48%), Positives = 76/114 (66%), Gaps = 1/114 (0%)
Frame = +2
Query: 479 KLDATLLKLIHLFAKKKPF*XXXXXXXXXXXVTLKSIELLTECYVLVQGNTVSAVGPYKG 658
++ ++K+ + K+ F TLK+IE+LT CY+LVQGNT +A+G +KG
Sbjct: 167 EMSCAIIKIGSIIRNKERFVKRRGRLLGPNLSTLKAIEILTGCYILVQGNTAAAMGYWKG 226
Query: 659 LVQVRRIVEDTMKNI-HPMYNIKSLMIKRELXKDPXLKNESWDXFLPTFXXXNV 817
L QV R+VED +KN+ HP+Y+IK L+IKREL K+P L +ESWD FLP F NV
Sbjct: 227 LKQVVRVVEDCIKNVKHPVYHIKELLIKRELVKNPALAHESWDKFLPKFKKKNV 280
Score = 33.5 bits (73), Expect(2) = 2e-32
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 184 KXPKFTPDDNPHGLLEESKFATLFPKYR 267
K +F P N G+LE + F+TLFP+YR
Sbjct: 41 KIEEFDPSWNEGGMLEVTSFSTLFPQYR 68
>UniRef50_Q7QYA4 Cluster: GLP_387_52551_53537; n=2; Giardia
intestinalis|Rep: GLP_387_52551_53537 - Giardia lamblia
ATCC 50803
Length = 328
Score = 139 bits (337), Expect = 8e-32
Identities = 67/149 (44%), Positives = 97/149 (65%), Gaps = 2/149 (1%)
Frame = +1
Query: 142 EVEXTNSVDNAWAMKXPKFTPDDNPHG-LLEESKFATLFPKYREQYLKECWP-LVQKILS 315
E + T D + P+F P+DN G LL+ S F+TLFP YRE Y+ W L + S
Sbjct: 21 ERDMTGRTDVPEGWREPEFRPEDNKSGALLDVSSFSTLFPMYREPYITSIWKDLANMLSS 80
Query: 316 EHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDI 495
++ I AELDL +G++TV+TT KTWDP I+ AR+ + +LSRS+ FEQA R ++E+ CDI
Sbjct: 81 KYGIAAELDLQKGTITVQTTDKTWDPAAILSARNMIWMLSRSMTFEQAKRCFENEVDCDI 140
Query: 496 IKINSFVRKKETFLKRRQRLIGPQGCYIK 582
I+I + +K++F+KRR R +GP +K
Sbjct: 141 IRIKNMASRKDSFIKRRARFVGPNAQTLK 169
Score = 95.1 bits (226), Expect = 2e-18
Identities = 48/117 (41%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
Frame = +2
Query: 467 C*MTKLDATLLKLIHLFAKKKPF*XXXXXXXXXXXVTLKSIELLTECYVLVQGNTVSAVG 646
C ++D ++++ ++ ++K F TLK+IELLT+ + VQGNTV+ +G
Sbjct: 131 CFENEVDCDIIRIKNMASRKDSFIKRRARFVGPNAQTLKAIELLTDTKIQVQGNTVAVMG 190
Query: 647 PYKGLVQVRRIVEDTM-KNIHPMYNIKSLMIKRELXKDPXLKNESWDXFLPTFXXXN 814
+G+ VR IV D + +NIHP+ +IK+LMIKREL K P + NE W F+PTF N
Sbjct: 191 ASRGVGLVRNIVTDCIERNIHPVQHIKTLMIKRELAKIPEMANEDWSRFIPTFKKKN 247
>UniRef50_A2EWA3 Cluster: Ribosomal RNA assembly protein mis3,
putative; n=1; Trichomonas vaginalis G3|Rep: Ribosomal
RNA assembly protein mis3, putative - Trichomonas
vaginalis G3
Length = 298
Score = 125 bits (301), Expect = 2e-27
Identities = 61/129 (47%), Positives = 83/129 (64%)
Frame = +1
Query: 196 FTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILSEHHIVAELDLIEGSLTVKTT 375
F D + LLEES F LFP YRE+YL + W +Q + + I E+D G++++KTT
Sbjct: 11 FQKGDMKYKLLEESSFKVLFPHYREKYLTDNWKKIQDKMDSYGINIEVDYKNGNISLKTT 70
Query: 376 RKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLKRRQRL 555
KTWDP I+ ARD +KL++RSVP EQA RV ++ +II I +R +E F KRRQRL
Sbjct: 71 DKTWDPVAILNARDAIKLVARSVPIEQAFRVFEEGTESNIIIIGKHIRNQERFNKRRQRL 130
Query: 556 IGPQGCYIK 582
+GP G +K
Sbjct: 131 LGPGGSTLK 139
Score = 100 bits (240), Expect = 4e-20
Identities = 41/74 (55%), Positives = 58/74 (78%)
Frame = +2
Query: 575 TLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNIHPMYNIKSLMIKRELXK 754
TLK++ELLT+CY+LVQG+TVS +G +G+ ++V D M NIHP+Y+IK LM+KR+L K
Sbjct: 137 TLKALELLTQCYILVQGHTVSIIGNIRGINDASKVVVDCMNNIHPVYHIKRLMVKRDLMK 196
Query: 755 DPXLKNESWDXFLP 796
+P + NE WD +LP
Sbjct: 197 NPAMANEDWDRYLP 210
>UniRef50_Q9AW78 Cluster: Rev interacting protein Rip-1-like
protein; n=1; Guillardia theta|Rep: Rev interacting
protein Rip-1-like protein - Guillardia theta
(Cryptomonas phi)
Length = 262
Score = 114 bits (274), Expect = 3e-24
Identities = 53/124 (42%), Positives = 81/124 (65%)
Frame = +1
Query: 211 NPHGLLEESKFATLFPKYREQYLKECWPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWD 390
N L+E S F FPKY+E Y+KE W ++ +I+ IV +++ G + + + K +D
Sbjct: 20 NITNLIEVSCFKIKFPKYQENYIKENWHIINRIMKIRSIVVTINVNLGLVEIMNSLKGFD 79
Query: 391 PYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLKRRQRLIGPQG 570
PY IIKA+DF+ L+ R VP QAS++ D+I C+IIKI+ F +++FLK+R+RLIG G
Sbjct: 80 PYSIIKAKDFITLVCRGVPIFQASKIFKDDIFCEIIKISKFTSSRQSFLKKRKRLIGNNG 139
Query: 571 CYIK 582
+K
Sbjct: 140 VTVK 143
Score = 79.4 bits (187), Expect = 1e-13
Identities = 32/74 (43%), Positives = 53/74 (71%)
Frame = +2
Query: 572 VTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNIHPMYNIKSLMIKRELX 751
VT+K+IELLT+CY+L+QGNTV+ +G ++ L I+ +M N HP++ +K++ IK++L
Sbjct: 140 VTVKTIELLTKCYILIQGNTVACMGKFRDLKWCINIITKSMTNNHPIFYLKNIQIKKKLM 199
Query: 752 KDPXLKNESWDXFL 793
D K ++WD +L
Sbjct: 200 NDEFFKTKNWDKYL 213
>UniRef50_Q8SVW2 Cluster: Putative uncharacterized protein
ECU04_0510; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU04_0510 - Encephalitozoon
cuniculi
Length = 283
Score = 106 bits (254), Expect = 9e-22
Identities = 54/137 (39%), Positives = 79/137 (57%)
Frame = +1
Query: 193 KFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILSEHHIVAELDLIEGSLTVKT 372
KF+ D H E S A +FPKYRE+Y+++ + + L I +DL + + V T
Sbjct: 6 KFSDGDFKHEFAEMSSEAVMFPKYREKYIEQTQKYIVRALEAKKISCRIDLEKRVIDVMT 65
Query: 373 TRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFLKRRQR 552
R T DP+I IKA +F+KL+ R V E+A +VL+DE C++I I V + F KRR R
Sbjct: 66 NRSTRDPFIFIKAVNFVKLVGRGVGIEEAMKVLEDEYFCEVIDIKKMVSSDKVFEKRRDR 125
Query: 553 LIGPQGCYIKIH*IINR 603
L+GP+ +K I+ R
Sbjct: 126 LVGPKEMTLKAIQILTR 142
Score = 91.9 bits (218), Expect = 2e-17
Identities = 39/75 (52%), Positives = 54/75 (72%)
Frame = +2
Query: 572 VTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNIHPMYNIKSLMIKRELX 751
+TLK+I++LT CYVLV G TVS +G ++G+ + ++IV D M NIHPMY IK L+ KR++
Sbjct: 132 MTLKAIQILTRCYVLVHGKTVSIIGGFRGVEEAKKIVVDCMNNIHPMYQIKRLVEKRKME 191
Query: 752 KDPXLKNESWDXFLP 796
D +NE W FLP
Sbjct: 192 SDETKENEDWSRFLP 206
>UniRef50_Q57885 Cluster: KH domain-containing protein MJ0443; n=6;
Methanococcales|Rep: KH domain-containing protein MJ0443
- Methanococcus jannaschii
Length = 227
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/88 (28%), Positives = 46/88 (52%)
Frame = +1
Query: 307 ILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIG 486
I E + E+D +G++T+ T K DP + KARD ++ + R E A +++ DE
Sbjct: 40 IEKELGVKLEIDA-DGTVTIYGTDKQKDPLAVWKARDIVRAIGRGFNPEIALKLVSDEYV 98
Query: 487 CDIIKINSFVRKKETFLKRRQRLIGPQG 570
++I I + + + + R+IG +G
Sbjct: 99 LEVIDIEDYASSDNSIRRLKGRVIGKEG 126
>UniRef50_Q3LWA8 Cluster: Putative uncharacterized protein; n=1;
Bigelowiella natans|Rep: Putative uncharacterized
protein - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 153
Score = 43.2 bits (97), Expect = 0.009
Identities = 22/92 (23%), Positives = 44/92 (47%)
Frame = +1
Query: 232 ESKFATLFPKYREQYLKECWPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKA 411
E+KF L ++ Y + W + K+ + + + + + P I+ K
Sbjct: 5 ENKFTVLINTSKKHYFIKNWNRISKLFKSMQLNIIFEQSRRLIIISNQKNCIVPTILFKG 64
Query: 412 RDFMKLLSRSVPFEQASRVLDDEIGCDIIKIN 507
F++L++R+VP+ Q+ ++ +D IIKIN
Sbjct: 65 LMFIRLVNRNVPYMQSKKIFNDSHIGTIIKIN 96
>UniRef50_Q2NEN8 Cluster: Predicted RNA-binding protein; n=3;
Methanobacteriaceae|Rep: Predicted RNA-binding protein -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 233
Score = 42.7 bits (96), Expect = 0.012
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +1
Query: 334 ELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDIIKINSF 513
++D G++ + +T +T DP I KAR +K + R + A + +D++ +II + +
Sbjct: 37 KIDSDTGNIAISSTDETDDPLAIWKARYMIKAIGRGFNPDIALTLENDDLILEIINLQDY 96
Query: 514 VRK-KETFLKRRQRLIGPQG 570
V K K+ ++++ R+IG G
Sbjct: 97 VGKSKKALVRQKGRIIGKNG 116
>UniRef50_Q9V136 Cluster: Predicted RNA-binding protein; n=4;
Thermococcaceae|Rep: Predicted RNA-binding protein -
Pyrococcus abyssi
Length = 221
Score = 41.1 bits (92), Expect = 0.037
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +1
Query: 337 LDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDIIKINSFV 516
+D G + + +T++T DP + KARD ++ + R E+A R+L++ +II + +
Sbjct: 71 VDSETGEVWITSTKETDDPLAVWKARDIVQAIGRGFSPERAFRLLNEGEYLEIINLTDII 130
Query: 517 --RKKETFLKRRQRLIGPQG 570
+K + R R+IG +G
Sbjct: 131 IGNEKNALPRIRGRIIGRKG 150
>UniRef50_Q8TH62 Cluster: Predicted RNA-binding protein containing
KH domain; n=2; Euryarchaeota|Rep: Predicted RNA-binding
protein containing KH domain - Methanopyrus kandleri
Length = 202
Score = 38.7 bits (86), Expect = 0.20
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +1
Query: 337 LDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVL-DDEIGCDIIKINSF 513
+D G + ++ T + DP +IKA++ + + R E+A R+L +++ ++I +
Sbjct: 46 IDSKTGEVEIRPTERVKDPLDLIKAKECVLAIGRGFSPERAFRLLREEDASLEVIDLYEL 105
Query: 514 VRKKETFLKR-RQRLIGPQG 570
V + L+R R R+IG +G
Sbjct: 106 VGRNPKALERQRARIIGREG 125
>UniRef50_A3DNJ3 Cluster: KH, type 1, domain protein; n=3;
Desulfurococcales|Rep: KH, type 1, domain protein -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 200
Score = 36.3 bits (80), Expect = 1.0
Identities = 20/91 (21%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 301 QKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDE 480
++++ + +D G++ ++ T ++KARD ++ ++ E+A R+LD++
Sbjct: 37 EELMRRTRTIITIDSTTGTVIIEPASPTTTALELMKARDVVRAIAYGFSPERAFRLLDED 96
Query: 481 IGCDIIKINSFVRKKETFLKR-RQRLIGPQG 570
+I + +V + L+R + R+IG G
Sbjct: 97 QVLLVIDLKQYVGDRPNHLQRVKGRIIGEGG 127
>UniRef50_A3H623 Cluster: KH, type 1; n=1; Caldivirga maquilingensis
IC-167|Rep: KH, type 1 - Caldivirga maquilingensis
IC-167
Length = 184
Score = 34.3 bits (75), Expect = 4.2
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 346 IEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDDEIGCDIIKINSFVRK- 522
++ V T + +P +IKAR ++ L+ + A +L+D+ D++ ++ ++ K
Sbjct: 39 VKDDSVVLTPMQDANPDSVIKARQIIQALALGFSRDDALELLNDDKYLDVVDLSDYIGKD 98
Query: 523 KETFLKRRQRLIGPQGCYIK 582
KE L R + +I +G +K
Sbjct: 99 KENHLSRIKAIIIGEGGKVK 118
>UniRef50_Q1FP10 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Clostridium phytofermentans ISDg|Rep:
Binding-protein-dependent transport systems inner
membrane component precursor - Clostridium
phytofermentans ISDg
Length = 310
Score = 33.9 bits (74), Expect = 5.6
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +1
Query: 22 TIGXSLSF*VPNSK*ISLLNLFNKKIISLLATLNLIKTNMEVEXTN----SVDNA-WAMK 186
TIG L+F N +SL+ + NKK+ SL A L ++ N+E N SV A +AMK
Sbjct: 211 TIGLLLTFGYWNDWWLSLMYIDNKKLYSLQAVLMSVERNIEFLANNADGLSVSAAEYAMK 270
Query: 187 XPK 195
PK
Sbjct: 271 MPK 273
>UniRef50_Q7RQL2 Cluster: Putative uncharacterized protein PY01084;
n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY01084 - Plasmodium yoelii yoelii
Length = 1659
Score = 33.9 bits (74), Expect = 5.6
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Frame = +2
Query: 452 NKPLVC*MTKLDATLLKLIHLFAKKKPF*XXXXXXXXXXXVTLKSI---ELLTECYVLVQ 622
NK L + K+DA L+ ++ + K++ F + LKSI EL+T Y ++
Sbjct: 1445 NKELDKILKKVDANLISIMSIPMKEQLFNYIRHINRDKHIIKLKSILFKELITSLYKIIN 1504
Query: 623 GNTVSAVG---PYKGLVQVRRIVEDTMKNIHPMY 715
+ G + LV++R+I DT+ +++ MY
Sbjct: 1505 CSEQIYQGLEEDEQSLVKLRQIQNDTISDVNTMY 1538
>UniRef50_A7D0D1 Cluster: KH, type 1, domain protein; n=6;
Euryarchaeota|Rep: KH, type 1, domain protein -
Halorubrum lacusprofundi ATCC 49239
Length = 180
Score = 33.9 bits (74), Expect = 5.6
Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +1
Query: 298 VQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRVLDD 477
+++I ++ ++D GS+ ++ DP + A D +K + R E A +LD
Sbjct: 22 MREIEERANVRLDIDSESGSVAIEELD---DPVAALVAPDIIKAIGRGFKPETALSILDH 78
Query: 478 EI-GCDIIKINSFVRKKETFLKRRQRLIGPQG 570
++ D+I ++ R +++ R+IG G
Sbjct: 79 DLRTLDLIDLSEHTRNDNDLQRKKGRIIGENG 110
>UniRef50_O83582 Cluster: Uncharacterized protein TP_0572; n=1;
Treponema pallidum|Rep: Uncharacterized protein TP_0572
- Treponema pallidum
Length = 360
Score = 33.9 bits (74), Expect = 5.6
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -1
Query: 224 RPCGLSSGVNLGXFIAQALSTELVXSTSILVFIKFSVASKEM-IFLLKRLRREIYLEFG 51
R CG + ++ G +A A+S LV SIL F V + M KR++R YL +G
Sbjct: 118 RLCGSTGDLSTGFLVAGAVSMVLVLLMSILAVTSFKVVRRRMGAKTWKRVQRLAYLFYG 176
>UniRef50_A2F616 Cluster: Putative uncharacterized protein; n=7;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1486
Score = 33.5 bits (73), Expect = 7.4
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 229 EESKFATLFPKYREQYLKECWPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIK 408
EE F +FPK QYL+ C + + +++ L+EG+ T K W Y+ +
Sbjct: 316 EELTFEDVFPKINGQYLRYCMEAFK--MGHPYLLTFKPLVEGAHNENTNSKVWMFYLRVL 373
Query: 409 A 411
A
Sbjct: 374 A 374
>UniRef50_UPI000065DAE4 Cluster: Homolog of Homo sapiens "PREDICTED
"similar to matrilin 2 precursor; n=4; Euteleostomi|Rep:
Homolog of Homo sapiens "PREDICTED "similar to matrilin
2 precursor - Takifugu rubripes
Length = 842
Score = 33.1 bits (72), Expect = 9.7
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 397 IIIKARDFMKL-LSRSVPFEQASRVLDDEIGCDIIKINSFVRKKETFL 537
+I + +FMK+ S SVP + + DD C I+KIN VR F+
Sbjct: 182 VIKEIVNFMKISFSESVPRKSVPQEGDDHFNCAILKINDMVRSHGCFV 229
>UniRef50_Q6L2G6 Cluster: Putative RNA-binding protein; n=1;
Picrophilus torridus|Rep: Putative RNA-binding protein -
Picrophilus torridus
Length = 186
Score = 33.1 bits (72), Expect = 9.7
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 575 TLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVE 685
T + IE LT Y+ V GNTVS +G + G+ + VE
Sbjct: 118 TRQIIEELTNTYISVSGNTVSIIGDFIGIGYSKEAVE 154
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,584,619
Number of Sequences: 1657284
Number of extensions: 11272857
Number of successful extensions: 26720
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 26064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26709
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79932179145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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