Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_I24
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0148 + 1174097-1174289,1174539-1174672,1174760-1175098          108   7e-24
01_07_0123 + 41206782-41206844,41207701-41207782,41208587-412087...    97   2e-20
02_02_0155 + 7272563-7272630,7272934-7273031,7273491-7274057,727...    28   8.5  

>03_01_0148 + 1174097-1174289,1174539-1174672,1174760-1175098
          Length = 221

 Score =  108 bits (259), Expect = 7e-24
 Identities = 47/68 (69%), Positives = 61/68 (89%)
 Frame = +2

Query: 326 SKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEA 505
           SKQSR EKK+RK M KLG+KPV GV R+TI+++KNILFV++ PDV+K+P S+TY++FGEA
Sbjct: 75  SKQSRSEKKSRKAMMKLGMKPVTGVSRITIKRAKNILFVVSKPDVFKSPTSETYVIFGEA 134

Query: 506 KIEDLSTQ 529
           KIEDLS+Q
Sbjct: 135 KIEDLSSQ 142



 Score = 52.4 bits (120), Expect = 5e-07
 Identities = 24/40 (60%), Positives = 33/40 (82%)
 Frame = +1

Query: 661 GXDEKDVEIVMSQANVSRAKAVRALKNNQSDXVXAIMELT 780
           G + +D+++VM+QA+VSRAKAV+ALK +  D V AIMELT
Sbjct: 181 GIEPRDIDLVMTQASVSRAKAVKALKAHDGDIVSAIMELT 220


>01_07_0123 +
           41206782-41206844,41207701-41207782,41208587-41208717,
           41208758-41209147
          Length = 221

 Score = 96.7 bits (230), Expect = 2e-20
 Identities = 53/95 (55%), Positives = 65/95 (68%), Gaps = 19/95 (20%)
 Frame = +2

Query: 302 AGIDIVSKSKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKN----------------- 430
           AG D   +SKQSR EKK+RK M KLG+K + GV RVTI+KSKN                 
Sbjct: 50  AGGDASGRSKQSRSEKKSRKAMQKLGMKTITGVSRVTIKKSKNAHRIVIYHCILLNFSLH 109

Query: 431 --ILFVINSPDVYKNPHSDTYIVFGEAKIEDLSTQ 529
             ILFVI+ PDV+K+P+SDTY++FGEAKIEDLS+Q
Sbjct: 110 YQILFVISKPDVFKSPNSDTYVIFGEAKIEDLSSQ 144



 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = +1

Query: 661 GXDEKDVEIVMSQANVSRAKAVRALKNNQSDXVXAIMELT 780
           G + KD+E+VM+QA VSR++AV+ALK    D V AIMELT
Sbjct: 181 GVEPKDIELVMTQATVSRSRAVKALKAANGDIVTAIMELT 220


>02_02_0155 +
           7272563-7272630,7272934-7273031,7273491-7274057,
           7275121-7276085,7276201-7276388,7276497-7276938
          Length = 775

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -1

Query: 607 VPVVEASLPVAVVSGALNLSAAAHGGL 527
           +PV+ ASL V VVS  ++L   AH  L
Sbjct: 636 IPVLIASLVVLVVSNVIDLGTVAHAAL 662


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,493,854
Number of Sequences: 37544
Number of extensions: 345898
Number of successful extensions: 995
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)