Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_I24
         (877 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    28   0.32 
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   2.3  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   9.2  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 28.3 bits (60), Expect = 0.32
 Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
 Frame = +2

Query: 311  DIVSKSKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPD-VYKNPHSDTY 487
            D V + + +R    A   M        Q ++ +  +  + I FV+  PD   +N  + T 
Sbjct: 1300 DKVCRGETNRRWSMALSSMGGHSQTSAQSLQSIAGQTERKISFVLQEPDNESENSSNTTL 1359

Query: 488  IVFGEAKIEDLSTQATMGCSREIQGT 565
             + GE  ++ +     + C R + G+
Sbjct: 1360 TIQGEENVQRMWLATVVPCDRWLTGS 1385


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -3

Query: 134 EVILSRRRSLLKISEYEKSYL 72
           E +L  +++L++ISE EK YL
Sbjct: 375 EQLLHEKQNLIRISELEKDYL 395


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 12/55 (21%), Positives = 26/55 (47%)
 Frame = -1

Query: 409  HSLYSLYWFETEFTHYLSGLLLTTRLFRFADDVNSSNRVCDSTCIWCTCIFQFWN 245
            H+++    F++  T  L G++  T L        + + VC++T    + + Q W+
Sbjct: 1028 HAMFECPRFDSTRTELLHGVVPETLLEHMLQSPENWSNVCEATKRITSALQQDWD 1082


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,229
Number of Sequences: 2352
Number of extensions: 13091
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)