Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_I23
         (891 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    29   0.25 
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           26   1.3  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   9.4  

>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 28.7 bits (61), Expect = 0.25
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 383 CCNPYHWSRLCKPXXPPAAI 442
           C NPYH+ R+  P  PP  +
Sbjct: 135 CINPYHYKRVESPVLPPVLV 154


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 374 DNSCCNPYHWSRLCKP 421
           D+ C NPYH+ R+  P
Sbjct: 123 DSVCVNPYHYERVVSP 138


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 374 DNSCCNPYHWSR 409
           D  C NPYH++R
Sbjct: 118 DEVCINPYHYAR 129


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,430
Number of Sequences: 2352
Number of extensions: 8777
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)