Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_I23
(891 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012986-1|AAH12986.1| 496|Homo sapiens SMAD family member 6 pr... 39 0.028
AF043640-1|AAC00497.1| 496|Homo sapiens Smad6 protein. 39 0.028
AF041065-1|AAF14343.1| 496|Homo sapiens Smad6 protein protein. 39 0.028
AF037469-1|AAC82331.1| 496|Homo sapiens Smad6 protein. 39 0.028
AF035528-1|AAB94137.1| 496|Homo sapiens Smad6 protein. 39 0.028
BC074819-1|AAH74819.2| 426|Homo sapiens SMAD family member 7 pr... 34 0.80
BC074818-1|AAH74818.2| 426|Homo sapiens SMAD family member 7 pr... 34 0.80
BC052569-1|AAH52569.1| 344|Homo sapiens SMAD6 protein protein. 34 0.80
AF026559-1|AAL68977.1| 426|Homo sapiens Smad7 protein. 34 0.80
AF015261-1|AAB81354.1| 426|Homo sapiens Smad7 protein protein. 34 0.80
AF010193-1|AAB81246.1| 426|Homo sapiens MAD-related gene SMAD7 ... 34 0.80
AL356755-3|CAI23466.1| 299|Homo sapiens GDNF family receptor al... 33 1.8
AJ291674-1|CAC19691.1| 299|Homo sapiens putative GDNF family re... 33 1.8
AB075867-1|BAB85573.1| 357|Homo sapiens KIAA1987 protein protein. 31 7.4
BC101162-1|AAI01163.1| 201|Homo sapiens keratin associated prot... 30 9.8
BC101160-1|AAI01161.1| 201|Homo sapiens keratin associated prot... 30 9.8
BC101159-1|AAI01160.1| 201|Homo sapiens keratin associated prot... 30 9.8
BC004212-1|AAH04212.1| 201|Homo sapiens keratin associated prot... 30 9.8
BC004180-1|AAH04180.1| 201|Homo sapiens keratin associated prot... 30 9.8
AJ406943-1|CAC27582.1| 201|Homo sapiens keratin associated prot... 30 9.8
>BC012986-1|AAH12986.1| 496|Homo sapiens SMAD family member 6
protein.
Length = 496
Score = 38.7 bits (86), Expect = 0.028
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 383 CCNPYHWSRLCKPXXPP 433
CCNPYH+SRLC P PP
Sbjct: 260 CCNPYHFSRLCGPESPP 276
Score = 30.3 bits (65), Expect = 9.8
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 420 PKXPPPPYTRFA-MDNYKPXRSXREHXXRAEDKTXTGLTLAP 542
P+ PPPPY+R + D YKP E + L AP
Sbjct: 272 PESPPPPYSRLSPRDEYKPLDLSDSTLSYTETEATNSLITAP 313
>AF043640-1|AAC00497.1| 496|Homo sapiens Smad6 protein.
Length = 496
Score = 38.7 bits (86), Expect = 0.028
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 383 CCNPYHWSRLCKPXXPP 433
CCNPYH+SRLC P PP
Sbjct: 260 CCNPYHFSRLCGPESPP 276
Score = 30.3 bits (65), Expect = 9.8
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 420 PKXPPPPYTRFA-MDNYKPXRSXREHXXRAEDKTXTGLTLAP 542
P+ PPPPY+R + D YKP E + L AP
Sbjct: 272 PESPPPPYSRLSPRDEYKPLDLSDSTLSYTETEATNSLITAP 313
>AF041065-1|AAF14343.1| 496|Homo sapiens Smad6 protein protein.
Length = 496
Score = 38.7 bits (86), Expect = 0.028
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 383 CCNPYHWSRLCKPXXPP 433
CCNPYH+SRLC P PP
Sbjct: 260 CCNPYHFSRLCGPESPP 276
Score = 30.3 bits (65), Expect = 9.8
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 420 PKXPPPPYTRFA-MDNYKPXRSXREHXXRAEDKTXTGLTLAP 542
P+ PPPPY+R + D YKP E + L AP
Sbjct: 272 PESPPPPYSRLSPRDEYKPLDLSDSTLSYTETEATNSLITAP 313
>AF037469-1|AAC82331.1| 496|Homo sapiens Smad6 protein.
Length = 496
Score = 38.7 bits (86), Expect = 0.028
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 383 CCNPYHWSRLCKPXXPP 433
CCNPYH+SRLC P PP
Sbjct: 260 CCNPYHFSRLCGPESPP 276
Score = 30.3 bits (65), Expect = 9.8
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 420 PKXPPPPYTRFA-MDNYKPXRSXREHXXRAEDKTXTGLTLAP 542
P+ PPPPY+R + D YKP E + L AP
Sbjct: 272 PESPPPPYSRLSPRDEYKPLDLSDSTLSYTETEATNSLITAP 313
>AF035528-1|AAB94137.1| 496|Homo sapiens Smad6 protein.
Length = 496
Score = 38.7 bits (86), Expect = 0.028
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 383 CCNPYHWSRLCKPXXPP 433
CCNPYH+SRLC P PP
Sbjct: 260 CCNPYHFSRLCGPESPP 276
Score = 30.3 bits (65), Expect = 9.8
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 420 PKXPPPPYTRFA-MDNYKPXRSXREHXXRAEDKTXTGLTLAP 542
P+ PPPPY+R + D YKP E + L AP
Sbjct: 272 PESPPPPYSRLSPRDEYKPLDLSDSTLSYTETEATNSLITAP 313
>BC074819-1|AAH74819.2| 426|Homo sapiens SMAD family member 7
protein.
Length = 426
Score = 33.9 bits (74), Expect = 0.80
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 7/42 (16%)
Frame = +2
Query: 329 NLRDLSELRRMPHCTDNS-------CCNPYHWSRLCKPXXPP 433
+LR SE++R+ C CCNP+H SRLC+ PP
Sbjct: 167 DLRHSSEVKRLCCCESYGKINPELVCCNPHHLSRLCELESPP 208
>BC074818-1|AAH74818.2| 426|Homo sapiens SMAD family member 7
protein.
Length = 426
Score = 33.9 bits (74), Expect = 0.80
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 7/42 (16%)
Frame = +2
Query: 329 NLRDLSELRRMPHCTDNS-------CCNPYHWSRLCKPXXPP 433
+LR SE++R+ C CCNP+H SRLC+ PP
Sbjct: 167 DLRHSSEVKRLCCCESYGKINPELVCCNPHHLSRLCELESPP 208
>BC052569-1|AAH52569.1| 344|Homo sapiens SMAD6 protein protein.
Length = 344
Score = 33.9 bits (74), Expect = 0.80
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +2
Query: 383 CCNPYHWSRLCKP 421
CCNPYH+SRLC P
Sbjct: 260 CCNPYHFSRLCGP 272
>AF026559-1|AAL68977.1| 426|Homo sapiens Smad7 protein.
Length = 426
Score = 33.9 bits (74), Expect = 0.80
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 7/42 (16%)
Frame = +2
Query: 329 NLRDLSELRRMPHCTDNS-------CCNPYHWSRLCKPXXPP 433
+LR SE++R+ C CCNP+H SRLC+ PP
Sbjct: 167 DLRHSSEVKRLCCCESYGKINPELVCCNPHHLSRLCELESPP 208
>AF015261-1|AAB81354.1| 426|Homo sapiens Smad7 protein protein.
Length = 426
Score = 33.9 bits (74), Expect = 0.80
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 7/42 (16%)
Frame = +2
Query: 329 NLRDLSELRRMPHCTDNS-------CCNPYHWSRLCKPXXPP 433
+LR SE++R+ C CCNP+H SRLC+ PP
Sbjct: 167 DLRHSSEVKRLCCCESYGKINPELVCCNPHHLSRLCELESPP 208
>AF010193-1|AAB81246.1| 426|Homo sapiens MAD-related gene SMAD7
protein.
Length = 426
Score = 33.9 bits (74), Expect = 0.80
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 7/42 (16%)
Frame = +2
Query: 329 NLRDLSELRRMPHCTDNS-------CCNPYHWSRLCKPXXPP 433
+LR SE++R+ C CCNP+H SRLC+ PP
Sbjct: 167 DLRHSSEVKRLCCCESYGKINPELVCCNPHHLSRLCELESPP 208
>AL356755-3|CAI23466.1| 299|Homo sapiens GDNF family receptor alpha
4 protein.
Length = 299
Score = 32.7 bits (71), Expect = 1.8
Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = +2
Query: 242 GPAVPCAYRPRRLMTVGCASRSPGPSASQNLRDLSELRRMPHC-TDNSCCNPYH-WSRLC 415
GPA CA R R+ CA PGP+ L L+ R C + P+ W R
Sbjct: 90 GPA--CAERRRQTFVPSCAFSGPGPAPPSCLEPLNFCERSRVCRCARAAAGPWRGWGRGL 147
Query: 416 KP-XXPPAA 439
P PPAA
Sbjct: 148 SPAHRPPAA 156
>AJ291674-1|CAC19691.1| 299|Homo sapiens putative GDNF family
receptor alpha 4, GPI anchored isoform b protein.
Length = 299
Score = 32.7 bits (71), Expect = 1.8
Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = +2
Query: 242 GPAVPCAYRPRRLMTVGCASRSPGPSASQNLRDLSELRRMPHC-TDNSCCNPYH-WSRLC 415
GPA CA R R+ CA PGP+ L L+ R C + P+ W R
Sbjct: 90 GPA--CAERRRQTFVPSCAFSGPGPAPPSCLEPLNFCERSRVCRCARAAAGPWRGWGRGL 147
Query: 416 KP-XXPPAA 439
P PPAA
Sbjct: 148 SPAHRPPAA 156
>AB075867-1|BAB85573.1| 357|Homo sapiens KIAA1987 protein protein.
Length = 357
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 4/29 (13%)
Frame = +2
Query: 284 TVGCASRSPGPSASQN----LRDLSELRR 358
T GC SR P PSASQ L+DL +L R
Sbjct: 280 TAGCGSRGPSPSASQREHQALQDLVDLAR 308
>BC101162-1|AAI01163.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 30.3 bits (65), Expect = 9.8
Identities = 28/89 (31%), Positives = 33/89 (37%), Gaps = 3/89 (3%)
Frame = +2
Query: 197 CLTTCCEGWRGRWTRGPAVPCAYRPRRLMTVGCASRSPGPSASQNLRDLSELRRMPHCTD 376
C TTCC R V RP+ +V C PS Q + R P C
Sbjct: 66 CQTTCCRTTCCR--PSCCVSSCCRPQCCQSVCCQPTCCRPSCCQTTCCRTTCCR-PSCCV 122
Query: 377 NSCCNPY-HWSRLCKP--XXPPAAIHSFC 454
+SCC P S C+P P I S C
Sbjct: 123 SSCCRPQCCQSVCCQPTCCRPSCCISSSC 151
>BC101160-1|AAI01161.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 30.3 bits (65), Expect = 9.8
Identities = 28/89 (31%), Positives = 33/89 (37%), Gaps = 3/89 (3%)
Frame = +2
Query: 197 CLTTCCEGWRGRWTRGPAVPCAYRPRRLMTVGCASRSPGPSASQNLRDLSELRRMPHCTD 376
C TTCC R V RP+ +V C PS Q + R P C
Sbjct: 66 CQTTCCRTTCCR--PSCCVSSCCRPQCCQSVCCQPTCCRPSCCQTTCCRTTCCR-PSCCV 122
Query: 377 NSCCNPY-HWSRLCKP--XXPPAAIHSFC 454
+SCC P S C+P P I S C
Sbjct: 123 SSCCRPQCCQSVCCQPTCCRPSCCISSSC 151
>BC101159-1|AAI01160.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 30.3 bits (65), Expect = 9.8
Identities = 28/89 (31%), Positives = 33/89 (37%), Gaps = 3/89 (3%)
Frame = +2
Query: 197 CLTTCCEGWRGRWTRGPAVPCAYRPRRLMTVGCASRSPGPSASQNLRDLSELRRMPHCTD 376
C TTCC R V RP+ +V C PS Q + R P C
Sbjct: 66 CQTTCCRTTCCR--PSCCVSSCCRPQCCQSVCCQPTCCRPSCCQTTCCRTTCCR-PSCCV 122
Query: 377 NSCCNPY-HWSRLCKP--XXPPAAIHSFC 454
+SCC P S C+P P I S C
Sbjct: 123 SSCCRPQCCQSVCCQPTCCRPSCCISSSC 151
>BC004212-1|AAH04212.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 30.3 bits (65), Expect = 9.8
Identities = 28/89 (31%), Positives = 33/89 (37%), Gaps = 3/89 (3%)
Frame = +2
Query: 197 CLTTCCEGWRGRWTRGPAVPCAYRPRRLMTVGCASRSPGPSASQNLRDLSELRRMPHCTD 376
C TTCC R V RP+ +V C PS Q + R P C
Sbjct: 66 CQTTCCRTTCCR--PSCCVSSCCRPQCCQSVCCQPTCCRPSCCQTTCCRTTCCR-PSCCV 122
Query: 377 NSCCNPY-HWSRLCKP--XXPPAAIHSFC 454
+SCC P S C+P P I S C
Sbjct: 123 SSCCRPQCCQSVCCQPTCCRPSCCISSSC 151
>BC004180-1|AAH04180.1| 201|Homo sapiens keratin associated protein
4-12 protein.
Length = 201
Score = 30.3 bits (65), Expect = 9.8
Identities = 28/89 (31%), Positives = 33/89 (37%), Gaps = 3/89 (3%)
Frame = +2
Query: 197 CLTTCCEGWRGRWTRGPAVPCAYRPRRLMTVGCASRSPGPSASQNLRDLSELRRMPHCTD 376
C TTCC R V RP+ +V C PS Q + R P C
Sbjct: 66 CQTTCCRTTCCR--PSCCVSSCCRPQCCQSVCCQPTCCRPSCCQTTCCRTTCCR-PSCCV 122
Query: 377 NSCCNPY-HWSRLCKP--XXPPAAIHSFC 454
+SCC P S C+P P I S C
Sbjct: 123 SSCCRPQCCQSVCCQPTCCRPSCCISSSC 151
>AJ406943-1|CAC27582.1| 201|Homo sapiens keratin associated protein
4.12 protein.
Length = 201
Score = 30.3 bits (65), Expect = 9.8
Identities = 28/89 (31%), Positives = 33/89 (37%), Gaps = 3/89 (3%)
Frame = +2
Query: 197 CLTTCCEGWRGRWTRGPAVPCAYRPRRLMTVGCASRSPGPSASQNLRDLSELRRMPHCTD 376
C TTCC R V RP+ +V C PS Q + R P C
Sbjct: 66 CQTTCCRTTCCR--PSCCVSSCCRPQCCQSVCCQPTCCRPSCCQTTCCRTTCCR-PSCCV 122
Query: 377 NSCCNPY-HWSRLCKP--XXPPAAIHSFC 454
+SCC P S C+P P I S C
Sbjct: 123 SSCCRPQCCQSVCCQPTCCRPSCCISSSC 151
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,456,864
Number of Sequences: 237096
Number of extensions: 1257778
Number of successful extensions: 4644
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4593
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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