Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_I22
(915 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 36 0.040
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 36 0.040
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.38
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.38
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.38
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 32 0.50
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.66
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.66
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.66
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.66
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 31 0.87
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.5
AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical ... 31 1.5
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 30 2.0
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 2.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 2.4
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 30 2.7
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 3.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.6
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 4.6
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 4.6
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 4.6
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 35.9 bits (79), Expect = 0.040
Identities = 36/129 (27%), Positives = 37/129 (28%), Gaps = 3/129 (2%)
Frame = +1
Query: 298 GGXGPPPXXRGGKKXXFWXXGXXXGFLXPPXXXGXXXXPPPXXXXFXXGPGGGXGDFFXX 477
G GPPP GG G + G PPP F P G F
Sbjct: 97 GLGGPPPGMPGGVPPQAQPFNPHGGSMF--GGPGGPGGPPPFGQPFQQAP---QGMFNVP 151
Query: 478 XXPPPPXGGGGXXFWXXXXXXXXXXXXXXXXXXXXGXXPPP---GGXXGXPPXXGXPRGX 648
PPP GGGG G P GG G PP G P G
Sbjct: 152 TGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGP-GG 210
Query: 649 XXXXGXPXG 675
G P G
Sbjct: 211 PGGPGGPGG 219
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 35.9 bits (79), Expect = 0.040
Identities = 36/129 (27%), Positives = 37/129 (28%), Gaps = 3/129 (2%)
Frame = +1
Query: 298 GGXGPPPXXRGGKKXXFWXXGXXXGFLXPPXXXGXXXXPPPXXXXFXXGPGGGXGDFFXX 477
G GPPP GG G + G PPP F P G F
Sbjct: 377 GLGGPPPGMPGGVPPQAQPFNPHGGSMF--GGPGGPGGPPPFGQPFQQAP---QGMFNVP 431
Query: 478 XXPPPPXGGGGXXFWXXXXXXXXXXXXXXXXXXXXGXXPPP---GGXXGXPPXXGXPRGX 648
PPP GGGG G P GG G PP G P G
Sbjct: 432 TGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGP-GG 490
Query: 649 XXXXGXPXG 675
G P G
Sbjct: 491 PGGPGGPGG 499
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.38
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +1
Query: 583 GXXPPPGGXXGXPPXXGXPRGXXXXXGXPXGXPHXKXXXXXGXFXXXPPPP 735
G PPP G PP G P P G P G F PPPP
Sbjct: 740 GGPPPPPPPGGLPPISGGP---PPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Frame = +1
Query: 583 GXXPPPGGXXGXPPXXGXPRGXXXXXGXP--XGXPHXKXXXXXGXFXXXPPPPXXXXK 750
G PPP G PP G P G P G P G PPPP K
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 612 GXPPXXGXXPXXXFXXRXPXGXPPP*XXPXVXGFXXXAPPP 734
G PP G P P G PPP P GF PPP
Sbjct: 750 GLPPISGGPPPPP---PPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = +1
Query: 298 GGXGPPPXXRGGKKXXFWXXGXXXGFLXPPXXXGXXXXPPPXXXXFXXGPGGGXGDFFXX 477
GG PPP G PP G PPP P G F
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 478 XXPPPPXG 501
PPPP G
Sbjct: 784 PPPPPPPG 791
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 508 PPPPXGGGGXGXGKNPXPPP 449
PPPP GG G P PPP
Sbjct: 771 PPPPPPPGGFKGGPPPPPPP 790
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 510 PPPPXGGGGXXXXEKIPXPPPXXGXKXXXXGG 415
PPPP GG P PPP G GG
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGG 757
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.38
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +1
Query: 583 GXXPPPGGXXGXPPXXGXPRGXXXXXGXPXGXPHXKXXXXXGXFXXXPPPP 735
G PPP G PP G P P G P G F PPPP
Sbjct: 740 GGPPPPPPPGGLPPISGGP---PPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Frame = +1
Query: 583 GXXPPPGGXXGXPPXXGXPRGXXXXXGXP--XGXPHXKXXXXXGXFXXXPPPPXXXXK 750
G PPP G PP G P G P G P G PPPP K
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 612 GXPPXXGXXPXXXFXXRXPXGXPPP*XXPXVXGFXXXAPPP 734
G PP G P P G PPP P GF PPP
Sbjct: 750 GLPPISGGPPPPP---PPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = +1
Query: 298 GGXGPPPXXRGGKKXXFWXXGXXXGFLXPPXXXGXXXXPPPXXXXFXXGPGGGXGDFFXX 477
GG PPP G PP G PPP P G F
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 478 XXPPPPXG 501
PPPP G
Sbjct: 784 PPPPPPPG 791
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 508 PPPPXGGGGXGXGKNPXPPP 449
PPPP GG G P PPP
Sbjct: 771 PPPPPPPGGFKGGPPPPPPP 790
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 510 PPPPXGGGGXXXXEKIPXPPPXXGXKXXXXGG 415
PPPP GG P PPP G GG
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGG 757
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.38
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +1
Query: 583 GXXPPPGGXXGXPPXXGXPRGXXXXXGXPXGXPHXKXXXXXGXFXXXPPPP 735
G PPP G PP G P P G P G F PPPP
Sbjct: 323 GGPPPPPPPGGLPPISGGP---PPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Frame = +1
Query: 583 GXXPPPGGXXGXPPXXGXPRGXXXXXGXP--XGXPHXKXXXXXGXFXXXPPPPXXXXK 750
G PPP G PP G P G P G P G PPPP K
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 364
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 612 GXPPXXGXXPXXXFXXRXPXGXPPP*XXPXVXGFXXXAPPP 734
G PP G P P G PPP P GF PPP
Sbjct: 333 GLPPISGGPPPPP---PPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = +1
Query: 298 GGXGPPPXXRGGKKXXFWXXGXXXGFLXPPXXXGXXXXPPPXXXXFXXGPGGGXGDFFXX 477
GG PPP G PP G PPP P G F
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Query: 478 XXPPPPXG 501
PPPP G
Sbjct: 367 PPPPPPPG 374
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 508 PPPPXGGGGXGXGKNPXPPP 449
PPPP GG G P PPP
Sbjct: 354 PPPPPPPGGFKGGPPPPPPP 373
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 510 PPPPXGGGGXXXXEKIPXPPPXXGXKXXXXGG 415
PPPP GG P PPP G GG
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGG 340
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 32.3 bits (70), Expect = 0.50
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3
Query: 450 GGGXGFFPXPXPPPPXGGGG 509
GGG G FP P PPP GGGG
Sbjct: 205 GGGSGRFPPP--PPPYGGGG 222
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 442 GPGGGXGDFFXXXXPPPPXGGGG 510
G GGG G F PPPP GGGG
Sbjct: 203 GSGGGSGRF---PPPPPPYGGGG 222
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.9 bits (69), Expect = 0.66
Identities = 25/79 (31%), Positives = 26/79 (32%), Gaps = 4/79 (5%)
Frame = +3
Query: 294 PGGXGAP--PXXXGGEKXXXLGXXGXPXFFXPPXXXXXXXXPPPXAXXFFXRXXGGGXGF 467
P GAP P GG G G P + PP PPP GF
Sbjct: 394 PSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGP--GAYGPPPTGF 451
Query: 468 FPXPXPPPPXGG--GGXXF 518
P PPP G GG F
Sbjct: 452 PPVGAPPPGAAGAPGGNPF 470
Score = 31.9 bits (69), Expect = 0.66
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +1
Query: 583 GXXPPPGGXXGXPPXXGXPRGXXXXXG-XPXGXPHXKXXXXXGXFXXXPPPP 735
G PPP G G P G P+G G P G P G PPP
Sbjct: 408 GYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPP 459
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +1
Query: 295 PGGXGPPPXXRGGKKXXFW-XXGXXXGFLXPPXXXGXXXXPPP 420
PGG GPPP G + G GF PP PPP
Sbjct: 406 PGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPP 448
Score = 28.3 bits (60), Expect = 8.1
Identities = 24/75 (32%), Positives = 25/75 (33%), Gaps = 7/75 (9%)
Frame = -3
Query: 508 PPP-----PXGGGGXGXGKNPXPP--PXXRXKKXXAXGGGKXXXXXSXGGXKNXGXPXXP 350
PPP P G GG G G P PP P GG GG G P
Sbjct: 392 PPPSAFGAPQGPGGPG-GYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTG 450
Query: 349 KXXXFSPPXXXGGAP 305
+PP GAP
Sbjct: 451 FPPVGAPPPGAAGAP 465
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.66
Identities = 20/72 (27%), Positives = 23/72 (31%)
Frame = -3
Query: 508 PPPPXGGGGXGXGKNPXPPPXXRXKKXXAXGGGKXXXXXSXGGXKNXGXPXXPKXXXFSP 329
PPPP G +P PPP G S G P P+ P
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 328 PXXXGGAPXPPG 293
P G+P P G
Sbjct: 300 PPPPRGSP-PTG 310
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/71 (25%), Positives = 19/71 (26%)
Frame = -3
Query: 508 PPPPXGGGGXGXGKNPXPPPXXRXKKXXAXGGGKXXXXXSXGGXKNXGXPXXPKXXXFSP 329
PPPP G PPP G G P P+ P
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP-PQAGGSPP 322
Query: 328 PXXXGGAPXPP 296
P G P PP
Sbjct: 323 PAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.66
Identities = 20/72 (27%), Positives = 23/72 (31%)
Frame = -3
Query: 508 PPPPXGGGGXGXGKNPXPPPXXRXKKXXAXGGGKXXXXXSXGGXKNXGXPXXPKXXXFSP 329
PPPP G +P PPP G S G P P+ P
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 328 PXXXGGAPXPPG 293
P G+P P G
Sbjct: 321 PPPPRGSP-PTG 331
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/71 (25%), Positives = 19/71 (26%)
Frame = -3
Query: 508 PPPPXGGGGXGXGKNPXPPPXXRXKKXXAXGGGKXXXXXSXGGXKNXGXPXXPKXXXFSP 329
PPPP G PPP G G P P+ P
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP-PQAGGSPP 343
Query: 328 PXXXGGAPXPP 296
P G P PP
Sbjct: 344 PAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.66
Identities = 20/72 (27%), Positives = 23/72 (31%)
Frame = -3
Query: 508 PPPPXGGGGXGXGKNPXPPPXXRXKKXXAXGGGKXXXXXSXGGXKNXGXPXXPKXXXFSP 329
PPPP G +P PPP G S G P P+ P
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 328 PXXXGGAPXPPG 293
P G+P P G
Sbjct: 306 PPPPRGSP-PTG 316
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/71 (25%), Positives = 19/71 (26%)
Frame = -3
Query: 508 PPPPXGGGGXGXGKNPXPPPXXRXKKXXAXGGGKXXXXXSXGGXKNXGXPXXPKXXXFSP 329
PPPP G PPP G G P P+ P
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP-PQAGGSPP 328
Query: 328 PXXXGGAPXPP 296
P G P PP
Sbjct: 329 PAGTGSPPPPP 339
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 31.5 bits (68), Expect = 0.87
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 432 FFXRXXGGGXGFFPXPXPPPPXGGG 506
F GGG G P PPPP GGG
Sbjct: 16 FLFNLLGGGGGGCCAPPPPPPCGGG 40
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -3
Query: 493 GGGGXGXGKNPXPPPXXRXKKXXAXGGGKXXXXXSXGGXKNXG 365
GGGG G G P PPP GGG GG G
Sbjct: 44 GGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCG 86
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -3
Query: 493 GGGGXGXGKNPXPPPXXRXKKXXAXGGGKXXXXXSXGG 380
GGGG G G P PPP GGG GG
Sbjct: 101 GGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGG 138
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 450 GGGXGFFPXPXPPPPXGGGG 509
GGG G P PPPP GGG
Sbjct: 45 GGGCGGGCAPPPPPPACGGG 64
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 450 GGGXGFFPXPXPPPPXGGGG 509
GGG G P PPPP GGG
Sbjct: 102 GGGCGGGCAPPPPPPACGGG 121
>AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical
protein Y48C3A.8 protein.
Length = 291
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/72 (30%), Positives = 23/72 (31%), Gaps = 3/72 (4%)
Frame = -3
Query: 499 PXGGGGXGXGKNPXPPPXXRXKKXXAXGGGKXXXXXSXGGXKNXGXPXXPKXXXFSPP-- 326
P GGGG G + PPP GGG S N P P S P
Sbjct: 157 PTGGGGGG---SVPPPPPAATAAVSMNGGGPGSAPGSAHSVNNNVNPGTPGSNPLSNPMS 213
Query: 325 -XXXGGAPXPPG 293
P PPG
Sbjct: 214 NPPLSSGPPPPG 225
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 450 GGGXGFFPXPXPPPPXGGGG 509
GGG G P P PP P G GG
Sbjct: 24 GGGCGCAPPPPPPSPCGCGG 43
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 411 PPPXAXXFFXRXXGGGXGFFPXPXPPPPXGGGG 509
PPP G G P P PPPP G GG
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 508 PPPPXGGGGXGXGKNPXPPP 449
PPPP G G G P PPP
Sbjct: 635 PPPPMGLPAVGAGAPPPPPP 654
Score = 27.5 bits (58), Expect(2) = 2.4
Identities = 16/60 (26%), Positives = 16/60 (26%)
Frame = +2
Query: 668 PRXPPTXXXXXXXGXFXXRPPPPGXXXKXXXXXXXXXXXXXXXXXXPGXXPXXNPPPGPP 847
P PP G RPPPP P P PPP PP
Sbjct: 555 PAAPPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPP 614
Score = 21.0 bits (42), Expect(2) = 2.4
Identities = 8/20 (40%), Positives = 8/20 (40%)
Frame = +2
Query: 830 PPPGPPXXXPPGXNRXTLPP 889
PPP PP P PP
Sbjct: 632 PPPPPPPMGLPAVGAGAPPP 651
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 411 PPPXAXXFFXRXXGGGXGFFPXPXPPPPXGGGG 509
PPP G G P P PPPP G GG
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 508 PPPPXGGGGXGXGKNPXPPP 449
PPPP G G G P PPP
Sbjct: 461 PPPPMGLPAVGAGAPPPPPP 480
Score = 27.5 bits (58), Expect(2) = 2.4
Identities = 16/60 (26%), Positives = 16/60 (26%)
Frame = +2
Query: 668 PRXPPTXXXXXXXGXFXXRPPPPGXXXKXXXXXXXXXXXXXXXXXXPGXXPXXNPPPGPP 847
P PP G RPPPP P P PPP PP
Sbjct: 381 PAAPPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPP 440
Score = 21.0 bits (42), Expect(2) = 2.4
Identities = 8/20 (40%), Positives = 8/20 (40%)
Frame = +2
Query: 830 PPPGPPXXXPPGXNRXTLPP 889
PPP PP P PP
Sbjct: 458 PPPPPPPMGLPAVGAGAPPP 477
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 508 PPPPXGGGGXGXGKNPXPPPXXRXKKXXAXGGG 410
P GGGG G G P PPP A GGG
Sbjct: 20 PSAGGGGGGCGCGA-PPPPPACAPPPAPACGGG 51
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +3
Query: 450 GGGXGFFPXPXPPPPXGGGG 509
GGG G P P PPPP G GG
Sbjct: 24 GGGCGCAPPP-PPPPCGCGG 42
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +3
Query: 294 PGGXGAPPXXXGGEKXXXLGXXGXPXFFXPPXXXXXXXXPPPXAXXFFXRXXGGGXGFFP 473
P G G PP GE G PP PPP G P
Sbjct: 37 PKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNASRRP 96
Query: 474 XPXPPPPXGGG 506
PPPP G G
Sbjct: 97 ---PPPPKGTG 104
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +3
Query: 294 PGGXGAPPXXXGGEKXXXLGXXGXPXFFXPPXXXXXXXXPPPXAXXFFXRXXGGGXGFFP 473
P G G PP GE G PP PPP G G
Sbjct: 68 PKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTG---EPQDLSGEGNAS 124
Query: 474 XPXPPPPXGGG 506
PPPP G G
Sbjct: 125 RRPPPPPKGTG 135
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +3
Query: 294 PGGXGAPPXXXGGEKXXXLGXXGXPXFFXPPXXXXXXXXPPPXAXXFFXRXXGGGXGFFP 473
P G G PP GE G PP PPP G G
Sbjct: 100 PKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEP----QDLSGEGNAS 155
Query: 474 XPXPPPPXGGG 506
PPPP G G
Sbjct: 156 RRPPPPPKGTG 166
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/83 (25%), Positives = 22/83 (26%), Gaps = 4/83 (4%)
Frame = +2
Query: 665 PPRXPPTXXXXXXXGXFXXRPPPPGXXXKXXXXXXXXXXXXXXXXXXPGXXPXXNPP--- 835
PP PP PPPP PG P PP
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 356
Query: 836 -PGPPXXXPPGXNRXTLPPFSXG 901
GP PP +R PP G
Sbjct: 357 SAGPGMYPPPPPSRPPAPPSGHG 379
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = -3
Query: 508 PPPPXGGGGXGXGKNPXPPPXXRXKKXXAXGGGKXXXXXSXGGXKNXGXPXXPKXXXFSP 329
PPPP G G G P PPP GG P P +P
Sbjct: 319 PPPPSRFGPPGMGGMPPPPPPG----MRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAP 374
Query: 328 PXXXGGAPXPP 296
P G P PP
Sbjct: 375 PSGHGMIPPPP 385
Score = 28.3 bits (60), Expect = 8.1
Identities = 23/87 (26%), Positives = 24/87 (27%)
Frame = +2
Query: 629 GGXPXXXXXAAXPPRXPPTXXXXXXXGXFXXRPPPPGXXXKXXXXXXXXXXXXXXXXXXP 808
G P PP PP+ G PPPPG P
Sbjct: 305 GRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP-PPPPGMRYPGGMPPPPPPRYPSAG---P 360
Query: 809 GXXPXXNPPPGPPXXXPPGXNRXTLPP 889
G P PPP P P G PP
Sbjct: 361 GMYPP--PPPSRPPAPPSGHGMIPPPP 385
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/83 (25%), Positives = 22/83 (26%), Gaps = 4/83 (4%)
Frame = +2
Query: 665 PPRXPPTXXXXXXXGXFXXRPPPPGXXXKXXXXXXXXXXXXXXXXXXPGXXPXXNPP--- 835
PP PP PPPP PG P PP
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 366
Query: 836 -PGPPXXXPPGXNRXTLPPFSXG 901
GP PP +R PP G
Sbjct: 367 SAGPGMYPPPPPSRPPAPPSGHG 389
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = -3
Query: 508 PPPPXGGGGXGXGKNPXPPPXXRXKKXXAXGGGKXXXXXSXGGXKNXGXPXXPKXXXFSP 329
PPPP G G G P PPP GG P P +P
Sbjct: 329 PPPPSRFGPPGMGGMPPPPPPG----MRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAP 384
Query: 328 PXXXGGAPXPP 296
P G P PP
Sbjct: 385 PSGHGMIPPPP 395
Score = 28.3 bits (60), Expect = 8.1
Identities = 23/87 (26%), Positives = 24/87 (27%)
Frame = +2
Query: 629 GGXPXXXXXAAXPPRXPPTXXXXXXXGXFXXRPPPPGXXXKXXXXXXXXXXXXXXXXXXP 808
G P PP PP+ G PPPPG P
Sbjct: 315 GRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP-PPPPGMRYPGGMPPPPPPRYPSAG---P 370
Query: 809 GXXPXXNPPPGPPXXXPPGXNRXTLPP 889
G P PPP P P G PP
Sbjct: 371 GMYPP--PPPSRPPAPPSGHGMIPPPP 395
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 450 GGGXGFFPXPXPPPPXGG 503
GG GF P P PPPP G
Sbjct: 667 GGLGGFMPPPPPPPPMPG 684
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 450 GGGXGFFPXPXPPPPXGG 503
GG GF P P PPPP G
Sbjct: 667 GGLGGFMPPPPPPPPMPG 684
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/75 (25%), Positives = 21/75 (28%)
Frame = +3
Query: 294 PGGXGAPPXXXGGEKXXXLGXXGXPXFFXPPXXXXXXXXPPPXAXXFFXRXXGGGXGFFP 473
P G PP G + G P PP P G + P
Sbjct: 253 PAGPPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQDGGPGTDAAYCP 312
Query: 474 XPXPPPPXGGGGXXF 518
P P GGGG F
Sbjct: 313 CPPRTPAGGGGGGDF 327
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,984,039
Number of Sequences: 27780
Number of extensions: 359258
Number of successful extensions: 2353
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1773
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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