Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_I21
         (931 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0608 - 5013076-5013489,5014698-5015228,5015632-5016005,501...    85   8e-17
08_01_0607 + 5335542-5335806,5335998-5336371,5336854-5337384,533...    80   3e-15
02_01_0450 + 3234378-3234834,3235118-3235223,3235722-3235920,323...    30   3.0  
02_01_0592 - 4390493-4390702,4391581-4391748,4392496-4392660,439...    29   5.3  

>12_01_0608 -
           5013076-5013489,5014698-5015228,5015632-5016005,
           5016389-5016637,5016942-5017047
          Length = 557

 Score = 85.0 bits (201), Expect = 8e-17
 Identities = 43/92 (46%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
 Frame = +2

Query: 308 NKMSE--ANVLVIGGGGREHALCWKLADSPNVKKIYCAPGSVGISTTKKVESI-ELDIKN 478
           +K+SE    VLVIGGGGREHALC+ L  SP+   ++CAPG+ GI+ +     I +LDI N
Sbjct: 115 SKISEERVTVLVIGGGGREHALCYALERSPSCDAVFCAPGNSGIAQSGDATCIPDLDISN 174

Query: 479 YSALAXWCKDNIIDLVVIGPEDPLAHGIVDXL 574
             A+  +C++  + LVV+GPE PL  G+ + L
Sbjct: 175 SDAVISFCRNWGVGLVVVGPEAPLVAGLANEL 206



 Score = 34.7 bits (76), Expect = 0.11
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +3

Query: 585 GIPCFGPNKAGAQIEAXKDWAKRXMTKYXXP 677
           GIP FGP+   A +E  KD+ K+   KY  P
Sbjct: 210 GIPTFGPSSEAAALEGSKDFMKKLCDKYHIP 240


>08_01_0607 +
           5335542-5335806,5335998-5336371,5336854-5337384,
           5338300-5338713
          Length = 527

 Score = 79.8 bits (188), Expect = 3e-15
 Identities = 38/83 (45%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
 Frame = +2

Query: 329 VLVIGGGGREHALCWKLADSPNVKKIYCAPGSVGISTTKKVESI-ELDIKNYSALAXWCK 505
           VLVIGGGGREHALC+ L  SP+   + CAPG+ GI+ +     I +LD+ +  A+  +C 
Sbjct: 94  VLVIGGGGREHALCYALNRSPSCDAVLCAPGNAGIAQSGDATCISDLDVSDSDAVIAFCC 153

Query: 506 DNIIDLVVIGPEDPLAHGIVDXL 574
              + +VV+GPE PL  G+V+ L
Sbjct: 154 KRGVGMVVVGPEAPLVAGLVNDL 176



 Score = 32.7 bits (71), Expect = 0.43
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 588 IPCFGPNKAGAQIEAXKDWAKRXMTKYXXP 677
           IP FGP+   A +E  KD+ K+   KY  P
Sbjct: 181 IPAFGPSSEAAALEGSKDFMKKLCDKYNIP 210


>02_01_0450 +
           3234378-3234834,3235118-3235223,3235722-3235920,
           3236119-3236187,3236299-3236373,3236484-3236582,
           3236694-3236864,3237394-3237519
          Length = 433

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = -2

Query: 429 PTLPGAQ*IFFTLGESASFQQRACSRPPPPITKTFASDILFR-NYTKLKKTFPIFNRF 259
           PT PGA  +  T+ E A+ +  A    PPPIT+T    +L R   T  +K   ++ RF
Sbjct: 371 PTRPGA--VQITMQELAA-KGLAAQITPPPITRTDLDKVLARQKATVSEKDLEVYTRF 425


>02_01_0592 -
           4390493-4390702,4391581-4391748,4392496-4392660,
           4393113-4393469
          Length = 299

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +2

Query: 314 MSEANVLVIGG-GGREHALCWKLADSPNVKKIYCAPGSVGIS 436
           M+ A     GG GGR +AL   L DS   +K+Y   G+V +S
Sbjct: 1   MTVAAAAASGGVGGRRYALLLALNDSEYARKVYGGYGNVFVS 42


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,962,590
Number of Sequences: 37544
Number of extensions: 358950
Number of successful extensions: 714
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)