Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_I21
(931 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208785-1|BAD92022.1| 1046|Homo sapiens phosphoribosylglycinami... 97 8e-20
X54199-1|CAA38119.1| 1010|Homo sapiens glycinamide ribonucleotid... 95 3e-19
D32051-1|BAA06809.1| 433|Homo sapiens GARS protein protein. 95 3e-19
BC107712-1|AAI07713.1| 1010|Homo sapiens phosphoribosylglycinami... 95 3e-19
BC101565-1|AAI01566.1| 433|Homo sapiens phosphoribosylglycinami... 95 3e-19
BC093641-1|AAH93641.1| 433|Homo sapiens phosphoribosylglycinami... 95 3e-19
BC038958-1|AAH38958.1| 433|Homo sapiens phosphoribosylglycinami... 95 3e-19
X57527-1|CAA40748.1| 744|Homo sapiens alpha 1(VIII) collagen pr... 31 7.9
BT009917-1|AAP88919.1| 744|Homo sapiens collagen, type VIII, al... 31 7.9
BC013581-1|AAH13581.1| 744|Homo sapiens collagen, type VIII, al... 31 7.9
AY550974-1|AAT52220.1| 745|Homo sapiens cell proliferation-indu... 31 7.9
>AB208785-1|BAD92022.1| 1046|Homo sapiens phosphoribosylglycinamide
formyltransferase, phosphoribosylglycinamide syntheta
protein.
Length = 1046
Score = 97.1 bits (231), Expect = 8e-20
Identities = 43/91 (47%), Positives = 63/91 (69%)
Frame = +2
Query: 302 FLNKMSEANVLVIGGGGREHALCWKLADSPNVKKIYCAPGSVGISTTKKVESIELDIKNY 481
F ++ A VL+IG GGREH L WKLA S +VK++ APG+ G + ++K+ + + I ++
Sbjct: 32 FTDRTMAARVLIIGSGGREHTLAWKLAQSHHVKQVLVAPGNAGTACSEKISNTAISISDH 91
Query: 482 SALAXWCKDNIIDLVVIGPEDPLAHGIVDXL 574
+ALA +CK+ I+ VV+GPE PLA GIV L
Sbjct: 92 TALAQFCKEKKIEFVVVGPEAPLAAGIVGNL 122
Score = 35.1 bits (77), Expect = 0.37
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 579 SYGIPCFGPNKAGAQIEAXKDWAKRXMTKYXXP 677
S G+ CFGP AQ+E+ K +AK M ++ P
Sbjct: 124 SAGVQCFGPTAEAAQLESSKRFAKEFMDRHGIP 156
>X54199-1|CAA38119.1| 1010|Homo sapiens glycinamide ribonucleotide
synthetase-aminoimidazole ribonucleotide synthetase-
protein.
Length = 1010
Score = 95.1 bits (226), Expect = 3e-19
Identities = 42/84 (50%), Positives = 60/84 (71%)
Frame = +2
Query: 323 ANVLVIGGGGREHALCWKLADSPNVKKIYCAPGSVGISTTKKVESIELDIKNYSALAXWC 502
A VL+IG GGREH L WKLA S +VK++ APG+ G + ++K+ + + I +++ALA +C
Sbjct: 3 ARVLIIGSGGREHTLAWKLAQSHHVKQVLVAPGNAGTACSEKISNTAISISDHTALAQFC 62
Query: 503 KDNIIDLVVIGPEDPLAHGIVDXL 574
K+ I+ VV+GPE PLA GIV L
Sbjct: 63 KEKKIEFVVVGPEAPLAAGIVGNL 86
Score = 35.1 bits (77), Expect = 0.37
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 579 SYGIPCFGPNKAGAQIEAXKDWAKRXMTKYXXP 677
S G+ CFGP AQ+E+ K +AK M ++ P
Sbjct: 88 SAGVQCFGPTAEAAQLESSKRFAKEFMDRHGIP 120
>D32051-1|BAA06809.1| 433|Homo sapiens GARS protein protein.
Length = 433
Score = 95.1 bits (226), Expect = 3e-19
Identities = 42/84 (50%), Positives = 60/84 (71%)
Frame = +2
Query: 323 ANVLVIGGGGREHALCWKLADSPNVKKIYCAPGSVGISTTKKVESIELDIKNYSALAXWC 502
A VL+IG GGREH L WKLA S +VK++ APG+ G + ++K+ + + I +++ALA +C
Sbjct: 3 ARVLIIGSGGREHTLAWKLAQSHHVKQVLVAPGNAGTACSEKISNTAISISDHTALAQFC 62
Query: 503 KDNIIDLVVIGPEDPLAHGIVDXL 574
K+ I+ VV+GPE PLA GIV L
Sbjct: 63 KEKKIEFVVVGPEAPLAAGIVGNL 86
Score = 35.1 bits (77), Expect = 0.37
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 579 SYGIPCFGPNKAGAQIEAXKDWAKRXMTKYXXP 677
S G+ CFGP AQ+E+ K +AK M ++ P
Sbjct: 88 SAGVQCFGPTAEAAQLESSKRFAKEFMDRHGIP 120
>BC107712-1|AAI07713.1| 1010|Homo sapiens phosphoribosylglycinamide
formyltransferase, phosphoribosylglycinamide syntheta
protein.
Length = 1010
Score = 95.1 bits (226), Expect = 3e-19
Identities = 42/84 (50%), Positives = 60/84 (71%)
Frame = +2
Query: 323 ANVLVIGGGGREHALCWKLADSPNVKKIYCAPGSVGISTTKKVESIELDIKNYSALAXWC 502
A VL+IG GGREH L WKLA S +VK++ APG+ G + ++K+ + + I +++ALA +C
Sbjct: 3 ARVLIIGSGGREHTLAWKLAQSHHVKQVLVAPGNAGTACSEKISNTAISISDHTALAQFC 62
Query: 503 KDNIIDLVVIGPEDPLAHGIVDXL 574
K+ I+ VV+GPE PLA GIV L
Sbjct: 63 KEKKIEFVVVGPEAPLAAGIVGNL 86
Score = 35.1 bits (77), Expect = 0.37
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 579 SYGIPCFGPNKAGAQIEAXKDWAKRXMTKYXXP 677
S G+ CFGP AQ+E+ K +AK M ++ P
Sbjct: 88 SAGVQCFGPTAEAAQLESSKRFAKEFMDRHGIP 120
>BC101565-1|AAI01566.1| 433|Homo sapiens phosphoribosylglycinamide
formyltransferase, phosphoribosylglycinamide syntheta
protein.
Length = 433
Score = 95.1 bits (226), Expect = 3e-19
Identities = 42/84 (50%), Positives = 60/84 (71%)
Frame = +2
Query: 323 ANVLVIGGGGREHALCWKLADSPNVKKIYCAPGSVGISTTKKVESIELDIKNYSALAXWC 502
A VL+IG GGREH L WKLA S +VK++ APG+ G + ++K+ + + I +++ALA +C
Sbjct: 3 ARVLIIGSGGREHTLAWKLAQSHHVKQVLVAPGNAGTACSEKISNTAISISDHTALAQFC 62
Query: 503 KDNIIDLVVIGPEDPLAHGIVDXL 574
K+ I+ VV+GPE PLA GIV L
Sbjct: 63 KEKKIEFVVVGPEAPLAAGIVGNL 86
Score = 35.1 bits (77), Expect = 0.37
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 579 SYGIPCFGPNKAGAQIEAXKDWAKRXMTKYXXP 677
S G+ CFGP AQ+E+ K +AK M ++ P
Sbjct: 88 SAGVQCFGPTAEAAQLESSKRFAKEFMDRHGIP 120
>BC093641-1|AAH93641.1| 433|Homo sapiens phosphoribosylglycinamide
formyltransferase, phosphoribosylglycinamide syntheta
protein.
Length = 433
Score = 95.1 bits (226), Expect = 3e-19
Identities = 42/84 (50%), Positives = 60/84 (71%)
Frame = +2
Query: 323 ANVLVIGGGGREHALCWKLADSPNVKKIYCAPGSVGISTTKKVESIELDIKNYSALAXWC 502
A VL+IG GGREH L WKLA S +VK++ APG+ G + ++K+ + + I +++ALA +C
Sbjct: 3 ARVLIIGSGGREHTLAWKLAQSHHVKQVLVAPGNAGTACSEKISNTAISISDHTALAQFC 62
Query: 503 KDNIIDLVVIGPEDPLAHGIVDXL 574
K+ I+ VV+GPE PLA GIV L
Sbjct: 63 KEKKIEFVVVGPEAPLAAGIVGNL 86
Score = 35.1 bits (77), Expect = 0.37
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 579 SYGIPCFGPNKAGAQIEAXKDWAKRXMTKYXXP 677
S G+ CFGP AQ+E+ K +AK M ++ P
Sbjct: 88 SAGVQCFGPTAEAAQLESSKRFAKEFMDRHGIP 120
>BC038958-1|AAH38958.1| 433|Homo sapiens phosphoribosylglycinamide
formyltransferase, phosphoribosylglycinamide syntheta
protein.
Length = 433
Score = 95.1 bits (226), Expect = 3e-19
Identities = 42/84 (50%), Positives = 60/84 (71%)
Frame = +2
Query: 323 ANVLVIGGGGREHALCWKLADSPNVKKIYCAPGSVGISTTKKVESIELDIKNYSALAXWC 502
A VL+IG GGREH L WKLA S +VK++ APG+ G + ++K+ + + I +++ALA +C
Sbjct: 3 ARVLIIGSGGREHTLAWKLAQSHHVKQVLVAPGNAGTACSEKISNTAISISDHTALAQFC 62
Query: 503 KDNIIDLVVIGPEDPLAHGIVDXL 574
K+ I+ VV+GPE PLA GIV L
Sbjct: 63 KEKKIEFVVVGPEAPLAAGIVGNL 86
Score = 35.1 bits (77), Expect = 0.37
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 579 SYGIPCFGPNKAGAQIEAXKDWAKRXMTKYXXP 677
S G+ CFGP AQ+E+ K +AK M ++ P
Sbjct: 88 SAGVQCFGPTAEAAQLESSKRFAKEFMDRHGIP 120
>X57527-1|CAA40748.1| 744|Homo sapiens alpha 1(VIII) collagen
protein.
Length = 744
Score = 30.7 bits (66), Expect = 7.9
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +2
Query: 749 LPRLLGSEXLPGLPARQGLWVGXXXXKXRGPXKXF*XKXLPGXPXXXSXPGP 904
+P LLG + PG+P QGL GP +PG PGP
Sbjct: 475 VPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGP 526
>BT009917-1|AAP88919.1| 744|Homo sapiens collagen, type VIII, alpha
1 protein.
Length = 744
Score = 30.7 bits (66), Expect = 7.9
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +2
Query: 749 LPRLLGSEXLPGLPARQGLWVGXXXXKXRGPXKXF*XKXLPGXPXXXSXPGP 904
+P LLG + PG+P QGL GP +PG PGP
Sbjct: 475 VPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGP 526
>BC013581-1|AAH13581.1| 744|Homo sapiens collagen, type VIII, alpha
1 protein.
Length = 744
Score = 30.7 bits (66), Expect = 7.9
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +2
Query: 749 LPRLLGSEXLPGLPARQGLWVGXXXXKXRGPXKXF*XKXLPGXPXXXSXPGP 904
+P LLG + PG+P QGL GP +PG PGP
Sbjct: 475 VPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGP 526
>AY550974-1|AAT52220.1| 745|Homo sapiens cell
proliferation-inducing protein 41 protein.
Length = 745
Score = 30.7 bits (66), Expect = 7.9
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +2
Query: 749 LPRLLGSEXLPGLPARQGLWVGXXXXKXRGPXKXF*XKXLPGXPXXXSXPGP 904
+P LLG + PG+P QGL GP +PG PGP
Sbjct: 476 VPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGP 527
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,374,658
Number of Sequences: 237096
Number of extensions: 2199364
Number of successful extensions: 3598
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3595
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12158972418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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