Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_I18
(878 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0220 + 32452831-32452944,32453618-32453911,32454416-324545... 127 1e-29
10_06_0078 + 10416950-10417174,10417595-10417679,10417782-104179... 113 2e-25
05_03_0514 - 14921653-14921760,14921992-14922054,14922162-149223... 56 5e-08
01_04_0132 + 16469922-16470145,16472720-16472793,16473613-164737... 33 0.40
02_01_0454 + 3263666-3265375 32 0.53
08_02_1004 - 23461798-23462024,23462340-23462415,23463479-234636... 30 2.1
02_01_0336 + 2397648-2397812,2398367-2398441,2398860-2398975,239... 29 3.7
04_01_0451 + 5845249-5846133,5846220-5846509,5855590-5856060,585... 29 4.9
03_02_0650 + 10174905-10175000,10175321-10175376,10175467-101755... 29 6.5
05_03_0498 - 14720989-14722119,14722225-14722839 28 8.6
03_02_0293 - 7166470-7167618 28 8.6
>03_06_0220 +
32452831-32452944,32453618-32453911,32454416-32454503,
32454596-32454717,32454985-32455142,32455201-32455273,
32455552-32455640,32455753-32455858,32455967-32456179,
32456726-32456920,32457051-32457128,32457209-32457523
Length = 614
Score = 127 bits (306), Expect = 1e-29
Identities = 62/123 (50%), Positives = 82/123 (66%)
Frame = +2
Query: 398 ILEALSATGLRSIRYAKEIPYASNIIANDLSEQAVETIKHNIEHNQVSHIIETSHDDACM 577
+LEAL+A+GLRSIRYA+EI ++A D+ + +E K NI+ N S + +
Sbjct: 134 VLEALAASGLRSIRYAREIDVLEKVVALDIDKACIEACKRNIKFNGASAMSKIEPHLTDA 193
Query: 578 LMYKHKHPSKRFAAIDLDPYGCPSIFLDSAVQSIQDGGLLLVTATDMAVLAGNSPETCYC 757
+Y HP K F +D+DPYG PSIFLDSAVQ++ DGGLL+ TATDMAVL G + E C+
Sbjct: 194 RVYMLTHP-KEFDVVDIDPYGAPSIFLDSAVQAVADGGLLMCTATDMAVLCGPNGEVCHS 252
Query: 758 KYG 766
KYG
Sbjct: 253 KYG 255
Score = 53.6 bits (123), Expect = 2e-07
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Frame = +2
Query: 167 ISNLKTIKEGQAEICLTTE----KVFYNPVQEFNRDLSIAVLTLFIEDYKAEKLARFEKK 334
+ + + ++EG+AEI + + +VFYNPVQ NRD+S+A+L FI + E A +K+
Sbjct: 8 LKDYEIVREGEAEIIINKKIAANEVFYNPVQVHNRDMSVALLRTFIAKREEEHKAMMDKR 67
Query: 335 QKKLETV-QDEESGGNPE 385
K V Q + SG N E
Sbjct: 68 DKAHNKVSQSKSSGPNGE 85
>10_06_0078 +
10416950-10417174,10417595-10417679,10417782-10417900,
10418200-10418287,10419400-10419452,10419876-10420015,
10420094-10420166,10420243-10420311,10420632-10420844,
10422304-10422498,10422581-10422658,10423456-10423590
Length = 490
Score = 113 bits (271), Expect = 2e-25
Identities = 88/216 (40%), Positives = 114/216 (52%), Gaps = 16/216 (7%)
Frame = +2
Query: 182 TIKEGQAEICLT-TEKVFYNPVQEFNRDLSIAVLTLFIEDYKAEKLARFEK-KQKKLETV 355
TI+EG+AEI + VFYN Q NRDLSIAVL FI + E + + +L
Sbjct: 53 TIREGRAEIFADDSNSVFYNKAQVNNRDLSIAVLRSFISRRREEHDIQLRRGSHAELPPK 112
Query: 356 QD-EESG---GNPEPKIT----------ILEALSATGLRSIRYAKEIPYASNIIANDLSE 493
EE G G+ E K +LEAL+A+GLR+IRYA E+ +IA D +E
Sbjct: 113 HHAEELGHIRGSSEDKALSEEISYRAPKVLEALAASGLRAIRYALEVDGIGEVIAVDNNE 172
Query: 494 QAVETIKHNIEHNQVSHIIETSHDDACMLMYKHKHPSKRFAAIDLDPYGCPSIFLDSAVQ 673
+N +H I YK K +DLDPYG P+ FLDSAVQ
Sbjct: 173 --------GNNYNLATHTI-----------YK-----KLVFKVDLDPYGSPAAFLDSAVQ 208
Query: 674 SIQDGGLLLVTATDMAVLAGNSPETCYCKYGAVSLK 781
+ DGG+L+ +ATDMAVLAG + E C+ KYG+ LK
Sbjct: 209 CVADGGILMCSATDMAVLAGGNAEVCFSKYGSYPLK 244
>05_03_0514 -
14921653-14921760,14921992-14922054,14922162-14922365,
14923318-14923369,14924099-14924706
Length = 344
Score = 55.6 bits (128), Expect = 5e-08
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Frame = +2
Query: 380 PEPKITILEALSATGLRSIRYAKEIPYASNIIANDLSEQAVETIKHNIEHNQVS--HIIE 553
P L+A+ G+R++RY ++ A + AND SE I N+ + +
Sbjct: 80 PSAPFLCLDAMCGCGVRALRYLAQVG-ADFVWANDASEALRPVIVGNLSRFERAPDRRWA 138
Query: 554 TSHDDACMLMYKHKHPSKRFAAIDLDPYGCPSIFLDSAVQSIQDGGLLLVTATDMAVLAG 733
SH DA L+ + + F ID+D +G + ++ +A+ +++ GGLL +T+TD G
Sbjct: 139 VSHLDATRLLSERYLRREYFDVIDVDSFGGDAAYIRAALLALRIGGLLYLTSTDWRSARG 198
Query: 734 NSPETCYCKYGA 769
+ YGA
Sbjct: 199 YGSRSSLSSYGA 210
>01_04_0132 +
16469922-16470145,16472720-16472793,16473613-16473755,
16474076-16474187,16475235-16475350,16475448-16475594
Length = 271
Score = 32.7 bits (71), Expect = 0.40
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +2
Query: 398 ILEALSATGLRSIRYAKEIPYASNIIANDLSEQAVETIKHNIEHNQVSHIIETSHDDA 571
+ + S G +I A+++ Y + ANDL+ AVE ++ NI N++ IE + DA
Sbjct: 99 VCDVFSGVGPIAISAARKVKY---VYANDLNPTAVEYLERNIVLNKLERKIEVFNMDA 153
>02_01_0454 + 3263666-3265375
Length = 569
Score = 32.3 bits (70), Expect = 0.53
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 122 NKCFYINNIFMRMETISNLKTIKEGQAEIC-LTTEKVFYNPVQEFNRDLSIAVLTLFIE 295
NK FYIN++F+R+ I +L K+ I L +E + Y + + D SI +L F+E
Sbjct: 140 NKRFYINDLFLRVR-IGDLAQRKQALVTIGELLSEDIEYVKIVALDIDNSITLLISFLE 197
>08_02_1004 -
23461798-23462024,23462340-23462415,23463479-23463610,
23463927-23464004,23464919-23465320
Length = 304
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 446 KEIPYASNIIANDLSEQAVETIKHNIEHNQVSHIIETSHDDACMLMYKHKHPSK 607
++IP + + LSE+ V + + +E +Q II SH +Y+H P K
Sbjct: 201 RQIPGGGESL-DQLSERCVSCLYNIVEKHQGERIILVSHGGTIRELYRHASPMK 253
>02_01_0336 +
2397648-2397812,2398367-2398441,2398860-2398975,
2399155-2399269,2399360-2399488,2399809-2399856,
2400369-2400448,2400628-2400824,2400916-2401202,
2401281-2401307,2401353-2401538,2401633-2402094,
2402201-2402350,2402612-2402687,2402851-2402978,
2403244-2403435,2403559-2403690,2403767-2403889,
2404128-2404346,2404518-2404679
Length = 1022
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Frame = +2
Query: 341 KLETVQD--EESGGNPEPKITILEALSATGLRSIRYAKEIPYASNIIAN--DLSEQAVET 508
KL+ V+D EE+ G+PE L++LSA L + + + AS I+ N DL + ++T
Sbjct: 759 KLQAVKDCSEETYGSPEDDNNALKSLSAVELTQSQSRESM--ASTIMNNIRDLPDSELQT 816
Query: 509 IKHNI 523
I+ +
Sbjct: 817 IRSQL 821
>04_01_0451 +
5845249-5846133,5846220-5846509,5855590-5856060,
5856898-5857063,5857100-5857498,5858031-5858075
Length = 751
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +2
Query: 470 IIANDLSEQAVETIKHNIEHNQVSHIIETSHDDACMLMYKHKHPSKRFAAIDLDP 634
++++ QAVE + Q+ ++E +HD++ + + K F ID DP
Sbjct: 500 VVSDSKKAQAVELRMSGLRPFQIMEVMENNHDESEEVGFVMKDLYNFFTRIDADP 554
>03_02_0650 +
10174905-10175000,10175321-10175376,10175467-10175540,
10176215-10176753,10176845-10177186,10177520-10177879,
10177982-10178193,10178881-10179169,10179469-10180152
Length = 883
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/87 (25%), Positives = 39/87 (44%)
Frame = +2
Query: 263 LSIAVLTLFIEDYKAEKLARFEKKQKKLETVQDEESGGNPEPKITILEALSATGLRSIRY 442
+S+ L I++ K L FEKK KKL + Q ++ +PK + L+A+ I
Sbjct: 405 ISVKDLRSGIKELK-NLLENFEKKNKKLASNQAKKPAHTDQPKENKIPLLTASNFEEICG 463
Query: 443 AKEIPYASNIIANDLSEQAVETIKHNI 523
K I + +++ +E + I
Sbjct: 464 EKTSVCILGIFKSSKAKENLEAVLSEI 490
>05_03_0498 - 14720989-14722119,14722225-14722839
Length = 581
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 729 AKTAISVAVTSSKPPS*MLCTAESRNIEGHP*GSRSMAAKRFEG 598
++T +S V PP+ ML + E P GSR + A R +G
Sbjct: 36 SRTTLSAHVEKDDPPAAMLPAVDDGGREHRPSGSRYVLAARRDG 79
>03_02_0293 - 7166470-7167618
Length = 382
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 738 EFPAKTAISVAVTSSKPPS*MLCTAESRNIEGHP 637
+ P+ T SVA +S+PP+ L AE E HP
Sbjct: 267 DVPSTTFSSVAAATSQPPAWQLVNAEHLFQEDHP 300
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,597,782
Number of Sequences: 37544
Number of extensions: 341738
Number of successful extensions: 867
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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