Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_I16
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0072 + 13218669-13218706,13218715-13218781,13220400-132204...    31   1.6  
07_03_1367 + 26072270-26072374,26074047-26074724                       29   4.9  
07_01_0364 + 2710650-2711228                                           29   4.9  
06_02_0233 + 13315579-13316046                                         28   8.5  

>12_02_0072 +
           13218669-13218706,13218715-13218781,13220400-13220471,
           13222107-13222182,13222309-13222943
          Length = 295

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -3

Query: 515 PPPLRQRIHGLHPQFRCLE-LSRYHRP*PP 429
           P P+   +H L PQ+  +E +++YHRP PP
Sbjct: 236 PMPMPMPLHHLPPQYFNMEYMNQYHRPPPP 265


>07_03_1367 + 26072270-26072374,26074047-26074724
          Length = 260

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 542 SYHPCWLRCPPPLRQRIHGLHPQFRCL 462
           S H C ++ PPP    IHGL P +  L
Sbjct: 42  STHKCLVKPPPPSHFTIHGLWPSYNKL 68


>07_01_0364 + 2710650-2711228
          Length = 192

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = -3

Query: 728 LWPEATVLCFXRRLPSRSPLAPYPPQISPVVFLSLFHLLIHPNFHRPSLCF 576
           ++ E   + + + LP R    P  P+ +P++ L + HLL+ P      LC+
Sbjct: 5   VFAELATIHYQKSLPCRHSFDP--PRTTPILHLYIIHLLLPPLIAIVCLCY 53


>06_02_0233 + 13315579-13316046
          Length = 155

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = +3

Query: 657 RIRSERRARWE-APTEAQHRRFRP 725
           R+ +ERR+RW+  P   + RR+RP
Sbjct: 81  RLSAERRSRWQRRPARRERRRWRP 104


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,807,045
Number of Sequences: 37544
Number of extensions: 373485
Number of successful extensions: 1007
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)