Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_I12
(871 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111023-1|AAI11024.1| 269|Homo sapiens surfeit 4 protein. 228 2e-59
BC018741-1|AAH18741.1| 269|Homo sapiens surfeit 4 protein. 228 2e-59
AL158826-15|CAI12840.1| 269|Homo sapiens surfeit 4 protein. 228 2e-59
Y14820-1|CAA75099.1| 254|Homo sapiens surface 4 integral membra... 225 2e-58
AL158826-16|CAI12841.1| 186|Homo sapiens surfeit 4 protein. 205 1e-52
AL158826-14|CAI12839.1| 188|Homo sapiens surfeit 4 protein. 173 9e-43
AM080251-1|CAL04397.1| 101|Homo sapiens immunoglobulin heavy ch... 35 0.33
AF471286-1|AAQ05461.1| 126|Homo sapiens Ig heavy chain variable... 33 1.3
AJ519258-1|CAD60319.1| 119|Homo sapiens immunoglobulin heavy ch... 33 1.8
AM079605-1|CAL03751.1| 101|Homo sapiens immunoglobulin heavy ch... 32 2.3
U27189-1|AAA86893.1| 123|Homo sapiens Ig heavy chain protein. 32 3.1
AF471335-1|AAQ05510.1| 116|Homo sapiens Ig heavy chain variable... 32 3.1
AM083007-1|CAL07153.1| 100|Homo sapiens immunoglobulin heavy ch... 31 4.1
AF471353-1|AAQ05528.1| 124|Homo sapiens Ig heavy chain variable... 31 4.1
U00511-1|AAA17923.1| 116|Homo sapiens immunoglobulin heavy chai... 31 5.4
AY003757-1|AAK18723.1| 108|Homo sapiens immunoglobulin alpha he... 31 5.4
AY003724-1|AAF85724.1| 107|Homo sapiens immunoglobulin alpha he... 31 5.4
AM083257-1|CAL07403.1| 101|Homo sapiens immunoglobulin heavy ch... 31 5.4
AM081976-1|CAL06122.1| 101|Homo sapiens immunoglobulin heavy ch... 31 5.4
AM081698-1|CAL05844.1| 101|Homo sapiens immunoglobulin heavy ch... 31 5.4
AM080594-1|CAL04740.1| 101|Homo sapiens immunoglobulin heavy ch... 31 5.4
AM080329-1|CAL04475.1| 101|Homo sapiens immunoglobulin heavy ch... 31 5.4
AM080025-1|CAL04171.1| 101|Homo sapiens immunoglobulin heavy ch... 31 5.4
AM079906-1|CAL04052.1| 100|Homo sapiens immunoglobulin heavy ch... 31 5.4
DQ926143-1|ABI50596.1| 121|Homo sapiens immunoglobulin heavy ch... 31 7.2
AM083097-1|CAL07243.1| 102|Homo sapiens immunoglobulin heavy ch... 31 7.2
AM082560-1|CAL06706.1| 101|Homo sapiens immunoglobulin heavy ch... 31 7.2
AM082059-1|CAL06205.1| 100|Homo sapiens immunoglobulin heavy ch... 31 7.2
AM081299-1|CAL05445.1| 100|Homo sapiens immunoglobulin heavy ch... 31 7.2
AM081290-1|CAL05436.1| 101|Homo sapiens immunoglobulin heavy ch... 31 7.2
AM079182-1|CAL03328.1| 101|Homo sapiens immunoglobulin heavy ch... 31 7.2
AM079007-1|CAL03153.1| 101|Homo sapiens immunoglobulin heavy ch... 31 7.2
AF471514-1|AAQ05689.1| 122|Homo sapiens Ig heavy chain variable... 31 7.2
DQ065723-1|ABA00133.1| 125|Homo sapiens immunoglobulin epsilon ... 30 9.5
DQ065713-1|ABA00123.1| 125|Homo sapiens immunoglobulin epsilon ... 30 9.5
AM082976-1|CAL07122.1| 101|Homo sapiens immunoglobulin heavy ch... 30 9.5
AM081718-1|CAL05864.1| 101|Homo sapiens immunoglobulin heavy ch... 30 9.5
AM081504-1|CAL05650.1| 101|Homo sapiens immunoglobulin heavy ch... 30 9.5
AM081262-1|CAL05408.1| 100|Homo sapiens immunoglobulin heavy ch... 30 9.5
AM081091-1|CAL05237.1| 101|Homo sapiens immunoglobulin heavy ch... 30 9.5
AM079788-1|CAL03934.1| 101|Homo sapiens immunoglobulin heavy ch... 30 9.5
AK127385-1|BAC86952.1| 176|Homo sapiens protein ( Homo sapiens ... 30 9.5
AF471381-1|AAQ05556.1| 123|Homo sapiens Ig heavy chain variable... 30 9.5
>BC111023-1|AAI11024.1| 269|Homo sapiens surfeit 4 protein.
Length = 269
Score = 228 bits (558), Expect = 2e-59
Identities = 107/197 (54%), Positives = 135/197 (68%)
Frame = +1
Query: 151 NEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDMSWGCGK 330
N+ + TAED ADQ +R K LP VARLCLISTFLEDG+RMWFQWSEQRDY+D +W CG
Sbjct: 4 NDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCGY 63
Query: 331 FLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXXXXXXX 510
LA+ FV +NL GQL GCV+VL R V AC LF I+ LQT AYSILWD++F
Sbjct: 64 LLASSFVFLNLLGQLTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRNLAL 123
Query: 511 XXXXXXXXXXXXXXXXSLFAGVPSLGENKPKTYLQLAGRILLAFMFITLLRFEISFLQII 690
S+FAGVP++ E+ PK Y+QL GR+LL MF+TLL F+ SF I+
Sbjct: 124 GGGLLLLLAESRSEGKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDASFFSIV 183
Query: 691 QDLLGSILMILVTVGYR 741
Q+++G+ LMILV +G++
Sbjct: 184 QNIVGTALMILVAIGFK 200
Score = 50.4 bits (115), Expect = 8e-06
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +2
Query: 794 YHNAWWAVPSYKPLRDFLKYDFFQTL 871
Y NA+W +P YKP+ DFLKYDFFQT+
Sbjct: 218 YFNAFWTIPVYKPMHDFLKYDFFQTM 243
>BC018741-1|AAH18741.1| 269|Homo sapiens surfeit 4 protein.
Length = 269
Score = 228 bits (558), Expect = 2e-59
Identities = 107/197 (54%), Positives = 135/197 (68%)
Frame = +1
Query: 151 NEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDMSWGCGK 330
N+ + TAED ADQ +R K LP VARLCLISTFLEDG+RMWFQWSEQRDY+D +W CG
Sbjct: 4 NDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCGY 63
Query: 331 FLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXXXXXXX 510
LA+ FV +NL GQL GCV+VL R V AC LF I+ LQT AYSILWD++F
Sbjct: 64 LLASSFVFLNLLGQLTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRNLAL 123
Query: 511 XXXXXXXXXXXXXXXXSLFAGVPSLGENKPKTYLQLAGRILLAFMFITLLRFEISFLQII 690
S+FAGVP++ E+ PK Y+QL GR+LL MF+TLL F+ SF I+
Sbjct: 124 GGGLLLLLAESRSEGKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDASFFSIV 183
Query: 691 QDLLGSILMILVTVGYR 741
Q+++G+ LMILV +G++
Sbjct: 184 QNIVGTALMILVAIGFK 200
Score = 50.4 bits (115), Expect = 8e-06
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +2
Query: 794 YHNAWWAVPSYKPLRDFLKYDFFQTL 871
Y NA+W +P YKP+ DFLKYDFFQT+
Sbjct: 218 YFNAFWTIPVYKPMHDFLKYDFFQTM 243
>AL158826-15|CAI12840.1| 269|Homo sapiens surfeit 4 protein.
Length = 269
Score = 228 bits (558), Expect = 2e-59
Identities = 107/197 (54%), Positives = 135/197 (68%)
Frame = +1
Query: 151 NEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDMSWGCGK 330
N+ + TAED ADQ +R K LP VARLCLISTFLEDG+RMWFQWSEQRDY+D +W CG
Sbjct: 4 NDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCGY 63
Query: 331 FLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXXXXXXX 510
LA+ FV +NL GQL GCV+VL R V AC LF I+ LQT AYSILWD++F
Sbjct: 64 LLASSFVFLNLLGQLTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRNLAL 123
Query: 511 XXXXXXXXXXXXXXXXSLFAGVPSLGENKPKTYLQLAGRILLAFMFITLLRFEISFLQII 690
S+FAGVP++ E+ PK Y+QL GR+LL MF+TLL F+ SF I+
Sbjct: 124 GGGLLLLLAESRSEGKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDASFFSIV 183
Query: 691 QDLLGSILMILVTVGYR 741
Q+++G+ LMILV +G++
Sbjct: 184 QNIVGTALMILVAIGFK 200
Score = 50.4 bits (115), Expect = 8e-06
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +2
Query: 794 YHNAWWAVPSYKPLRDFLKYDFFQTL 871
Y NA+W +P YKP+ DFLKYDFFQT+
Sbjct: 218 YFNAFWTIPVYKPMHDFLKYDFFQTM 243
>Y14820-1|CAA75099.1| 254|Homo sapiens surface 4 integral membrane
protein protein.
Length = 254
Score = 225 bits (550), Expect = 2e-58
Identities = 106/192 (55%), Positives = 132/192 (68%)
Frame = +1
Query: 166 TAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDMSWGCGKFLATM 345
TAED ADQ +R K LP VARLCLISTFLEDG+RMWFQWSEQRDY+D +W CG LA+
Sbjct: 2 TAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCGYLLASS 61
Query: 346 FVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXXXXXXXXXXXX 525
FV +NL GQL GCV+VL R V AC LF I+ LQT AYSILWD++F
Sbjct: 62 FVFLNLLGQLTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRNLALGGGLL 121
Query: 526 XXXXXXXXXXXSLFAGVPSLGENKPKTYLQLAGRILLAFMFITLLRFEISFLQIIQDLLG 705
S+FAGVP++ E+ PK Y+QL GR+LL MF+TLL F+ SF I+Q+++G
Sbjct: 122 LVLAESRSEGKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDASFFSIVQNIVG 181
Query: 706 SILMILVTVGYR 741
+ LMILV +G++
Sbjct: 182 TALMILVAIGFK 193
Score = 50.4 bits (115), Expect = 8e-06
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +2
Query: 794 YHNAWWAVPSYKPLRDFLKYDFFQTL 871
Y NA+W +P YKP+ DFLKYDFFQT+
Sbjct: 211 YFNAFWTIPVYKPMHDFLKYDFFQTM 236
>AL158826-16|CAI12841.1| 186|Homo sapiens surfeit 4 protein.
Length = 186
Score = 205 bits (501), Expect = 1e-52
Identities = 98/176 (55%), Positives = 118/176 (67%)
Frame = +1
Query: 151 NEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDMSWGCGK 330
N+ + TAED ADQ +R K LP VARLCLISTFLEDG+RMWFQWSEQRDY+D +W CG
Sbjct: 4 NDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCGY 63
Query: 331 FLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXXXXXXX 510
LA+ FV +NL GQL GCV+VL R V AC LF I+ LQT AYSILWD++F
Sbjct: 64 LLASSFVFLNLLGQLTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRNLAL 123
Query: 511 XXXXXXXXXXXXXXXXSLFAGVPSLGENKPKTYLQLAGRILLAFMFITLLRFEISF 678
S+FAGVP++ E+ PK Y+QL GR+LL MF+TLL F+ SF
Sbjct: 124 GGGLLLLLAESRSEGKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDASF 179
>AL158826-14|CAI12839.1| 188|Homo sapiens surfeit 4 protein.
Length = 188
Score = 173 bits (420), Expect = 9e-43
Identities = 83/151 (54%), Positives = 99/151 (65%)
Frame = +1
Query: 151 NEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDMSWGCGK 330
N+ + TAED ADQ +R K LP VARLCLISTFLEDG+RMWFQWSEQRDY+D +W CG
Sbjct: 4 NDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCGY 63
Query: 331 FLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXXXXXXX 510
LA+ FV +NL GQL GCV+VL R V AC LF I+ LQT AYSILWD++F
Sbjct: 64 LLASSFVFLNLLGQLTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRNLAL 123
Query: 511 XXXXXXXXXXXXXXXXSLFAGVPSLGENKPK 603
S+FAGVP++ E+ PK
Sbjct: 124 GGGLLLLLAESRSEGKSMFAGVPTMRESSPK 154
>AM080251-1|CAL04397.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 35.1 bits (77), Expect = 0.33
Identities = 24/74 (32%), Positives = 33/74 (44%)
Frame = +3
Query: 390 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 569
G Q G LR + S T T R P G++ + G GGGP+ A SV+
Sbjct: 11 GGGLVQPGGSLRLSCAASGFTFSSYAMTWVRQAPGK--GLEWVSIIGAGGGPTYYADSVK 68
Query: 570 GRAVARREQTEDVL 611
GR R+ ++D L
Sbjct: 69 GRFTISRDNSKDTL 82
>AF471286-1|AAQ05461.1| 126|Homo sapiens Ig heavy chain variable
region, VH3 family protein.
Length = 126
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 468 YTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVRGRAVARREQTEDVL 611
Y M +P G++ A GGG S A SV+GR R+ +E++L
Sbjct: 32 YAMNWVRQAPGKGLEWVAVISAGGGNSYYADSVKGRFTISRDNSENIL 79
>AJ519258-1|CAD60319.1| 119|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 119
Score = 32.7 bits (71), Expect = 1.8
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = +3
Query: 390 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 569
G Q G LR + S T + Y M +P G++ +T G GGG + A SV+
Sbjct: 12 GGGLVQPGGSLRLSCAASGFTFSK--YAMDWVRQAPGKGLEWVSTFGAGGGSTYYADSVK 69
Query: 570 GRAVARREQTEDVL 611
GR R+ +++ L
Sbjct: 70 GRFTISRDNSKNTL 83
>AM079605-1|CAL03751.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 468 YTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVRGRAVARREQTEDVLATRRS 626
Y M +P G++ +++ G GG S A SV+GRA R+ +++ L + S
Sbjct: 35 YVMSWVRQAPGRGLEWASSIGGSGGNSHYADSVKGRATISRDNSKNTLYLQMS 87
>U27189-1|AAA86893.1| 123|Homo sapiens Ig heavy chain protein.
Length = 123
Score = 31.9 bits (69), Expect = 3.1
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = +3
Query: 390 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 569
G Q G LR + S T I Y MG +P G++ + GG S A SV+
Sbjct: 8 GGGLVQPGGSLRLSCAASGFTFIN--YAMGWVRQAPGEGLEWVSGISGSGGTSHSADSVK 65
Query: 570 GRAVARREQTEDVLA 614
GR RE +++ L+
Sbjct: 66 GRFTISRENSKNTLS 80
>AF471335-1|AAQ05510.1| 116|Homo sapiens Ig heavy chain variable
region, VH3 family protein.
Length = 116
Score = 31.9 bits (69), Expect = 3.1
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +3
Query: 390 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 569
G Q G LR + + S T T R P G++ A+ G GGP+ A SV+
Sbjct: 8 GGDLVQPGGSLRLSCVASGFTFRTYVVTWVRQAPGK--GLEWVASIGATGGPTYYADSVK 65
Query: 570 GRAVARREQTEDVL 611
GR R+ +++ L
Sbjct: 66 GRFTISRDNSKNTL 79
>AM083007-1|CAL07153.1| 100|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 100
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 468 YTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVRGRAVARREQTEDVLATR 620
Y M +P G++ + G GGP+ A SV+GR R+++++ L T+
Sbjct: 35 YVMSWVRQAPGKGLEWVSPFGGSGGPTYHADSVKGRFSISRDKSKNTLYTQ 85
>AF471353-1|AAQ05528.1| 124|Homo sapiens Ig heavy chain variable
region, VH3 family protein.
Length = 124
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +3
Query: 390 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 569
G Q G LR + S T + R P G+D +T G GGG + A SV+
Sbjct: 8 GGGLVQPGGSLRLSCAASGFTFSNCAMSWVRQAPGQ--GLDWVSTIGHGGGDTYYADSVK 65
Query: 570 GRAVARREQTEDVL 611
GR R+ +++ L
Sbjct: 66 GRFTISRDNSKNTL 79
>U00511-1|AAA17923.1| 116|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 116
Score = 31.1 bits (67), Expect = 5.4
Identities = 24/74 (32%), Positives = 36/74 (48%)
Frame = +3
Query: 390 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 569
G Q G LR + + S IT +TM SP G++ +T VGG S A +V+
Sbjct: 8 GGGLIQPGGSLRLSCVASGITFS--SHTMNWVRQSPGKGLEWISTIYVGGTSSYYADAVK 65
Query: 570 GRAVARREQTEDVL 611
GR R+ +++ L
Sbjct: 66 GRFTVSRDNSKNTL 79
>AY003757-1|AAK18723.1| 108|Homo sapiens immunoglobulin alpha heavy
chain variable region protein.
Length = 108
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 468 YTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVRGRAVARREQTEDVL 611
Y M +P G++ ++ GVGGG + A SV+GR R+ ++ L
Sbjct: 4 YAMTWVRQAPGKGLEWVSSIGVGGGNTYYADSVKGRFTISRDNSKSTL 51
>AY003724-1|AAF85724.1| 107|Homo sapiens immunoglobulin alpha heavy
chain variable region protein.
Length = 107
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 468 YTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVRGRAVARREQTEDVL 611
Y M +P G++ ++ GVGGG + A SV+GR R+ ++ L
Sbjct: 3 YAMTWVRQAPGKGLEWVSSIGVGGGNTYYADSVKGRFTISRDNSKSTL 50
>AM083257-1|CAL07403.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 31.1 bits (67), Expect = 5.4
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +3
Query: 390 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 569
G Q G LR + S T Y M +P G++ +T GGG + A SV+
Sbjct: 11 GGGLVQPGGSLRLSCAASAFTFSN--YAMNWVRQAPGKGLEWVSTVSSGGGSTYYADSVK 68
Query: 570 GRAVARREQTEDVL 611
GR R+ +++ L
Sbjct: 69 GRFTISRDNSKNTL 82
>AM081976-1|CAL06122.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 31.1 bits (67), Expect = 5.4
Identities = 24/80 (30%), Positives = 35/80 (43%)
Frame = +3
Query: 372 IRRMCYGARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS* 551
+R + G Q G LR + S T R Y M +P G++ +T GG +
Sbjct: 5 VRLLESGGGMVQPGGSLRLSCAASGFTFSR--YAMSWVRQAPGKGLEWVSTVSTGGDKTY 62
Query: 552 RAQSVRGRAVARREQTEDVL 611
A SV+GR R+ + D L
Sbjct: 63 YAGSVKGRFTISRDNSMDTL 82
>AM081698-1|CAL05844.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 31.1 bits (67), Expect = 5.4
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +3
Query: 390 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 569
G QSG LR + S T T R P G++ ++ GGG + A SV+
Sbjct: 11 GGGLVQSGGSLRLSCAASRFTFTTTAMTWVRQAPGK--GLEWVSSINAGGGATYYADSVK 68
Query: 570 GRAVARREQTEDVL 611
GR R+ +++ L
Sbjct: 69 GRFTISRDNSKNTL 82
>AM080594-1|CAL04740.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 31.1 bits (67), Expect = 5.4
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = +3
Query: 390 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 569
G Q G LR + S +T R Y M +P G++ +T GG + A SV+
Sbjct: 11 GGGLVQPGGSLRLSCAASGLTFSR--YAMSWVRQAPGKGLEWVSTISAAGGDTCYADSVK 68
Query: 570 GRAVARREQTEDVL 611
GR R+ +++ L
Sbjct: 69 GRFTISRDNSQNTL 82
>AM080329-1|CAL04475.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 31.1 bits (67), Expect = 5.4
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +3
Query: 390 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 569
G Q G LR + S +T R Y M +P G++ + G GG + A SV+
Sbjct: 11 GGGLVQPGGSLRLSCAASGLT-FR-NYAMSWVRQAPGKGLEWVSVIGASGGSAYYADSVK 68
Query: 570 GRAVARREQTEDVL 611
GR R+ + D L
Sbjct: 69 GRFTISRDNSRDTL 82
>AM080025-1|CAL04171.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 468 YTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVRGRAVARREQTEDVL 611
YTMG +P G+D ++ GG + A SV+GR R+ +++ L
Sbjct: 35 YTMGWVRQAPGKGLDWVSSTSGNGGTTYYADSVKGRFTISRDTSKNTL 82
>AM079906-1|CAL04052.1| 100|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 100
Score = 31.1 bits (67), Expect = 5.4
Identities = 23/74 (31%), Positives = 32/74 (43%)
Frame = +3
Query: 390 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 569
G Q G LR + S T Y M +P G++ +T GGP+ A SVR
Sbjct: 11 GGNLVQPGGSLRLSCAASGFTFS--SYAMSWVRQAPGKGLEWVSTISDSGGPTYYADSVR 68
Query: 570 GRAVARREQTEDVL 611
GR R+ + + L
Sbjct: 69 GRFTISRDTSRNTL 82
>DQ926143-1|ABI50596.1| 121|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 121
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 468 YTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVRGRAVARREQTEDVL 611
YTM +P G++ + GGG S A SV+GR R+ +++ L
Sbjct: 32 YTMNWVRQAPGRGLEWLSVTSGGGGTSFYADSVKGRFTISRDNSKNTL 79
>AM083097-1|CAL07243.1| 102|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 102
Score = 30.7 bits (66), Expect = 7.2
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +3
Query: 369 SIRRMCYGARKA--QSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGG 542
S+R C+ R+A G LR + S T R Y M +P G++ + GG
Sbjct: 3 SVRCSCWSLREAWYSRGGSLRLSCAASGFTFRR--YAMSWVRQAPGKGLEWVSGISGSGG 60
Query: 543 PS*RAQSVRGRAVARREQTEDVL 611
+ A SV+GR R+ +E+ L
Sbjct: 61 TTNYADSVKGRLTISRDSSENTL 83
>AM082560-1|CAL06706.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 30.7 bits (66), Expect = 7.2
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 468 YTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVRGRAVARREQTEDVL 611
Y M +P G++ +T GGG + A SV+GR R+ +++ L
Sbjct: 35 YAMSWVRQAPGKGLEWVSTVSAGGGTAYYADSVKGRFTISRDNSKNTL 82
>AM082059-1|CAL06205.1| 100|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 100
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 468 YTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVRGRAVARREQTEDVL 611
YTM +P G++ +T G GG + A SV+GR R+ +++ L
Sbjct: 35 YTMSWVRQAPGRGLEWVSTIGNSGGRTYYADSVKGRFTISRDNSKNTL 82
>AM081299-1|CAL05445.1| 100|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 100
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 468 YTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVRGRAVARREQTEDVL 611
Y M +P G++ +T GGG + A SV+GR R+ +E+ L
Sbjct: 35 YAMSWVRQAPGKGLEWVSTISGGGGSTYYADSVKGRFTISRDNSENTL 82
>AM081290-1|CAL05436.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 30.7 bits (66), Expect = 7.2
Identities = 24/74 (32%), Positives = 34/74 (45%)
Frame = +3
Query: 390 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 569
G Q G LR + S T R Y M +P G+D +T GGG + A SV+
Sbjct: 11 GGGLVQPGGSLRLSCAASGFT-FR-NYAMSWVRQAPGKGLDWVSTVSGGGGSTYYADSVK 68
Query: 570 GRAVARREQTEDVL 611
GR R+ +++ L
Sbjct: 69 GRFSISRDNSKNTL 82
>AM079182-1|CAL03328.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 30.7 bits (66), Expect = 7.2
Identities = 23/75 (30%), Positives = 33/75 (44%)
Frame = +3
Query: 390 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 569
G R Q G LR + S T T R P G++ +T GG + A SVR
Sbjct: 11 GGRLVQPGGSLRLSCAASGFTFSNYAMTWVRQAPGK--GLEWVSTISGSGGRTYYADSVR 68
Query: 570 GRAVARREQTEDVLA 614
GR R+ +++ L+
Sbjct: 69 GRFTISRDSSKNTLS 83
>AM079007-1|CAL03153.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 30.7 bits (66), Expect = 7.2
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +3
Query: 390 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDR-SATAGVGGGPS*RAQSV 566
G Q G LR + S T I Y M +P G++ S +G GGG + A SV
Sbjct: 11 GGALVQPGGSLRLSCAASGFTFIN--YAMNWVRQAPGKGLEWVSGISGGGGGSTSYADSV 68
Query: 567 RGRAVARREQTEDVLATR 620
+GR R+ + + L R
Sbjct: 69 KGRFTVSRDSSTNTLYLR 86
>AF471514-1|AAQ05689.1| 122|Homo sapiens Ig heavy chain variable
region, VH3 family protein.
Length = 122
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 468 YTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVRGRAVARREQTEDVLATRRS--HPAGL 641
Y M +P G++ + G GG + A SV+GR + R+ +++ L + S P
Sbjct: 32 YAMYWVRQAPGKGLEPVSVIGTSGGFTKYADSVKGRFITSRDNSKNTLYLQMSSLRPEDT 91
Query: 642 HVHHALKI 665
+++ +KI
Sbjct: 92 AIYYCVKI 99
>DQ065723-1|ABA00133.1| 125|Homo sapiens immunoglobulin epsilon
heavy chain variable region protein.
Length = 125
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 468 YTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVRGRAVARREQTEDVL 611
Y M +P G++ +T V GG + A SVRGR R+ +E+ L
Sbjct: 32 YAMTWVRQAPGRGLEWVSTISVTGGRTYYADSVRGRFTISRDNSENTL 79
>DQ065713-1|ABA00123.1| 125|Homo sapiens immunoglobulin epsilon
heavy chain variable region protein.
Length = 125
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 468 YTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVRGRAVARREQTEDVL 611
Y M +P G++ +T V GG + A SVRGR R+ +E+ L
Sbjct: 32 YAMTWVRQAPGRGLEWVSTISVTGGRTYYADSVRGRFTISRDNSENTL 79
>AM082976-1|CAL07122.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 468 YTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVRGRAVARREQTEDVLATRRS 626
YTM P G++ + G GGG A SV+GR R+ +++ L + S
Sbjct: 35 YTMNWVRQGPGKGLEWVSKIGGGGGSMSYADSVKGRFTISRDNSKNTLYLQMS 87
>AM081718-1|CAL05864.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 30.3 bits (65), Expect = 9.5
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = +3
Query: 372 IRRMCYGARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS* 551
+R + G Q G LR + S T R Y M +P G++ + GGG +
Sbjct: 5 VRLLESGGGLVQPGGSLRVSCAASGFT-FR-HYAMSWVRQAPGKGLEWVSGISAGGGSTY 62
Query: 552 RAQSVRGRAVARREQTEDVL 611
A SV+GR R+ +E+ +
Sbjct: 63 HADSVKGRCTISRDNSENTV 82
>AM081504-1|CAL05650.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 30.3 bits (65), Expect = 9.5
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 468 YTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVRGRAVARREQTEDVL 611
Y M +P G++ ++ GGG + A SV+GR RE +E+ L
Sbjct: 35 YAMSWVRQAPGKGLEWVSSINGGGGSTFYADSVKGRFTISRENSENTL 82
>AM081262-1|CAL05408.1| 100|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 100
Score = 30.3 bits (65), Expect = 9.5
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +3
Query: 390 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 569
G Q G LR + S IT R Y M +P G++ + GG + A SV+
Sbjct: 11 GGGLVQPGGSLRLSCAVSGITFTR--YAMSWVRQAPGKGLEWVSAVSASGGSTIYADSVK 68
Query: 570 GRAVARREQTEDVL 611
GR R+ +++ L
Sbjct: 69 GRFTVSRDNSKNTL 82
>AM081091-1|CAL05237.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 30.3 bits (65), Expect = 9.5
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +3
Query: 390 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 569
G Q G LR + S T Y M +P G++ + GGGP+ A SV+
Sbjct: 11 GGGSVQPGGSLRLSCAASGFTFSN--YAMSWVRQTPGKGLEWVSAIRGGGGPTYYADSVK 68
Query: 570 GRAVARREQTEDVL 611
GR R+ +++ L
Sbjct: 69 GRFTISRDNSKNTL 82
>AM079788-1|CAL03934.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 30.3 bits (65), Expect = 9.5
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +3
Query: 390 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 569
G Q G LR + S T + M +P+ G++ A G GG A SVR
Sbjct: 11 GGDSVQPGGSLRLSCAASGFTFS--SHAMSWVRQTPEKGLEWVAAIGGSGGAPNYADSVR 68
Query: 570 GRAVARREQTEDVL 611
GR + R+ +++ L
Sbjct: 69 GRFIISRDNSKNTL 82
>AK127385-1|BAC86952.1| 176|Homo sapiens protein ( Homo sapiens
cDNA FLJ45467 fis, clone BRSTN2015699. ).
Length = 176
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 195 TKRQKCLTHCGATVPYIHIP-GGRSPHVVPVVRAERLHGHVLGLRQIPRHNVCDSKFIWS 371
TK ++C +HC HIP G ++ P + G + PR + S+ +W
Sbjct: 50 TKAERCPSHCKQPGTASHIPTGAKAKACEPGAATLQESGSPVHRDSAPRGDATSSR-VWG 108
Query: 372 IRRMCYGARK 401
+R C+G R+
Sbjct: 109 -QRDCWGGRR 117
>AF471381-1|AAQ05556.1| 123|Homo sapiens Ig heavy chain variable
region, VH3 family protein.
Length = 123
Score = 30.3 bits (65), Expect = 9.5
Identities = 24/80 (30%), Positives = 35/80 (43%)
Frame = +3
Query: 390 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 569
G Q G LR A + S T T R P G++ +T GG + A SV+
Sbjct: 8 GGGLGQPGGSLRLACVASGFTFDSYAMTWVRRAPGK--GLEWVSTVTSNGGSTSYADSVK 65
Query: 570 GRAVARREQTEDVLATRRSH 629
GR V R+ ++ L R ++
Sbjct: 66 GRFVISRDNSKSTLYLRMNN 85
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,122,973
Number of Sequences: 237096
Number of extensions: 2874464
Number of successful extensions: 22000
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 21553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21986
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -