Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_I11
(903 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 33 0.28
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 33 0.28
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.37
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.37
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.37
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.37
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 32 0.65
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.85
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 31 0.85
AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying de... 31 1.1
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 2.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.5
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.5
U28731-7|AAA68294.2| 120|Caenorhabditis elegans Hypothetical pr... 29 4.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.5
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 29 4.5
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 29 4.5
AF100305-6|AAC68915.1| 352|Caenorhabditis elegans Hypothetical ... 29 4.5
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 29 6.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 6.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 6.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 6.0
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -3
Query: 574 PPXGGGXXPPPXXKXXXPGSXXGGXXGXPKXXPXXP-PG 461
PP GG PPP PG+ GG P P P PG
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPG 820
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -3
Query: 574 PPXGGGXXPPPXXKXXXPGSXXGGXXGXPKXXPXXP-PG 461
PP GG PPP PG+ GG P P P PG
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPG 820
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.7 bits (71), Expect = 0.37
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -2
Query: 866 PPXLXGEKAXXSSGXXGXGXSGXPXGGXPGGGXGXFXXXGGG 741
PP G G G G G GG GGG G GGG
Sbjct: 114 PPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGG 155
Score = 32.3 bits (70), Expect = 0.49
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -2
Query: 866 PPXLXGEKAXXSSGXXGXGXSGXPXGGXPGGGXGXFXXXGGG 741
PP G G G G G GG GGG G GGG
Sbjct: 57 PPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGG 98
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.37
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 3/50 (6%)
Frame = +3
Query: 735 GXPPPXPXKXP---GSPPWXTPXGXPXXTXPXSPGXXXGLFPXEXGGGXP 875
G PPP P P G PP P G P T P G P GG P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.37
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 3/50 (6%)
Frame = +3
Query: 735 GXPPPXPXKXP---GSPPWXTPXGXPXXTXPXSPGXXXGLFPXEXGGGXP 875
G PPP P P G PP P G P T P G P GG P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.37
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 3/50 (6%)
Frame = +3
Query: 735 GXPPPXPXKXP---GSPPWXTPXGXPXXTXPXSPGXXXGLFPXEXGGGXP 875
G PPP P P G PP P G P T P G P GG P
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 31.9 bits (69), Expect = 0.65
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -2
Query: 833 SSGXXGXGXSGXPXGGXPGGGXGXFXXXGGG 741
SSG G G +G GG GGG G GGG
Sbjct: 785 SSGGGGGGGNGGSGGGGGGGGGGSGGSGGGG 815
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 31.5 bits (68), Expect = 0.85
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -3
Query: 574 PPXGGGXXPPPXXKXXXPGSXXGGXXGXPKXXPXXPP 464
PP GG PPP PG+ GG P P P
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVP 818
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.85
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -2
Query: 866 PPXLXGEKAXXSSGXXGXGXSGXPXGGXPGGGXGXFXXXGGG 741
PP G G G G G GG GGG G GGG
Sbjct: 75 PPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGG 116
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.85
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -2
Query: 866 PPXLXGEKAXXSSGXXGXGXSGXPXGGXPGGGXGXFXXXGGG 741
PP G G G G G GG GGG G GGG
Sbjct: 75 PPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGG 116
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 31.5 bits (68), Expect = 0.85
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -3
Query: 574 PPXGGGXXPPPXXKXXXPGSXXGGXXGXPKXXPXXPP 464
PP GG PPP PG+ GG P P P
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVP 818
>AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying
defective protein 4,isoform a protein.
Length = 780
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -2
Query: 851 GEKAXXSSGXXGXGXSGXPXGGXPGGGXG 765
G + G G G SG GG PGGG G
Sbjct: 4 GSRPSSGGGGGGGGASGGAGGGAPGGGGG 32
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.3 bits (65), Expect = 2.0
Identities = 26/84 (30%), Positives = 28/84 (33%), Gaps = 1/84 (1%)
Frame = -3
Query: 598 PXXLGXXFPPXG-GGXXPPPXXKXXXPGSXXGGXXGXPKXXPXXPPGXQRFFXRGGXPFX 422
P G P G GG PPP PGS G G P PPG + G P
Sbjct: 394 PSAFGAPQGPGGPGGYGPPPPGGPGAPGS-YGPPQGGPGGFGPPPPGGPGAY--GPPPTG 450
Query: 421 XPXXPXXXSPGKXGVKXXSPXXXG 350
P PG G +P G
Sbjct: 451 FPPV-GAPPPGAAGAPGGNPFARG 473
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = -3
Query: 574 PPXGGGXXPPPXXKXXXPGSXXGGXXGXPKXXPXXPPGXQRFFXRGGXPFXXPXXPXXXS 395
PP G PPP P G G P P PP RF G P P
Sbjct: 289 PPPSSGMWPPP---PPPPPGRTPGPPGMPGMPPPPPP--SRFGPPGMGGMPPPPPPGMRY 343
Query: 394 PG 389
PG
Sbjct: 344 PG 345
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 735 GXPPPXPXKXPGSPPWXTPXGXPXXTXPXSPGXXXGLFP 851
G PPP P + P + P P P + P +P G+ P
Sbjct: 346 GMPPPPPPRYPSAGPGMYP--PPPPSRPPAPPSGHGMIP 382
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -2
Query: 851 GEKAXXSSGXXGXGXSGXPXGGXPGGGXGXFXXXGGG 741
G +G G G G GG GGG G GGG
Sbjct: 82 GGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGG 118
>U28731-7|AAA68294.2| 120|Caenorhabditis elegans Hypothetical
protein F12A10.1 protein.
Length = 120
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 802 GFPXGVXQGGXPGXFXGXGGGXP 734
G+P G GG PG + G GGG P
Sbjct: 62 GYPGGYG-GGYPGGYSGYGGGYP 83
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = -3
Query: 574 PPXGGGXXPPPXXKXXXPGSXXGGXXGXPKXXPXXPPGXQRFFXRGGXPFXXPXXPXXXS 395
PP G PPP P G G P P PP RF G P P
Sbjct: 299 PPPSSGMWPPP---PPPPPGRTPGPPGMPGMPPPPPP--SRFGPPGMGGMPPPPPPGMRY 353
Query: 394 PG 389
PG
Sbjct: 354 PG 355
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 735 GXPPPXPXKXPGSPPWXTPXGXPXXTXPXSPGXXXGLFP 851
G PPP P + P + P P P + P +P G+ P
Sbjct: 356 GMPPPPPPRYPSAGPGMYP--PPPPSRPPAPPSGHGMIP 392
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 818 GXGXSGXPXGGXPGGGXGXFXXXGGG 741
G G G GG GGG G F GGG
Sbjct: 54 GGGGGGGGGGGGFGGGNGGFGGGGGG 79
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 818 GXGXSGXPXGGXPGGGXGXFXXXGGG 741
G G G GG GGG G F GGG
Sbjct: 54 GGGGGGGGGGGGFGGGNGGFGGGGGG 79
>AF100305-6|AAC68915.1| 352|Caenorhabditis elegans Hypothetical
protein W04B5.2 protein.
Length = 352
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
Frame = +3
Query: 723 QXFXGXPPPXPXKXPGSPP-WXTPXGXPXXTXPXSPGXXXGLFP---XEXGGGXPXXXXG 890
+ F PPP P K G+ P + P P PG L+P GG P G
Sbjct: 120 EGFRQPPPPPPRKRTGAQPVYPAAANDPGDELPRLPGSLQRLWPTAATRVGGAPPTTSRG 179
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/69 (31%), Positives = 23/69 (33%), Gaps = 3/69 (4%)
Frame = -3
Query: 577 FPPXGGGXXPP--PXXKXXXPG-SXXGGXXGXPKXXPXXPPGXQRFFXRGGXPFXXPXXP 407
F P G G PP P PG G P P P G R F G P P
Sbjct: 224 FIPPGTGGFPPGQPTAGSFPPGPQVPGSYPSGPADIPQGP-GMPRAFPPGASAPVAPGMP 282
Query: 406 XXXSPGKXG 380
PG+ G
Sbjct: 283 GAFPPGQGG 291
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +3
Query: 735 GXPPPXPXKXPGSPPWXTPXGXPXXTXPXSPGXXXGLFPXEXGGGXPXXXXG 890
G PPP P GSPP P P L P + GG P G
Sbjct: 278 GSPPPPPA--GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 327
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Frame = -3
Query: 574 PPXGGGXXPPPXXKXXXPGSXXGGXXGXPKXXPXXPP-GXQRFFXRGGXPFXXPXXPXXX 398
P G G PPP P G P P PP G R G P P P
Sbjct: 248 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP--PPPPPPRG 305
Query: 397 SP 392
SP
Sbjct: 306 SP 307
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +3
Query: 735 GXPPPXPXKXPGSPPWXTPXGXPXXTXPXSPGXXXGLFPXEXGGGXPXXXXG 890
G PPP P GSPP P P L P + GG P G
Sbjct: 299 GSPPPPPA--GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 348
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Frame = -3
Query: 574 PPXGGGXXPPPXXKXXXPGSXXGGXXGXPKXXPXXPP-GXQRFFXRGGXPFXXPXXPXXX 398
P G G PPP P G P P PP G R G P P P
Sbjct: 269 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP--PPPPPPRG 326
Query: 397 SP 392
SP
Sbjct: 327 SP 328
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +3
Query: 735 GXPPPXPXKXPGSPPWXTPXGXPXXTXPXSPGXXXGLFPXEXGGGXPXXXXG 890
G PPP P GSPP P P L P + GG P G
Sbjct: 284 GSPPPPPA--GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 333
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Frame = -3
Query: 574 PPXGGGXXPPPXXKXXXPGSXXGGXXGXPKXXPXXPP-GXQRFFXRGGXPFXXPXXPXXX 398
P G G PPP P G P P PP G R G P P P
Sbjct: 254 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP--PPPPPPRG 311
Query: 397 SP 392
SP
Sbjct: 312 SP 313
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 827 GXXGXGXSGXPXGGXPGGGXGXFXXXGGG 741
G G G G GG GGG G GGG
Sbjct: 151 GYGGGGGGGGDFGGYGGGGMGGGGYGGGG 179
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = -2
Query: 827 GXXGXGXSGXPXGGX-PGGGXGXFXXXGGG 741
G G G SG GG PGGG G GGG
Sbjct: 219 GDGGYGPSGGYGGGYGPGGGYGMGGGGGGG 248
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,239,882
Number of Sequences: 27780
Number of extensions: 173761
Number of successful extensions: 1227
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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