Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_I10
         (882 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.     225   1e-60
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.       209   7e-56
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    27   0.57 
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    27   1.0  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   2.3  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   4.0  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    23   9.3  

>AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.
          Length = 136

 Score =  225 bits (551), Expect = 1e-60
 Identities = 110/115 (95%), Positives = 113/115 (98%)
 Frame = +2

Query: 80  GVKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLV 259
           G KAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLV
Sbjct: 13  GGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLV 72

Query: 260 REIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQL 424
           REIAQDFKTDLRFQS+A+ ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQL
Sbjct: 73  REIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQL 127



 Score = 29.1 bits (62), Expect = 0.19
 Identities = 12/14 (85%), Positives = 14/14 (100%)
 Frame = +1

Query: 49 RTKQTARKSTGGES 90
          RTKQTARKSTGG++
Sbjct: 3  RTKQTARKSTGGKA 16


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score =  209 bits (511), Expect = 7e-56
 Identities = 103/105 (98%), Positives = 103/105 (98%)
 Frame = +2

Query: 80  GVKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLV 259
           G KAPRKQLA KAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLV
Sbjct: 11  GGKAPRKQLARKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLV 70

Query: 260 REIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 394
           REIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71  REIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 115



 Score = 29.1 bits (62), Expect = 0.19
 Identities = 12/14 (85%), Positives = 14/14 (100%)
 Frame = +1

Query: 49 RTKQTARKSTGGES 90
          RTKQTARKSTGG++
Sbjct: 1  RTKQTARKSTGGKA 14


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 27.5 bits (58), Expect = 0.57
 Identities = 13/50 (26%), Positives = 30/50 (60%)
 Frame = +2

Query: 188 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASE 337
           + +IR   K +++ + +     L+RE+A + K  + F+ +AVM + +++E
Sbjct: 71  VNDIRNRFKDSDVDVTRKDGILLLRELAAEVKNFMDFKMNAVMRIMDSAE 120


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 364 HQLVRHSCQKGHHYAKGYSAGEESAGR 444
           HQL+ +S  +    ++G S G  SAGR
Sbjct: 219 HQLITYSVGEAEQQSRGLSTGGPSAGR 245


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 58  QTARKSTGGESSAQTTRDESCPKKRTGDRRREEAPQISTRHRSPQRDK 201
           QTA  +T  +SS Q    E+  K++   RRRE   Q   + +  Q+ +
Sbjct: 152 QTAANATLQQSSGQGGNRETARKRQQRLRRRERERQQQQQQQQQQQQQ 199


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -3

Query: 217 AFLVSPYLSEGYGAGSISVGLLHAAGRRCAFSGSFRRELFARSFHPL 77
           +F   P LS+G+    ++   L  A  RC F   ++ E    S H L
Sbjct: 362 SFDTDPKLSQGHKCDVVAATFLDVAVLRCLFISHWQEEGVYWSLHYL 408


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 14/52 (26%), Positives = 22/52 (42%)
 Frame = -3

Query: 229 QKLGAFLVSPYLSEGYGAGSISVGLLHAAGRRCAFSGSFRRELFARSFHPLS 74
           Q  G +   P   + +G  + SVG +   G    F+  F       +FHPL+
Sbjct: 106 QTSGNYTTLPQYFKQHGYRTHSVGKVFHPGASSNFTDDFPLSWSEPAFHPLT 157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,077
Number of Sequences: 2352
Number of extensions: 12559
Number of successful extensions: 33
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)