Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_I09
(882 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 131 2e-29
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 126 1e-27
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 95 2e-18
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 68 4e-10
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 59 2e-07
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 58 3e-07
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 44 0.005
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 44 0.005
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.084
UniRef50_Q62G91 Cluster: Putative uncharacterized protein; n=1; ... 36 1.8
UniRef50_Q3W8D6 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 34 4.2
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.5
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase... 33 7.3
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 131 bits (317), Expect = 2e-29
Identities = 69/113 (61%), Positives = 71/113 (62%)
Frame = +2
Query: 485 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 664
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 665 CRLPDTCPPFXXXXXXXXXXXXRCRYLSSV*VVRSKLGLCARTPRSXPTXAPY 823
CRLPDTCPPF +C P S PT APY
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFS-PTAAPY 113
Score = 63.7 bits (148), Expect = 6e-09
Identities = 33/56 (58%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Frame = +3
Query: 675 RIPVRLSP--LREAWXFLIAHAVGISVRCRSXAPSWGCVXEPPVXPRPXXLIGTIV 836
R+P P LREAW FLIAHAVGISVRCRS APSW PP P TIV
Sbjct: 63 RLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIV 118
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 126 bits (303), Expect = 1e-27
Identities = 73/120 (60%), Positives = 78/120 (65%)
Frame = +2
Query: 317 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 496
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 497 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 676
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 95.1 bits (226), Expect = 2e-18
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +2
Query: 503 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 664
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 67.7 bits (158), Expect = 4e-10
Identities = 42/83 (50%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = -2
Query: 836 DDSTDKXXRSGXNGGFXHTAPAWSXRPTPN*DTYSVSYEKAPRFPKGRKADRYPVSG-RV 660
DDS K S G +PAWS RP P+ DT SVSYEKAPRFPKG+KA++ VSG R
Sbjct: 13 DDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQ--VSGKRQ 70
Query: 659 GTGERTRE-LPGGNAWYLYSPVG 594
G R E G + SPVG
Sbjct: 71 GRNRRAHEGAAGEKSPASLSPVG 93
Score = 65.3 bits (152), Expect = 2e-09
Identities = 38/84 (45%), Positives = 45/84 (53%)
Frame = -1
Query: 828 YR*GAXVGXERGVRAHSPSLERTTYTELRYLQREL*ESXTLPEGEKGGQVSGKRQGRNRR 649
YR G ERGVRA+SP+ ++ P+G+K QVSGKRQGRNRR
Sbjct: 16 YRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRR 75
Query: 648 AHEGASRGKRLVSL*SCRVSPPLT 577
AHEGA+ K SL PPLT
Sbjct: 76 AHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -3
Query: 493 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 380
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 58.8 bits (136), Expect = 2e-07
Identities = 34/69 (49%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +3
Query: 606 IKIPGVSPWKLPRALSCSDPAAYRIPVRLSPLREAWXFLIAHAV--GISVRCRSXAPSWG 779
+KI VS LP ALSCS+PA RIPV P A ++H+ GIS RCRS APSW
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPV--PPFSLAGSVALSHSSHSGISARCRSFAPSWA 89
Query: 780 CVXEPPVXP 806
PP P
Sbjct: 90 VSKNPPFSP 98
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 293 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 460
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 58.0 bits (134), Expect = 3e-07
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +2
Query: 392 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 565
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 566 IDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 664
I Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 95 DPDMIRYIDEFGQTTTRMQ 151
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 412 HSKAVIRLSTESGDNAGKNM 471
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 44.0 bits (99), Expect = 0.005
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1
Query: 643 VRSPVPTLPLTGYLSAFLPFG 705
+RSPVPTLPLTGYLSAFLP G
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSG 21
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +3
Query: 219 INKLTTTIAFILCFRFRVEVWEVFSALMNRPTRGERRFAYW 341
+++LT L RF V V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.084
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 363 ERGSGRAPNTQTASPRALADSLMQ 292
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_Q62G91 Cluster: Putative uncharacterized protein; n=1;
Burkholderia mallei|Rep: Putative uncharacterized
protein - Burkholderia mallei (Pseudomonas mallei)
Length = 105
Score = 35.5 bits (78), Expect = 1.8
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -3
Query: 709 ASRRGERRTGIR*AAGSEQESARGSFQGETPGIFIVLSG 593
A RGERR+ AAGS + ARG+ +GE PG+ L G
Sbjct: 11 AGERGERRSAAASAAGSGRRGARGA-RGEAPGLAARLKG 48
>UniRef50_Q3W8D6 Cluster: DEAD/DEAH box helicase:Helicase, C-terminal;
n=1; Frankia sp. EAN1pec|Rep: DEAD/DEAH box
helicase:Helicase, C-terminal - Frankia sp. EAN1pec
Length = 1969
Score = 34.3 bits (75), Expect = 4.2
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 722 EKAPRFPKGRKADRYPVSGRVGTGERTRE-LPGGNAWY 612
E P FP GR A +P +GR T T + + G ++WY
Sbjct: 902 EGLPAFPPGRPAPTFPTTGRTSTPAATFDSITGASSWY 939
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.5
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -3
Query: 502 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 380
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.5 bits (73), Expect = 7.3
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -3
Query: 253 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQIN 86
+MNA V + FIAA + +T + AFF L S G ++VSY VW ++
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDLH 77
>UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase
kinase 10; n=21; Euteleostomi|Rep: Mitogen-activated
protein kinase kinase kinase 10 - Homo sapiens (Human)
Length = 954
Score = 33.5 bits (73), Expect = 7.3
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = -3
Query: 694 ERRTGIR*AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPAT 515
ER G+ GS+Q S+ G++P + GFA+ + +F +A GG + +P +
Sbjct: 574 ERLKGL--GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYS 631
Query: 514 RPFYGSWP 491
P Y S P
Sbjct: 632 TPSYLSVP 639
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 813,760,469
Number of Sequences: 1657284
Number of extensions: 16603631
Number of successful extensions: 44756
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 42461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44716
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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