Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_I06
         (882 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0156 - 1233431-1233925                                           31   1.6  
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350...    30   2.8  
01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,437...    29   3.7  
02_05_0435 - 28958422-28958665,28959328-28959462,28960056-289602...    28   8.6  

>08_01_0156 - 1233431-1233925
          Length = 164

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -2

Query: 839 LGANDLHRTEIPTA*AMRKRHASRREKGXTGIPVSGRV-GTGRAHEELPGGNA 684
           LG  D   TE+  A A     A+R E+G  G    GR  G GRA +E   G A
Sbjct: 89  LGDADATATEVDAAAAAEAEAAARGERGDGGGDGGGRAGGRGRARDEREKGAA 141


>01_07_0021 -
           40533864-40534583,40534779-40534814,40534909-40535048,
           40535837-40535922,40536430-40536653,40536770-40536865,
           40538766-40538833,40539945-40540055,40540799-40540955
          Length = 545

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +1

Query: 595 FHRLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSSCALPVPTLPLTGIPV 753
           F +  PP EH     S+     PT        PP ++   +P+P+ P  G+PV
Sbjct: 427 FEQPPPPPEHPPPPESTSPPPPPTSDPPPVPPPPPTTGSFMPIPSAPFAGLPV 479


>01_01_0588 +
           4372877-4372949,4374328-4376262,4376940-4377015,
           4378900-4378970,4379038-4379144,4379241-4379711,
           4379791-4379976,4380132-4380425,4380820-4381434,
           4382219-4382615,4382768-4382850,4383397-4383567,
           4384046-4384243,4384754-4385314,4385401-4385460,
           4385553-4385869,4385980-4386403,4386539-4387006,
           4387093-4387209,4387306-4387427,4387506-4388247,
           4388453-4388485,4388625-4388879,4388975-4389160,
           4390115-4390453,4391293-4392045
          Length = 3017

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
 Frame = +2

Query: 560 PGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFP----LEAPRALSLFR 727
           PG V RPR  R    S    +  ++D+   G  T    KD   +P    +  P    +  
Sbjct: 454 PGVV-RPRKRRKHCSS----NENQVDSWPSGFSTTTPMKDGLAYPDTMAVSNPLRRVILP 508

Query: 728 PCRLPEYLSXLSPFG 772
           PCRL E +  LSPFG
Sbjct: 509 PCRLQENIISLSPFG 523


>02_05_0435 -
           28958422-28958665,28959328-28959462,28960056-28960211,
           28960287-28961092,28961177-28961254,28961809-28961883,
           28962127-28962215,28962735-28962843,28963007-28963086,
           28963739-28963794,28963876-28963958,28964049-28964118,
           28964200-28964309,28964395-28964548,28965183-28965382,
           28966175-28966348,28969080-28969277,28970564-28970791
          Length = 1014

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 9/64 (14%)
 Frame = +1

Query: 712 ALPVPTLPLTGIPVXPFSLREAWR----FLIAHAVG---ISVRCRSF-APSWAV-CTNPP 864
           A+P+P + L+G      SLR  W      ++ H  G   + V C++F   SW V    PP
Sbjct: 94  AIPLPLVRLSGENPVLVSLRSGWTAAVVLIVVHFPGDVILEVPCQNFLLVSWEVDAAGPP 153

Query: 865 FXPT 876
           + P+
Sbjct: 154 WRPS 157


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,695,388
Number of Sequences: 37544
Number of extensions: 497059
Number of successful extensions: 1464
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1464
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)