Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_I04
         (901 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.4  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   5.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   7.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.6  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 12/39 (30%), Positives = 12/39 (30%)
 Frame = +3

Query: 747 PPXXPPXXGGXXPPPAXKXXPXPPPXXXXXGGPFXXPPG 863
           P   P       PP      P  PP     GGP   P G
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAG 608


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +2

Query: 758 PPPXGGXXPPPGX*XXXGAPP 820
           PPP  G  PPP      G PP
Sbjct: 110 PPPMMGMRPPPMMVPTMGMPP 130


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = -1

Query: 859 GGXXKGPPXXXXLGGGXGXXLXAGGGXXPPXXGGXXGG 746
           GG   GP       GG G  +  GGG      GG  GG
Sbjct: 539 GGGSDGPEYEGAGRGGVGSGIGGGGGG---GGGGRAGG 573


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
 Frame = -1

Query: 820 GGGXGXXLXAGGGXXP--PXXGGXXGG 746
           GGG G     GGG     P  GG  GG
Sbjct: 204 GGGSGGGAPGGGGGSSGGPGPGGGGGG 230


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.312    0.146    0.488 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,633
Number of Sequences: 2352
Number of extensions: 9400
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97160985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)