Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_I02
(890 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 198 7e-52
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 189 5e-49
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 188 9e-49
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 159 5e-40
SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces po... 154 2e-38
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 135 9e-33
SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces po... 115 1e-26
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 31 0.17
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 31 0.17
SPCC576.04 |||bax inhibitor-like protein|Schizosaccharomyces pom... 31 0.29
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 30 0.38
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 30 0.51
SPAC1952.10c |||conserved fungal protein |Schizosaccharomyces po... 29 0.89
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 29 1.2
SPAC1250.04c |atl1||alkyltransferase-like protein Atl1|Schizosac... 28 2.1
SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|ch... 28 2.1
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 28 2.1
SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex lar... 27 2.7
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 27 2.7
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 27 3.6
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 27 3.6
SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual 27 4.7
SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|ch... 27 4.7
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 27 4.7
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 27 4.7
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 26 8.3
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 198 bits (484), Expect = 7e-52
Identities = 92/210 (43%), Positives = 138/210 (65%), Gaps = 3/210 (1%)
Frame = +1
Query: 166 GYVGFANLPNQVHXKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDLYP---ERVIPDAT 336
GYVGFA+LPNQ H + V++GF F ++V+GESG GKSTLVN+L D+YP + + D
Sbjct: 74 GYVGFASLPNQWHRRCVRQGFNFNVLVLGESGSGKSTLVNTLLNRDVYPPTQKSLTGDFG 133
Query: 337 EKTNQTVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRD 516
TV +++S VEI E G+ L+L V+DTPG+GD IDNTDC++ ++ I+ +++++L
Sbjct: 134 VNPEPTVMINSSAVEIVENGISLQLNVIDTPGFGDFIDNTDCWQPVLTDIEGRYDQYLEL 193
Query: 517 ESGLNRRNIVDNRIHCCFYFISPFGHGLKPLDIEFMKQLHNKVNIVPVIAKADCLTKKEV 696
E R I D R+H C +FI P GH + +++ M LH KVNI+P+IAKAD LT E+
Sbjct: 194 EKHNPRSTIQDPRVHACIFFIQPTGHAISAMELRVMLALHEKVNIIPIIAKADTLTDDEL 253
Query: 697 QRLKSRVMEEIEREGIKIYPLPDCDSDEXE 786
K ++ +I+ I+I+ P ++D+ E
Sbjct: 254 NFTKEMILRDIQYHNIRIFFPPTYETDDPE 283
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 189 bits (460), Expect = 5e-49
Identities = 88/207 (42%), Positives = 132/207 (63%), Gaps = 1/207 (0%)
Frame = +1
Query: 169 YVGFANLPNQVHXKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTN 348
YVGF ++ +Q++ K +++GF+F +MVVG SG GKSTL+N+LF L + D
Sbjct: 12 YVGFDSITSQINRKLIRRGFQFNVMVVGPSGSGKSTLINTLFSAHLMDSKGRLDYQAPYR 71
Query: 349 QTVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRDESGL 528
QT ++ ++ + E V+L+L ++DTPGYGD I+N C+ II+YI +Q +LR E
Sbjct: 72 QTTEIHVTSQVVRENRVQLQLNLIDTPGYGDQINNDKCWEPIIKYIRDQHSSYLRRELNS 131
Query: 529 NR-RNIVDNRIHCCFYFISPFGHGLKPLDIEFMKQLHNKVNIVPVIAKADCLTKKEVQRL 705
+R + + D R+HCC +FI P GH L+P+DI +K+L VN+VPVIAK+D LT +E
Sbjct: 132 HREKRLQDTRVHCCLFFIRPTGHSLRPIDIAVLKRLTEVVNVVPVIAKSDSLTLEERAAF 191
Query: 706 KSRVMEEIEREGIKIYPLPDCDSDEXE 786
K ++ EE + I +YP D+DE E
Sbjct: 192 KQQIREEFVKHDINLYPYDSDDADEEE 218
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 188 bits (458), Expect = 9e-49
Identities = 87/208 (41%), Positives = 139/208 (66%), Gaps = 4/208 (1%)
Frame = +1
Query: 169 YVGFANLPNQVHXKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDLY----PERVIPDAT 336
+VG A+LPNQ H + G FTLM+ GESGLGK+T N+LF T + PE+V
Sbjct: 8 FVGIADLPNQRHKIVSRNGVAFTLMLCGESGLGKTTFCNTLFSTTIKSHMGPEKVRAKHA 67
Query: 337 EKTNQTVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRD 516
EKT V+++ + E+EE+ LRLTV+DTPG+GD I+N+ C+ S++++I++Q E ++R
Sbjct: 68 EKT---VEIEITKAELEEKNFHLRLTVIDTPGFGDFINNSGCWESVVEFIEDQHESYMRQ 124
Query: 517 ESGLNRRNIVDNRIHCCFYFISPFGHGLKPLDIEFMKQLHNKVNIVPVIAKADCLTKKEV 696
+ +RR I+D RIH C YF+ P +G++P+D+E MK + +VN++PVIAKAD T++++
Sbjct: 125 DQQPDRRKIIDMRIHACLYFLRPVRNGVRPMDLEAMKHISKRVNLIPVIAKADMYTRRDL 184
Query: 697 QRLKSRVMEEIEREGIKIYPLPDCDSDE 780
K+R+ + +E + +Y P+ D +
Sbjct: 185 ALYKTRISQVLEYHQVNVYK-PNMDEGD 211
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 159 bits (386), Expect = 5e-40
Identities = 77/191 (40%), Positives = 116/191 (60%), Gaps = 1/191 (0%)
Frame = +1
Query: 184 NLPNQVHXKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEK-TNQTVK 360
+LP++ +K T+M+ G SG GK+T N+LF T L PE+ A E +T++
Sbjct: 15 SLPSKRENLIKRKECGLTIMLCGASGTGKTTFFNTLFATSLQPEKSYETAKETIAKKTLE 74
Query: 361 LDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRDESGLNRRN 540
+ + IEE G + LTV+DTPG+GD IDNT C+ ++ +Y+DEQ ER+L + R
Sbjct: 75 VKKNKAVIEEDGFHINLTVLDTPGFGDFIDNTSCWNTVAEYLDEQHERYLIHDQNSLRVP 134
Query: 541 IVDNRIHCCFYFISPFGHGLKPLDIEFMKQLHNKVNIVPVIAKADCLTKKEVQRLKSRVM 720
D R+H C YFI+P G+ PLD+ MK+L VN+VPVIAKAD T E+ ++K ++
Sbjct: 135 RKDTRVHVCLYFITPVSFGMLPLDVLAMKELSTHVNLVPVIAKADTFTTPELTQIKQKIR 194
Query: 721 EEIEREGIKIY 753
+E + I ++
Sbjct: 195 RILEAQSIDVF 205
>SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 154 bits (373), Expect = 2e-38
Identities = 83/195 (42%), Positives = 115/195 (58%), Gaps = 4/195 (2%)
Frame = +1
Query: 208 KSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDL--YPERVIPDATEKTNQTVKLDASTVE 381
KS KKG LMVVG+ GLG++ +N+L L + P + + T
Sbjct: 45 KSSKKGIPLNLMVVGDVGLGRTAFINTLCEKPLIRHNNNFDPAEASSVSPVEIVPYQTDI 104
Query: 382 IEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRDESGLNRR-NIVDNRI 558
I E G K+ LTV+DTP +G+AIDN + F I+QYI+ Q++ L +ES + R D+R+
Sbjct: 105 ILEDGTKINLTVLDTPHFGEAIDNENNFDIILQYIESQYDNVLEEESRIKRNARFCDDRV 164
Query: 559 HCCFYFISPFGHGLKPLDIEFMKQLHNKVNIVPVIAKADCLTKKEVQRLKSRVMEEIERE 738
H YFISP GHGL+ LDIE M++L +VNI+P IAKAD LT +E+Q K + +IE
Sbjct: 165 HALIYFISPTGHGLRELDIELMRRLAPRVNIIPAIAKADSLTAQELQTTKEMINADIEYY 224
Query: 739 GIKIYPLP-DCDSDE 780
I +Y P D + DE
Sbjct: 225 KIPVYDFPYDIEEDE 239
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 135 bits (326), Expect = 9e-33
Identities = 69/198 (34%), Positives = 113/198 (57%), Gaps = 1/198 (0%)
Frame = +1
Query: 172 VGFANLPNQVHXKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQ 351
+G + +Q + + + G + L+VVGES LGK+T VNS ++ D + +
Sbjct: 99 IGINDFNHQHYSRVCRNGIDINLIVVGESSLGKTTFVNSFLQSN--------DTNFRPKK 150
Query: 352 TVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRDESGLN 531
T+ + + K LT+VDTPG+GD DN++C+R I + + + ++E ++
Sbjct: 151 TMDFVEHKATLSDGDQKFNLTIVDTPGFGDKSDNSNCWRPIATNLLHRLNAYFQNEVKMD 210
Query: 532 RRNI-VDNRIHCCFYFISPFGHGLKPLDIEFMKQLHNKVNIVPVIAKADCLTKKEVQRLK 708
R +D+RIH C +FI+P GH L+PL+I MK++ VNI+PVI KAD +T E+ K
Sbjct: 211 RETSEIDSRIHGCLFFINPNGHRLQPLEIYIMKKIDQFVNIIPVIGKADTMTSDELNHFK 270
Query: 709 SRVMEEIEREGIKIYPLP 762
RV+ ++ RE I+ + P
Sbjct: 271 KRVIADMVREKIRYFREP 288
>SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 115 bits (276), Expect = 1e-26
Identities = 61/193 (31%), Positives = 105/193 (54%), Gaps = 3/193 (1%)
Frame = +1
Query: 217 KKGFEFTLMVVGESGLGKSTLVNSLFLTD-LYPERVIPDATEKTNQTVKLDASTVEIEER 393
KKG + +MV G S +NSL L E I ++ +++ +I E
Sbjct: 14 KKGKKLRIMVAGSSYTSYQACINSLCSKQILEAETEIDPLKAHIDRILEIREFNADILED 73
Query: 394 GVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRDESGLNRRN-IVDNRIHCCF 570
+ LTV++ G+GD IDN+ F + Y++ QF++ L +ES + R + D R+
Sbjct: 74 EFHVDLTVIEVNGFGDKIDNSASFEVVTHYLESQFDQALIEESKIKRNSKFTDTRVDALL 133
Query: 571 YFISPFGHGLKPLDIEFMKQLHNKVNIVPVIAKADCLTKKEVQRLKSRVMEEIEREGIKI 750
YFI+P GH L D+E MK+ +VN++PVI ++ T++E++ K +M+++++ IK+
Sbjct: 134 YFIAPRGHCLSEFDLEAMKRFSKRVNVIPVIGNSNAFTEEELKNFKDVIMKDLKQCNIKV 193
Query: 751 YPLP-DCDSDEXE 786
+ P D + DE E
Sbjct: 194 FDFPWDPEEDEDE 206
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 31.5 bits (68), Expect = 0.17
Identities = 25/85 (29%), Positives = 39/85 (45%)
Frame = +1
Query: 238 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRLTV 417
L+VVGE+G GK+T + D Y + T+ A V EE GV+L TV
Sbjct: 511 LIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCTQPRRVAAMSVAKRVS-EEMGVRLGSTV 569
Query: 418 VDTPGYGDAIDNTDCFRSIIQYIDE 492
GY ++ ++I+Y+ +
Sbjct: 570 ----GYSIRFEDVTGPDTVIKYMTD 590
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 31.5 bits (68), Expect = 0.17
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 232 FTLMVVGESGLGKSTLVNSLFLTDLYPERVIPD-ATEKTNQTVKLDASTVEIE 387
F L+++G+SG+GKS L+ F D Y E I + +T +L+ TV+++
Sbjct: 9 FKLLLIGDSGVGKSCLL-LRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQ 60
>SPCC576.04 |||bax inhibitor-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 266
Score = 30.7 bits (66), Expect = 0.29
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 783 VFVTVAIGQRVYLY-AFPFDFFHNPRFQSLNFFLSETVRFG 664
+FVT G YL+ AF F +P F LNFF+S V FG
Sbjct: 70 LFVTSLFGGIFYLHPAFSFWVQMHPWFLILNFFISLVVLFG 110
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 30.3 bits (65), Expect = 0.38
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +1
Query: 238 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEK--TNQTVKLDASTVEI 384
L+VVG+ G GK+ L+ +F + +PER +P E T+ T ++ +E+
Sbjct: 17 LVVVGDGGCGKTCLL-IVFSSGTFPERYVPTVFENYITDITYGPNSKVIEL 66
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 29.9 bits (64), Expect = 0.51
Identities = 14/49 (28%), Positives = 30/49 (61%)
Frame = +1
Query: 241 MVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIE 387
+++G +G GKST+V+++ + +P +++ A E + +K +T IE
Sbjct: 37 LIIGPNGTGKSTIVSAICIGLGWPPKLLGRAKE-AREFIKYGKNTATIE 84
>SPAC1952.10c |||conserved fungal protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 29.1 bits (62), Expect = 0.89
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 568 FYFISPFGHGLKPLDIEFMKQLH--NKVNIVPVIAK 669
FY IS FG+GL+ E+++ +H KVN P + K
Sbjct: 323 FYCISNFGYGLR----EYLRYIHQKQKVNAAPAVPK 354
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 496 FERFLRDESGLNRRNIVDNRIHCCFYFISPFGHGLKPLDIEFMKQL--HNKVNIVPVIAK 669
F++ L+D G R +I+DN C S F + PL + + + N VN V V+ K
Sbjct: 1188 FQKLLKDAKGQLRIHIIDNMSRICLRETSLF---ISPLMLSTLDMIIAENNVNEVSVLFK 1244
Query: 670 A 672
+
Sbjct: 1245 S 1245
>SPAC1250.04c |atl1||alkyltransferase-like protein
Atl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 108
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 622 MKQLHNKVNIV--PVIAKADCLTKKEVQRLKSRVMEEIEREGIKIY 753
MK LH + ++ VI ++K+++ + R + +E EG++IY
Sbjct: 45 MKHLHPETHVPWHRVINSRGTISKRDISAGEQRQKDRLEEEGVEIY 90
>SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 701
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +1
Query: 607 LDIEFMKQLH-NKVNIVPVIAKA-DCLTKKEVQRLKSRVMEEIE 732
LD EFM + ++ NI+ K+ DCLTK+ ++L + +MEEI+
Sbjct: 348 LDKEFMDLIEEHEKNILDAAVKSIDCLTKEGTEKLFA-LMEEIK 390
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = +1
Query: 238 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIE 387
L+++G+SG+GKS L+ P + + +T++LD ++++
Sbjct: 12 LLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQ 61
>SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex large
subunit Nuc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1689
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -3
Query: 585 R*YEVEAAMNAIVHNVTTV 529
R Y VEAA NAIVH V++V
Sbjct: 1574 RIYGVEAARNAIVHEVSSV 1592
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 139 KHSQILXTPGYVGFANLPNQVHXKSVKKGFEFTLMVVGESGLGKSTLV 282
KH+ + P + + + +VH S K + TL+ G+SG+GK+ V
Sbjct: 15 KHADLDPEPSLLRYCD--GRVHVGSGKLAEKKTLLTGGDSGIGKAAAV 60
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 27.1 bits (57), Expect = 3.6
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +1
Query: 229 EFTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLR 408
+F L+ +GE +GK++L+ + F+ D + D T + + + T+ +E+R V+L+
Sbjct: 11 KFKLVFLGEQSVGKTSLI-TRFMYDQF------DNTYQATIGIDFLSKTMYLEDRTVRLQ 63
Query: 409 LTVVDTPG 432
L DT G
Sbjct: 64 LW--DTAG 69
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 184 NLPNQVHXKSVKKGFEFTLMVVGESGLGKSTLVNSLF 294
NLP ++ SV + + +VG +G GKSTL +LF
Sbjct: 1236 NLPLVLNDISVNIKPQEKIGIVGRTGAGKSTLTLALF 1272
>SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1029
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 544 VDNRIHCCFYFISPFGHGLKPLDIEFMKQLHN 639
+D C F+S F H L P + KQL N
Sbjct: 562 IDALSSCMEEFVSSFSHELTPFASQLAKQLRN 593
>SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 26.6 bits (56), Expect = 4.7
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = -3
Query: 804 GPVL*XF-VFVTVAIGQRVYLYAFPFDFFHNPRFQSLNFFLSETVRFGDNRYDVNFVVQL 628
G VL F VF VA+ R +YAF + + ++ FFLS + +G + + F ++L
Sbjct: 579 GRVLAAFAVFEAVALIIRGPIYAFVYTESMKVSYPNMIFFLSAVI-YG-CCFIIIFFMRL 636
Query: 627 FHELNIKR 604
+ LN KR
Sbjct: 637 YRPLNRKR 644
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 26.6 bits (56), Expect = 4.7
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 244 VVGESGLGKSTLVNSLFLTDLYP-ERVIPDATEKTN-QTVKLDASTVEIEERGVKLRLTV 417
+VG SG GKSTLV L T YP E + D TN T L ++++ L T+
Sbjct: 1133 IVGISGSGKSTLVELLRKT--YPSEDIYIDGYPLTNIDTNWLLKKVAIVDQKPHLLGSTI 1190
Query: 418 VDTPGYG 438
+++ YG
Sbjct: 1191 LESLLYG 1197
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 229 EFTLMVVGESGLGKSTLVNSLFLTDLYPE 315
E+ L+VVG+ G+GKS L L + E
Sbjct: 8 EYKLVVVGDGGVGKSALTIQLIQSHFVDE 36
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 25.8 bits (54), Expect = 8.3
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = +1
Query: 130 QQXKHSQILXTPGYVGFANLPNQVHXKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDLY 309
Q KH + + +VG A QV +KK +G +GK LV ++ +
Sbjct: 29 QSTKHQRSISD--FVGTAGPGRQVGNWIIKK-------TIGAGSMGKVKLVVNILTGEKA 79
Query: 310 PERVIPDATEKTNQTVKL 363
++IP T+QTV++
Sbjct: 80 ALKMIPFTPNNTSQTVRV 97
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,822,524
Number of Sequences: 5004
Number of extensions: 51731
Number of successful extensions: 265
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 255
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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