Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_I01
         (903 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.4  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   2.1  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   7.3  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = +3

Query: 765 PXXXPPPPPPXXKXKKXPPXXPP 833
           P   PPPPPP       PP   P
Sbjct: 527 PLGPPPPPPPGGAVLNIPPQFLP 549



 Score = 24.2 bits (50), Expect = 5.5
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 753 PXXXPXXXPPPPPP 794
           P   P   PPPPPP
Sbjct: 577 PNAQPPPAPPPPPP 590


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 22.6 bits (46), Expect(2) = 2.1
 Identities = 10/24 (41%), Positives = 10/24 (41%)
 Frame = -3

Query: 847 GXXXXGGXXGGXFXXFXXGGGGGG 776
           G    G   GG       GGGGGG
Sbjct: 544 GPEYEGAGRGGVGSGIGGGGGGGG 567



 Score = 21.0 bits (42), Expect(2) = 2.1
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 793 GGGGGGXXKGXXXG 752
           GGGGGG   G   G
Sbjct: 563 GGGGGGGRAGGGVG 576


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -3

Query: 829  GXXGGXFXXFXXGGGGGGXXKG 764
            G  GG       GGGGGG  KG
Sbjct: 1484 GGYGGSPTKGAGGGGGGGGGKG 1505


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 409,366
Number of Sequences: 2352
Number of extensions: 5676
Number of successful extensions: 67
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)