Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_I01
(903 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.12
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.12
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.12
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 26 0.22
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 26 0.23
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 32 0.49
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 32 0.65
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 1.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 1.4
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 1.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.5
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 31 1.5
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.6
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 2.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.6
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 30 2.6
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 3.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 3.4
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 29 3.4
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 3.4
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 4.5
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 4.5
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 4.5
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 6.0
U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 7.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 7.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 7.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 7.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 7.9
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = +3
Query: 663 GAPPXXHXKXXPPX*XXXXXXPPXKXXKXXPXXXPXXXPPPPPP--XXKXKKXPPXXPPX 836
G PP PP PP P P PPPPPP K PP PP
Sbjct: 734 GLPPITGGPPPPPP---PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Query: 837 XXXPP 851
P
Sbjct: 791 GMFAP 795
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 777 PPPPPPXXKXKKXPPXXPPXXXXPP 851
PPPPP PP PP PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPP 737
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 3/45 (6%)
Frame = +3
Query: 726 PPXKXXKXXPXXXPXXXPPPPP---PXXKXKKXPPXXPPXXXXPP 851
PP P PPPPP P PP PP PP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = +3
Query: 663 GAPPXXHXKXXPPX*XXXXXXPPXKXXKXXPXXXPXXXPPPPPP--XXKXKKXPPXXPPX 836
G PP PP PP P P PPPPPP K PP PP
Sbjct: 734 GLPPITGGPPPPPP---PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Query: 837 XXXPP 851
P
Sbjct: 791 GMFAP 795
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 777 PPPPPPXXKXKKXPPXXPPXXXXPP 851
PPPPP PP PP PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPP 737
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 3/45 (6%)
Frame = +3
Query: 726 PPXKXXKXXPXXXPXXXPPPPP---PXXKXKKXPPXXPPXXXXPP 851
PP P PPPPP P PP PP PP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = +3
Query: 663 GAPPXXHXKXXPPX*XXXXXXPPXKXXKXXPXXXPXXXPPPPPP--XXKXKKXPPXXPPX 836
G PP PP PP P P PPPPPP K PP PP
Sbjct: 317 GLPPITGGPPPPPP---PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Query: 837 XXXPP 851
P
Sbjct: 374 GMFAP 378
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 777 PPPPPPXXKXKKXPPXXPPXXXXPP 851
PPPPP PP PP PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPP 320
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 3/45 (6%)
Frame = +3
Query: 726 PPXKXXKXXPXXXPXXXPPPPP---PXXKXKKXPPXXPPXXXXPP 851
PP P PPPPP P PP PP PP
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 26.2 bits (55), Expect(3) = 0.22
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 777 PPPPPPXXKXKKXPPXXPP 833
PPPPPP P PP
Sbjct: 794 PPPPPPLPPISSGAPPPPP 812
Score = 22.6 bits (46), Expect(3) = 0.22
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 765 PXXXPPPPPP 794
P PPPPPP
Sbjct: 765 PPPPPPPPPP 774
Score = 21.4 bits (43), Expect(3) = 0.22
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +3
Query: 753 PXXXPXXXPPPPP 791
P P PPPPP
Sbjct: 717 PTSRPKTPPPPPP 729
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 26.2 bits (55), Expect(3) = 0.23
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 777 PPPPPPXXKXKKXPPXXPP 833
PPPPPP P PP
Sbjct: 794 PPPPPPLPPISSGAPPPPP 812
Score = 22.6 bits (46), Expect(3) = 0.23
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 765 PXXXPPPPPP 794
P PPPPPP
Sbjct: 765 PPPPPPPPPP 774
Score = 21.4 bits (43), Expect(3) = 0.23
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +3
Query: 753 PXXXPXXXPPPPP 791
P P PPPPP
Sbjct: 717 PTSRPKTPPPPPP 729
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 32.3 bits (70), Expect = 0.49
Identities = 21/62 (33%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Frame = -3
Query: 850 GGXXXXGGXXGGXFXXFXXGGGG-GGXXKGXXXGXXFXXXXGGXXXXKXXXGGXXXXXWX 674
GG GG GG F GGGG GG G G GG GG
Sbjct: 57 GGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGGNQGGG 116
Query: 673 GG 668
GG
Sbjct: 117 GG 118
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 31.9 bits (69), Expect = 0.65
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 753 PXXXPXXXPPPPPPXXKXKKXPPXXPPXXXXPP 851
P P PPPPPP PP P PP
Sbjct: 244 PPPSPVCMPPPPPPCPMPIPCPPPPPACSCPPP 276
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +3
Query: 726 PPXKXXKXXPXXXPXXXPPPPPPXXKXKKXPPXXPPXXXXPP 851
PP + P PPPPPP PP PP
Sbjct: 615 PPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPP 656
Score = 25.0 bits (52), Expect(2) = 1.4
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +3
Query: 777 PPPPPPXXKXKKXPPXXPPXXXXPP 851
PPPPPP PP PP
Sbjct: 633 PPPPPPMGLPAVGAGAPPPPPPPPP 657
Score = 24.2 bits (50), Expect(2) = 1.4
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 753 PXXXPXXXPPPPPP 794
P P PPPPPP
Sbjct: 601 PENRPHAVPPPPPP 614
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +3
Query: 726 PPXKXXKXXPXXXPXXXPPPPPPXXKXKKXPPXXPPXXXXPP 851
PP + P PPPPPP PP PP
Sbjct: 441 PPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPP 482
Score = 25.0 bits (52), Expect(2) = 1.4
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +3
Query: 777 PPPPPPXXKXKKXPPXXPPXXXXPP 851
PPPPPP PP PP
Sbjct: 459 PPPPPPMGLPAVGAGAPPPPPPPPP 483
Score = 24.2 bits (50), Expect(2) = 1.4
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 753 PXXXPXXXPPPPPP 794
P P PPPPPP
Sbjct: 427 PENRPHAVPPPPPP 440
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 726 PPXKXXKXXPXXXPXXXPPPPPPXXKXKKXPPXXPP 833
PP P PPPPPP PP PP
Sbjct: 521 PPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPP 556
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = -2
Query: 560 PPXXGFV*XEKNYXXPPPXPXG*XXAXSXRAPXXPPPFSFXXXXSPXPVXPP 405
PP G N PPP P + P PPP P P PP
Sbjct: 507 PPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPP--PP 556
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 777 PPPPPPXXKXKKXPPXXPPXXXXP 848
PPPPPP + PP PP P
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPP 161
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 780 PPPPPXXKXKKXPPXXPPXXXXPP 851
PPPPP + + PP P PP
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPP 161
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = +3
Query: 669 PPXXHXKXXPPX*XXXXXXPPXKXXKXXPXXXPXXXPPPPPPXXKXKKXPPXXPPXXXXP 848
PP PP PP P P PP P P + PP PP P
Sbjct: 141 PPPPRVPRTPPPRSPPPRRPPMTPPS--PQRRPPRTPPSPEP-----RNPPRTPPSPIPP 193
Query: 849 P 851
P
Sbjct: 194 P 194
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -3
Query: 856 FXGGXXXXGGXXGGXFXXFXXG-GGGGGXXKGXXXGXXFXXXXGG 725
F GG GG GG F G GGGGG G G GG
Sbjct: 51 FGGGGGGGGGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGGGG 95
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 4/65 (6%)
Frame = -3
Query: 850 GGXXXXGGXXGGXFXXFXXGGGG----GGXXKGXXXGXXFXXXXGGXXXXKXXXGGXXXX 683
GG GG GG F GGGG GG +G G F G GG
Sbjct: 57 GGGGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGGGGGQ 116
Query: 682 XWXGG 668
GG
Sbjct: 117 RQGGG 121
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/63 (33%), Positives = 22/63 (34%)
Frame = -3
Query: 856 FXGGXXXXGGXXGGXFXXFXXGGGGGGXXKGXXXGXXFXXXXGGXXXXKXXXGGXXXXXW 677
F GG GG GG + GGGGG G G F GG GG
Sbjct: 66 FGGGNGGFGGGGGGNY-----GGGGGNQGGGGGGGFNF-NDIGGLINSMGGGGGGGQRQG 119
Query: 676 XGG 668
GG
Sbjct: 120 GGG 122
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 6/58 (10%)
Frame = +3
Query: 696 PPX*XXXXXXPPXKXXKXXPXXXPXXX-----PPPP-PPXXKXKKXPPXXPPXXXXPP 851
PP PP + P P PPPP PP PP PP PP
Sbjct: 466 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 726 PPXKXXKXXPXXXPXXXPPPPPPXXKXKKXPPXXPPXXXXPP 851
PP P PPPPPP K P P PP
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPP 1380
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 726 PPXKXXKXXPXXXPXXXPPPPPPXXKXKKXPPXXPP 833
PP P P PPPPP PP PP
Sbjct: 1360 PPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPP 1395
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +3
Query: 765 PXXXPPPPPPXXKXKKXPPXXPPXXXXP 848
P PPPPPP P PP P
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPPPPPP 1363
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +3
Query: 729 PXKXXKXXPXXXPXXXPPPPPPXXKXKKXPPXXPPXXXXPP 851
P + P PPPPPP PP P PP
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/81 (25%), Positives = 24/81 (29%)
Frame = +2
Query: 656 PKGXTPXPXPXXXPPXXXFXXXXPPXXXXKXXXXXXXLXXPXPPPPXXKXXKXPPXXSPX 835
P TP P P PP PP + P PPPP + P
Sbjct: 267 PPSVTPMPPPM--PPTPGMTPRPPPPPSS-------GMWPPPPPPPPGRTPGPPGMPGMP 317
Query: 836 XXXPPXKXIKXXXXGXPXXPP 898
PP + G P PP
Sbjct: 318 PPPPPSRFGPPGMGGMPPPPP 338
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 777 PPPPPPXXKXKKXPPXXPPXXXXP 848
PPPPPP PP PP P
Sbjct: 132 PPPPPPPPHYPPPPPHYPPPPPAP 155
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +3
Query: 729 PXKXXKXXPXXXPXXXPPPPPPXXKXKKXPPXXPPXXXXPP 851
P + P PPPPPP PP P PP
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/81 (25%), Positives = 24/81 (29%)
Frame = +2
Query: 656 PKGXTPXPXPXXXPPXXXFXXXXPPXXXXKXXXXXXXLXXPXPPPPXXKXXKXPPXXSPX 835
P TP P P PP PP + P PPPP + P
Sbjct: 277 PPSVTPMPPPM--PPTPGMTPRPPPPPSS-------GMWPPPPPPPPGRTPGPPGMPGMP 327
Query: 836 XXXPPXKXIKXXXXGXPXXPP 898
PP + G P PP
Sbjct: 328 PPPPPSRFGPPGMGGMPPPPP 348
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 3/69 (4%)
Frame = -3
Query: 865 FYXFXGGXXXXGGXXGGXFXXFXXGGG--GGGXXKGXXXGXXFXXXXGGXXXXK-XXXGG 695
F F GG G GG F GGG GGG G G + GG GG
Sbjct: 87 FGGFNGGYGQGGYGGGGDFGGGMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGG 146
Query: 694 XXXXXWXGG 668
+ GG
Sbjct: 147 YGMGGYGGG 155
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = -3
Query: 850 GGXXXXGGXXGGX-FXXFXXGGGGGGXXKGXXXGXXFXXXXGGXXXXKXXXGG 695
GG GG GG + GGGGGG G G GG GG
Sbjct: 135 GGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGG 187
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 850 GGXXXXGGXXGGXFXXFXXGGGGGGXXKGXXXGXXFXXXXGG 725
GG GG GG GGGGGG G G GG
Sbjct: 86 GGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGG 127
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = -3
Query: 850 GGXXXXGGXXGGXFXXFXXGGGGGGXXKGXXXGXXFXXXXGGXXXXKXXXGG 695
GG GG GG GGGGGG G G GG + GG
Sbjct: 76 GGGGNWGGNGGGGNGGGGRGGGGGGGG-GRGGGGGGRGGGGGGGGGRGGGGG 126
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +3
Query: 726 PPXKXXKXXPXXXPXXXPPPPPPXXKXKKXPPXXPPXXXXPP 851
PP P P P PPPP + PP PP PP
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPP--PPMCPPPP 66
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +3
Query: 669 PPXXHXKXXPPX*XXXXXXPPXKXXKXXPXXXPXXXPPPPPPXXKXKKXPPXXP 830
PP PP PP + P PPPPPP PP P
Sbjct: 31 PPPPPPMCAPPP--LPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/65 (32%), Positives = 24/65 (36%)
Frame = -3
Query: 856 FXGGXXXXGGXXGGXFXXFXXGGGGGGXXKGXXXGXXFXXXXGGXXXXKXXXGGXXXXXW 677
F GG GG GG GGGGGG +G G GG + GG +
Sbjct: 3 FRGGRGGGGGFRGGR------GGGGGGGFRGGRGG----DRGGGFRGGRGGFGGGGRGGY 52
Query: 676 XGGAP 662
G P
Sbjct: 53 DQGPP 57
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = -3
Query: 850 GGXXXXGGXXGGXFXXFXXGGGGGGXXKGXXXGXXFXXXXGG 725
GG GG GG GGGGG G G + GG
Sbjct: 342 GGRADSGGAAGGAGGAGGYSGGGGGGGGGAAAGGGYNAGGGG 383
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/54 (29%), Positives = 17/54 (31%), Gaps = 2/54 (3%)
Frame = +3
Query: 696 PPX*XXXXXXPPXKXXKXXPXXXPXXXP--PPPPPXXKXKKXPPXXPPXXXXPP 851
PP PP + P P PPPPP P PP PP
Sbjct: 459 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPP 512
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -3
Query: 856 FXGGXXXXGGXXGGXFXXFXXGGGGGGXXKG 764
F G GG GG + GGGGGG G
Sbjct: 88 FGSGSYAAGGAGGGGGGGYATGGGGGGGGGG 118
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -3
Query: 832 GGXXGGXFXXFXXGGGGGGXXKGXXXGXXFXXXXGGXXXXKXXXGGXXXXXWXGGA 665
GG GG GGGGGG G G GG G GGA
Sbjct: 787 GGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGA 842
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 777 PPPPPPXXKXKKXPPXXPPXXXXPPXK 857
PPPPPP K PP P P K
Sbjct: 85 PPPPPPPPPTLKAPPPPPILGLKTPSK 111
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +3
Query: 777 PPPPPPXXKXKKXPPXXPPXXXXPPXK 857
PPPPPP + P PP P K
Sbjct: 70 PPPPPPLISILQQAPPPPPPPPPPTLK 96
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +3
Query: 726 PPXKXXKXXPXXXPXXXPPPPPPXXKXKKXPPXXPP 833
PP P P PPPP P + P PP
Sbjct: 76 PPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPP 111
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +3
Query: 726 PPXKXXKXXPXXXPXXXPPPPPPXXKXKKXPPXXPP 833
PP P P PPPP P + P PP
Sbjct: 298 PPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPP 333
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 729 PXKXXKXXPXXXPXXXPPPPPPXXKXKKXPPXXPPXXXXPP 851
P P P PPPPPP P P PP
Sbjct: 74 PRPSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPP 114
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical
protein ZC376.8 protein.
Length = 278
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 777 PPPPPPXXKXKKXPPXXPP 833
PPPPPP K + P PP
Sbjct: 52 PPPPPPAPKVPEPPKAPPP 70
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 777 PPPPPPXXKXKKXPPXXPP 833
PPPPPP + PP PP
Sbjct: 41 PPPPPPCGGGYEAPPPPPP 59
>U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical
protein F47B3.4 protein.
Length = 281
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 777 PPPPPPXXKXKKXPPXXPP 833
PPPPPP K + P PP
Sbjct: 53 PPPPPPAPKVPEPPKAPPP 71
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 777 PPPPPPXXKXKKXPPXXPP 833
PPPPPP PP PP
Sbjct: 52 PPPPPPPAPKVPEPPKAPP 70
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -3
Query: 850 GGXXXXGGXXGGXFXXFXXGGGGGGXXKGXXXGXXFXXXXGGXXXXKXXXGGXXXXXWXG 671
GG GG GG GGGGGG G GG GG G
Sbjct: 124 GGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGG 183
Query: 670 G 668
G
Sbjct: 184 G 184
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 28.3 bits (60), Expect = 7.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 777 PPPPPPXXKXKKXPPXXP 830
PPPPPP + ++ PP P
Sbjct: 479 PPPPPPENEPEEFPPPPP 496
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 850 GGXXXXGGXXGGXFXXFXXGGGGGGXXKGXXXG 752
GG GG GG GGGGGG G G
Sbjct: 99 GGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGGG 131
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/62 (32%), Positives = 21/62 (33%)
Frame = -3
Query: 850 GGXXXXGGXXGGXFXXFXXGGGGGGXXKGXXXGXXFXXXXGGXXXXKXXXGGXXXXXWXG 671
GG GG GG GGGGGG G G GG GG G
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGG---GGGCGGGGGGCGGGGGGCGGGGGGGCGG 141
Query: 670 GA 665
G+
Sbjct: 142 GS 143
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/62 (32%), Positives = 21/62 (33%)
Frame = -3
Query: 850 GGXXXXGGXXGGXFXXFXXGGGGGGXXKGXXXGXXFXXXXGGXXXXKXXXGGXXXXXWXG 671
GG GG GG GGGGGG G G GG GG G
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGG---GGGCGGGGGGCGGGGGGCGGGGGGGCGG 141
Query: 670 GA 665
G+
Sbjct: 142 GS 143
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/67 (26%), Positives = 19/67 (28%), Gaps = 4/67 (5%)
Frame = +3
Query: 669 PPXXHXKXXPPX*XXXXXXPPXKXXKXXPXXXPXXXPP----PPPPXXKXKKXPPXXPPX 836
PP K PP PP P PP PPPP PP
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 837 XXXPPXK 857
PP +
Sbjct: 298 PPPPPPR 304
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/67 (26%), Positives = 19/67 (28%), Gaps = 4/67 (5%)
Frame = +3
Query: 669 PPXXHXKXXPPX*XXXXXXPPXKXXKXXPXXXPXXXPP----PPPPXXKXKKXPPXXPPX 836
PP K PP PP P PP PPPP PP
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 837 XXXPPXK 857
PP +
Sbjct: 319 PPPPPPR 325
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/67 (26%), Positives = 19/67 (28%), Gaps = 4/67 (5%)
Frame = +3
Query: 669 PPXXHXKXXPPX*XXXXXXPPXKXXKXXPXXXPXXXPP----PPPPXXKXKKXPPXXPPX 836
PP K PP PP P PP PPPP PP
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 837 XXXPPXK 857
PP +
Sbjct: 304 PPPPPPR 310
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 777 PPPPPPXXKXKKXPPXXPPXXXXPP 851
PPPPPP PP PP P
Sbjct: 578 PPPPPPPMLGGPPPPPPPPGGLMGP 602
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,531,554
Number of Sequences: 27780
Number of extensions: 186934
Number of successful extensions: 2730
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1672
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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