Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_H23
(875 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical pr... 37 0.022
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 32 0.47
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 31 1.1
Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical p... 29 4.4
Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical pr... 29 4.4
AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP ... 29 4.4
>Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical
protein T23D8.2 protein.
Length = 232
Score = 36.7 bits (81), Expect = 0.022
Identities = 25/132 (18%), Positives = 57/132 (43%), Gaps = 7/132 (5%)
Frame = +2
Query: 227 VHLQFADIETVLSETSFRVAPVACMIVXXXXXXXXXXXXXXXXRESNCMLVTYAIFMLVL 406
+ L+F ++ +L + P+ +++ RE+ C+ V++A+ + +L
Sbjct: 34 LQLKFDNVLDILGDERL-ATPILLLVIGSLCTLLGFLGCCGAIRENYCLTVSFAVLLALL 92
Query: 407 MALKLTLGVMVFVNLDGVVAAIPNWMNKTFQQDQDTFHVIE-----HR-FSCCGPTGPGS 568
+ ++ ++ + D I N + + ++ V H+ F CCG T
Sbjct: 93 ITCEIAAVIIGYALHDSFRLGIGNQLQTGMVRYHESRGVESAWDKTHQLFECCGVTNSSD 152
Query: 569 YLSL-TLPITCC 601
+L+ T+P +CC
Sbjct: 153 WLTFTTIPDSCC 164
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 32.3 bits (70), Expect = 0.47
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 403 VDGTETDLGRNGVCESRRSSCCYPELDEQDLP 498
+DG+ D+ +G C +R+S+C DE+ +P
Sbjct: 288 IDGSVIDIAHSGACRARKSTCITCPKDEKKIP 319
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = -2
Query: 490 LVHPVRDSSNYS--VEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEECNDES 317
+VH V+ + S +++H H + F H + V H G E+ +DE+
Sbjct: 498 VVHHVQTEAQQSPVIDVHSTHVVE-HFDTHDESPQSPVLSVHG-----GEEGYEDHHDEA 551
Query: 316 DAPNNHTGHRRHSE 275
+ HT H+ HSE
Sbjct: 552 PVLSVHTDHKAHSE 565
>Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical protein
T01H8.5d protein.
Length = 1931
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/55 (29%), Positives = 34/55 (61%)
Frame = -2
Query: 349 TAASEECNDESDAPNNHTGHRRHSEAGL*QHSLYVSEL*MNRQSEAQQSETCQRK 185
+++ E+ +DE++A N+ R + G Q SL ++ L +R+ +A+++E C R+
Sbjct: 1047 SSSFEDDDDENNAHNHDQKRTRKTSQGSAQ-SLNITSLFHSRRRKAKKNEKCDRE 1100
>Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical protein
T01H8.5c protein.
Length = 1971
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/55 (29%), Positives = 34/55 (61%)
Frame = -2
Query: 349 TAASEECNDESDAPNNHTGHRRHSEAGL*QHSLYVSEL*MNRQSEAQQSETCQRK 185
+++ E+ +DE++A N+ R + G Q SL ++ L +R+ +A+++E C R+
Sbjct: 1087 SSSFEDDDDENNAHNHDQKRTRKTSQGSAQ-SLNITSLFHSRRRKAKKNEKCDRE 1140
>Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical protein
T01H8.5a protein.
Length = 2032
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/55 (29%), Positives = 34/55 (61%)
Frame = -2
Query: 349 TAASEECNDESDAPNNHTGHRRHSEAGL*QHSLYVSEL*MNRQSEAQQSETCQRK 185
+++ E+ +DE++A N+ R + G Q SL ++ L +R+ +A+++E C R+
Sbjct: 1148 SSSFEDDDDENNAHNHDQKRTRKTSQGSAQ-SLNITSLFHSRRRKAKKNEKCDRE 1201
>Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/55 (29%), Positives = 34/55 (61%)
Frame = -2
Query: 349 TAASEECNDESDAPNNHTGHRRHSEAGL*QHSLYVSEL*MNRQSEAQQSETCQRK 185
+++ E+ +DE++A N+ R + G Q SL ++ L +R+ +A+++E C R+
Sbjct: 1047 SSSFEDDDDENNAHNHDQKRTRKTSQGSAQ-SLNITSLFHSRRRKAKKNEKCDRE 1100
>Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical protein
T01H8.5c protein.
Length = 1971
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/55 (29%), Positives = 34/55 (61%)
Frame = -2
Query: 349 TAASEECNDESDAPNNHTGHRRHSEAGL*QHSLYVSEL*MNRQSEAQQSETCQRK 185
+++ E+ +DE++A N+ R + G Q SL ++ L +R+ +A+++E C R+
Sbjct: 1087 SSSFEDDDDENNAHNHDQKRTRKTSQGSAQ-SLNITSLFHSRRRKAKKNEKCDRE 1140
>Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical protein
T01H8.5a protein.
Length = 2032
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/55 (29%), Positives = 34/55 (61%)
Frame = -2
Query: 349 TAASEECNDESDAPNNHTGHRRHSEAGL*QHSLYVSEL*MNRQSEAQQSETCQRK 185
+++ E+ +DE++A N+ R + G Q SL ++ L +R+ +A+++E C R+
Sbjct: 1148 SSSFEDDDDENNAHNHDQKRTRKTSQGSAQ-SLNITSLFHSRRRKAKKNEKCDRE 1201
>AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1971
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/55 (29%), Positives = 34/55 (61%)
Frame = -2
Query: 349 TAASEECNDESDAPNNHTGHRRHSEAGL*QHSLYVSEL*MNRQSEAQQSETCQRK 185
+++ E+ +DE++A N+ R + G Q SL ++ L +R+ +A+++E C R+
Sbjct: 1087 SSSFEDDDDENNAHNHDQKRTRKTSQGSAQ-SLNITSLFHSRRRKAKKNEKCDRE 1140
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,235,423
Number of Sequences: 27780
Number of extensions: 352959
Number of successful extensions: 1019
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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