Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_H21
(867 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14745-11|AAA27919.2| 315|Caenorhabditis elegans Hypothetical p... 92 5e-19
Z81077-14|CAN99679.1| 662|Caenorhabditis elegans Hypothetical p... 57 2e-08
Z81077-2|CAD56583.2| 656|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z81077-1|CAB03066.2| 658|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z81077-15|CAN99680.1| 664|Caenorhabditis elegans Hypothetical p... 55 8e-08
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 32 0.61
AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical... 29 5.7
U00048-5|AAB53832.2| 621|Caenorhabditis elegans Hypothetical pr... 28 7.5
U00048-4|AAM15547.1| 751|Caenorhabditis elegans Hypothetical pr... 28 7.5
U00036-16|AAK29860.1| 233|Caenorhabditis elegans Hypothetical p... 28 7.5
AF143147-1|AAD37862.1| 233|Caenorhabditis elegans R151.8A prote... 28 7.5
AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical ... 28 9.9
>L14745-11|AAA27919.2| 315|Caenorhabditis elegans Hypothetical
protein C02F5.4 protein.
Length = 315
Score = 91.9 bits (218), Expect = 5e-19
Identities = 40/125 (32%), Positives = 74/125 (59%), Gaps = 1/125 (0%)
Frame = +1
Query: 136 MAGFTENALVRKLQDLNSSQQSIQTLSLWLIHHRKHHAAVVKTWLKELLK-AKDSKQLTF 312
MA FTE L +KL +L++ SIQT S WL+ + + +++ WLK + K SK +
Sbjct: 1 MADFTEQTLRQKLTNLSNHPSSIQTTSAWLLQNHSNRELIIRVWLKTVKKETHGSKIVNL 60
Query: 313 MYLANDVIQNSKKKGPEYGKEFGEVLVESFQHMAKTGMESKTKHSLHRILKIWEERGVYD 492
+Y+ANDV QN++K P++ EF + SF+H + + +H++ +++ +W++R ++
Sbjct: 61 LYVANDVSQNARKTCPQFKDEFFPAIESSFRHAIELKNAKEVEHAIGKLINVWKDRQIFT 120
Query: 493 AEKIK 507
+ K
Sbjct: 121 PSQCK 125
>Z81077-14|CAN99679.1| 662|Caenorhabditis elegans Hypothetical
protein F36A2.1c protein.
Length = 662
Score = 56.8 bits (131), Expect = 2e-08
Identities = 36/140 (25%), Positives = 73/140 (52%), Gaps = 9/140 (6%)
Frame = +1
Query: 136 MAGFTENALVRKLQDL-NSSQQSIQTLSLWLIHHRKHHA--AVVKTWLKELLKA-KDSKQ 303
M T + + +LQD+ N +Q++I+T+S+W++H++ + + +V WL A D+K+
Sbjct: 1 MVVLTSDVVYSRLQDVKNPTQEAIETMSMWIMHYKDNASIDLIVDGWLNCFKTAGTDNKR 60
Query: 304 LTFMYLANDVIQNSKKKGPEYGKEFGEVLVESFQHMAKTGM-----ESKTKHSLHRILKI 468
+ Y+ NDV+Q +K K + L+ +FQ T + + K K + R ++I
Sbjct: 61 IALFYVMNDVVQKAKMK-------HADTLIPAFQPAVLTAVGIGRKQDKVKAVMKRCIQI 113
Query: 469 WEERGVYDAEKIKDFKDAIA 528
++ R V+ ++ +A
Sbjct: 114 FKSRNVFSPASTTAMENLLA 133
>Z81077-2|CAD56583.2| 656|Caenorhabditis elegans Hypothetical
protein F36A2.1b protein.
Length = 656
Score = 56.4 bits (130), Expect = 2e-08
Identities = 35/127 (27%), Positives = 69/127 (54%), Gaps = 9/127 (7%)
Frame = +1
Query: 136 MAGFTENALVRKLQDL-NSSQQSIQTLSLWLIHHRKHHA--AVVKTWLKELLKA-KDSKQ 303
M T + + +LQD+ N +Q++I+T+S+W++H++ + + +V WL A D+K+
Sbjct: 1 MVVLTSDVVYSRLQDVKNPTQEAIETMSMWIMHYKDNASIDLIVDGWLNCFKTAGTDNKR 60
Query: 304 LTFMYLANDVIQNSKKKGPEYGKEFGEVLVESFQHMAKTGM-----ESKTKHSLHRILKI 468
+ Y+ NDV+Q +K K + L+ +FQ T + + K K + R ++I
Sbjct: 61 IALFYVMNDVVQKAKMK-------HADTLIPAFQPAVLTAVGIGRKQDKVKAVMKRCIQI 113
Query: 469 WEERGVY 489
++ R V+
Sbjct: 114 FKSRNVF 120
>Z81077-1|CAB03066.2| 658|Caenorhabditis elegans Hypothetical
protein F36A2.1a protein.
Length = 658
Score = 56.4 bits (130), Expect = 2e-08
Identities = 35/127 (27%), Positives = 69/127 (54%), Gaps = 9/127 (7%)
Frame = +1
Query: 136 MAGFTENALVRKLQDL-NSSQQSIQTLSLWLIHHRKHHA--AVVKTWLKELLKA-KDSKQ 303
M T + + +LQD+ N +Q++I+T+S+W++H++ + + +V WL A D+K+
Sbjct: 1 MVVLTSDVVYSRLQDVKNPTQEAIETMSMWIMHYKDNASIDLIVDGWLNCFKTAGTDNKR 60
Query: 304 LTFMYLANDVIQNSKKKGPEYGKEFGEVLVESFQHMAKTGM-----ESKTKHSLHRILKI 468
+ Y+ NDV+Q +K K + L+ +FQ T + + K K + R ++I
Sbjct: 61 IALFYVMNDVVQKAKMK-------HADTLIPAFQPAVLTAVGIGRKQDKVKAVMKRCIQI 113
Query: 469 WEERGVY 489
++ R V+
Sbjct: 114 FKSRNVF 120
>Z81077-15|CAN99680.1| 664|Caenorhabditis elegans Hypothetical
protein F36A2.1d protein.
Length = 664
Score = 54.8 bits (126), Expect = 8e-08
Identities = 36/142 (25%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Frame = +1
Query: 136 MAGFTENALVRKLQDL---NSSQQSIQTLSLWLIHHRKHHA--AVVKTWLKELLKA-KDS 297
M T + + +LQD N +Q++I+T+S+W++H++ + + +V WL A D+
Sbjct: 1 MVVLTSDVVYSRLQDFQVKNPTQEAIETMSMWIMHYKDNASIDLIVDGWLNCFKTAGTDN 60
Query: 298 KQLTFMYLANDVIQNSKKKGPEYGKEFGEVLVESFQHMAKTGM-----ESKTKHSLHRIL 462
K++ Y+ NDV+Q +K K + L+ +FQ T + + K K + R +
Sbjct: 61 KRIALFYVMNDVVQKAKMK-------HADTLIPAFQPAVLTAVGIGRKQDKVKAVMKRCI 113
Query: 463 KIWEERGVYDAEKIKDFKDAIA 528
+I++ R V+ ++ +A
Sbjct: 114 QIFKSRNVFSPASTTAMENLLA 135
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 31.9 bits (69), Expect = 0.61
Identities = 32/156 (20%), Positives = 70/156 (44%), Gaps = 14/156 (8%)
Frame = +1
Query: 172 LQDLNSSQQSIQTLSLWLIHHRKHHAAVVKTWLKELLKAKDS---KQLTFMYLANDVIQN 342
+++L + SI +W I + K+ A + + + + L +D K+++ +YL ND++ N
Sbjct: 534 IRELTPEKTSIAATMVWCIQNAKYAAEICEC-VYDSLTIEDIPLYKKISRLYLINDILSN 592
Query: 343 SKKKGPE----YGKEFGEVLVESFQHMAKT--GMESKTKHSLHR-----ILKIWEERGVY 489
++ Y F +L + F + K + S+ K + + + +EE VY
Sbjct: 593 CVQRNVRDVFLYRSHFEALLEKIFVAVGKAYRAIPSRIKQEQFKQRVMCVFRNFEEMAVY 652
Query: 490 DAEKIKDFKDAIAGIEAPVTPSKVSKRKSTDTELKE 597
+K+ ++ G+ + K +R + E +E
Sbjct: 653 PTDKLIHNQNVFLGL-IEIGKEKSEERDNQKLEEEE 687
>AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical
protein Y53F4B.25 protein.
Length = 603
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 105 NNNQESQIALRYSRITPYCQNLKEF 31
N NQ+ + R RI+P CQNL F
Sbjct: 483 NPNQKLDLCCRKQRISPLCQNLCNF 507
>U00048-5|AAB53832.2| 621|Caenorhabditis elegans Hypothetical
protein C05D11.7a protein.
Length = 621
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = -2
Query: 323 ARYMNVSCLLSLALSNSFSQVLTTA 249
+RY N SCL+++A ++SF VL ++
Sbjct: 422 SRYTNFSCLVAVAETDSFGSVLASS 446
>U00048-4|AAM15547.1| 751|Caenorhabditis elegans Hypothetical
protein C05D11.7b protein.
Length = 751
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = -2
Query: 323 ARYMNVSCLLSLALSNSFSQVLTTA 249
+RY N SCL+++A ++SF VL ++
Sbjct: 440 SRYTNFSCLVAVAETDSFGSVLASS 464
>U00036-16|AAK29860.1| 233|Caenorhabditis elegans Hypothetical
protein R151.10 protein.
Length = 233
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 361 EYGKEFGEVLVESFQHM-AKTGMESKTKHSLH 453
EY +++ E+L+E F+ A G E +H LH
Sbjct: 72 EYSRQYDELLIEMFKRSPAMPGAEKLVRHLLH 103
>AF143147-1|AAD37862.1| 233|Caenorhabditis elegans R151.8A protein
protein.
Length = 233
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 361 EYGKEFGEVLVESFQHM-AKTGMESKTKHSLH 453
EY +++ E+L+E F+ A G E +H LH
Sbjct: 72 EYSRQYDELLIEMFKRSPAMPGAEKLVRHLLH 103
>AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical
protein T10D4.6 protein.
Length = 796
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +1
Query: 472 EERGVYDAEKIKDFKDAIAGIEAPVTPSKVSKRKSTDTELKESTKKHKI 618
E+ G+ +++ + I GIEAP T + S+ + + + E ++HK+
Sbjct: 71 EQAGISQIPQLQHNNEVI-GIEAPTTSAAPSRAQIPEVPVVEHIERHKV 118
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,765,428
Number of Sequences: 27780
Number of extensions: 292497
Number of successful extensions: 807
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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