Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_H20
         (858 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    30   2.7  
06_03_0218 + 18219956-18220555                                         30   2.7  
03_04_0061 - 16949038-16950006                                         30   2.7  
03_06_0486 - 34261577-34261692,34261830-34262094,34263164-342632...    29   3.6  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.3  
01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,467...    29   6.3  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.3  

>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 15/49 (30%), Positives = 20/49 (40%)
 Frame = +1

Query: 517 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPWKAPSCALLFRP 663
           CWR  +        T  D Q    +    +KD    P+  PSC L+F P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIP 331


>06_03_0218 + 18219956-18220555
          Length = 199

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 20/63 (31%), Positives = 26/63 (41%)
 Frame = -2

Query: 797 NGGXVHTAQLGANDLHRXEIPTA*AMRKRHASRREKGGQVSXKRQGRNRRAHEGAFQGKR 618
           NGG     ++ A    +   P     R R   R E  G  + KR+GR R    G  +GKR
Sbjct: 81  NGGLTEGEEVAARPREKTARPDG--ARARRERRLEAAG--AEKREGRRRGGSSGGLRGKR 136

Query: 617 LVS 609
             S
Sbjct: 137 RAS 139


>03_04_0061 - 16949038-16950006
          Length = 322

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 599 RTIKIPGVSPGKLPRALSCSDPAAYXIPVRLSPFGKRGA 715
           RT+K PG+   ++PRA+  + P  Y   VR +   +R A
Sbjct: 255 RTMKGPGLGGARVPRAVFRASPRRYYAAVRTARKARRSA 293


>03_06_0486 -
           34261577-34261692,34261830-34262094,34263164-34263277,
           34263371-34264795
          Length = 639

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = +3

Query: 612 YQAFPLESSLVRSPVPTLPLTGYLSAFLPSGSVALSHSSR 731
           +Q+ PL+++L+  P+P    +G +   +P+   +LSH  R
Sbjct: 152 FQSGPLDAALLSGPLPGTATSGRMGGAVPALRRSLSHGGR 191


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 349 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 504
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,
            4675953-4676072,4676185-4676313,4676394-4676442,
            4676899-4676970,4677574-4677707,4677798-4677915,
            4678332-4678541,4678630-4678942,4679539-4679632,
            4679854-4679962,4680243-4680514,4680597-4680724,
            4680832-4681066,4681570-4681758,4681845-4682128,
            4682218-4682398,4682486-4682728,4682904-4682986,
            4683119-4683227,4687996-4688091,4688675-4688764,
            4688881-4689129,4689233-4689412,4690179-4690250,
            4691385-4691474,4691605-4691705,4691794-4691959
          Length = 1757

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 17/62 (27%), Positives = 23/62 (37%)
 Frame = +1

Query: 469  CEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPWKAPSCA 648
            C Q  S+    V    CW   + S  L    KI A  + G+ +  Y  +    WK    A
Sbjct: 1564 CVQTLSEHKAAVTSVLCWDEKLLSCSLDKTVKIWAASKSGDLQVIYTHSEEHGWKRAEPA 1623

Query: 649  LL 654
             L
Sbjct: 1624 RL 1625


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 298 NESAN---ARGEAVCVLGALPLPRSLTRCAR 381
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,983,058
Number of Sequences: 37544
Number of extensions: 467387
Number of successful extensions: 1320
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)