Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_H19
(847 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein. 137 1e-32
AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess... 137 1e-32
AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess... 137 1e-32
Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr... 36 0.027
U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical pr... 33 0.34
U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical pr... 33 0.34
U41272-9|AAA82452.4| 1256|Caenorhabditis elegans Prion-like-(q/n... 32 0.59
U80444-6|AAO12449.1| 93|Caenorhabditis elegans Hypothetical pr... 29 5.5
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 29 5.5
AL110500-12|CAB60432.1| 362|Caenorhabditis elegans Hypothetical... 29 5.5
AF038604-1|AAB92011.4| 436|Caenorhabditis elegans Hypothetical ... 29 5.5
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z82083-2|CAB04970.1| 263|Caenorhabditis elegans Hypothetical pr... 28 9.6
>U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein.
Length = 415
Score = 137 bits (331), Expect = 1e-32
Identities = 75/124 (60%), Positives = 89/124 (71%), Gaps = 1/124 (0%)
Frame = +1
Query: 250 EDQRAFKLALELSMLSLGDNLPASNPLGSPLGFAPPPDDRTKKS-QNMTECVPVPSSEHV 426
E+Q A+KL ++ + +P+ P A + RT QN+TE V VP+SEHV
Sbjct: 3 EEQIAYKLP---GAWYYEEDTASCSPVSDPEDIAQFLNYRTSIGVQNVTESVEVPTSEHV 59
Query: 427 AEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVARAKREILSAAEHFSXIR 606
AEIVGRQGCKIKALRAKTNTYIKTPVRGE+P+FVVTGR EDV AKREI AAEHF+ IR
Sbjct: 60 AEIVGRQGCKIKALRAKTNTYIKTPVRGEDPIFVVTGRLEDVNEAKREIDCAAEHFTQIR 119
Query: 607 ASRK 618
ASR+
Sbjct: 120 ASRR 123
Score = 49.2 bits (112), Expect = 4e-06
Identities = 28/62 (45%), Positives = 37/62 (59%)
Frame = +1
Query: 388 MTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVARAKR 567
+T V VP V +VG +G IK ++ T+TYI TP R EPVF VTG +V A++
Sbjct: 137 ITSYVRVPLRV-VGLVVGPKGATIKRIQQDTHTYIITPSREREPVFEVTGLPHNVEAARK 195
Query: 568 EI 573
EI
Sbjct: 196 EI 197
>AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess
protein 3, isoform a protein.
Length = 415
Score = 137 bits (331), Expect = 1e-32
Identities = 75/124 (60%), Positives = 89/124 (71%), Gaps = 1/124 (0%)
Frame = +1
Query: 250 EDQRAFKLALELSMLSLGDNLPASNPLGSPLGFAPPPDDRTKKS-QNMTECVPVPSSEHV 426
E+Q A+KL ++ + +P+ P A + RT QN+TE V VP+SEHV
Sbjct: 3 EEQIAYKLP---GAWYYEEDTASCSPVSDPEDIAQFLNYRTSIGVQNVTESVEVPTSEHV 59
Query: 427 AEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVARAKREILSAAEHFSXIR 606
AEIVGRQGCKIKALRAKTNTYIKTPVRGE+P+FVVTGR EDV AKREI AAEHF+ IR
Sbjct: 60 AEIVGRQGCKIKALRAKTNTYIKTPVRGEDPIFVVTGRLEDVNEAKREIDCAAEHFTQIR 119
Query: 607 ASRK 618
ASR+
Sbjct: 120 ASRR 123
Score = 49.2 bits (112), Expect = 4e-06
Identities = 28/62 (45%), Positives = 37/62 (59%)
Frame = +1
Query: 388 MTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVARAKR 567
+T V VP V +VG +G IK ++ T+TYI TP R EPVF VTG +V A++
Sbjct: 137 ITSYVRVPLRV-VGLVVGPKGATIKRIQQDTHTYIITPSREREPVFEVTGLPHNVEAARK 195
Query: 568 EI 573
EI
Sbjct: 196 EI 197
>AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess
protein 3, isoform b protein.
Length = 443
Score = 137 bits (331), Expect = 1e-32
Identities = 75/124 (60%), Positives = 89/124 (71%), Gaps = 1/124 (0%)
Frame = +1
Query: 250 EDQRAFKLALELSMLSLGDNLPASNPLGSPLGFAPPPDDRTKKS-QNMTECVPVPSSEHV 426
E+Q A+KL ++ + +P+ P A + RT QN+TE V VP+SEHV
Sbjct: 34 EEQIAYKLP---GAWYYEEDTASCSPVSDPEDIAQFLNYRTSIGVQNVTESVEVPTSEHV 90
Query: 427 AEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVARAKREILSAAEHFSXIR 606
AEIVGRQGCKIKALRAKTNTYIKTPVRGE+P+FVVTGR EDV AKREI AAEHF+ IR
Sbjct: 91 AEIVGRQGCKIKALRAKTNTYIKTPVRGEDPIFVVTGRLEDVNEAKREIDCAAEHFTQIR 150
Query: 607 ASRK 618
ASR+
Sbjct: 151 ASRR 154
Score = 49.2 bits (112), Expect = 4e-06
Identities = 28/62 (45%), Positives = 37/62 (59%)
Frame = +1
Query: 388 MTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVARAKR 567
+T V VP V +VG +G IK ++ T+TYI TP R EPVF VTG +V A++
Sbjct: 165 ITSYVRVPLRV-VGLVVGPKGATIKRIQQDTHTYIITPSREREPVFEVTGLPHNVEAARK 223
Query: 568 EI 573
EI
Sbjct: 224 EI 225
>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical
protein C08H9.2 protein.
Length = 1220
Score = 36.3 bits (80), Expect = 0.027
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +1
Query: 376 KSQNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRG--EEPVFVVTGRKED 549
K +N E E ++G+ G KI LR N + P G E+ + G+KED
Sbjct: 706 KEENYVEDTVKAKPEFHRFLIGKGGSKIAKLRDTLNVRVMFPKEGDAEKETIHLLGKKED 765
Query: 550 VARAKREILSAAEHFS 597
V +AK + A + S
Sbjct: 766 VPKAKAALEDAIKQLS 781
>U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical
protein F26B1.2c protein.
Length = 380
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 412 SSEHVAEIVGRQGCKIKALRAKTNTYIKTP-VRGEEPVFVVTGRKEDVARAKREILSAAE 588
SS+ I+G+ G IK LRA+ N +++ P E V VT ++ V +++L E
Sbjct: 40 SSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDVLPRLE 99
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 421 HVAEIVGRQGCKIKALRAKTNTYIK 495
H ++GR G KIK LR K + +K
Sbjct: 118 HAGALIGRNGSKIKELREKCSARLK 142
>U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical
protein F26B1.2a protein.
Length = 397
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 412 SSEHVAEIVGRQGCKIKALRAKTNTYIKTP-VRGEEPVFVVTGRKEDVARAKREILSAAE 588
SS+ I+G+ G IK LRA+ N +++ P E V VT ++ V +++L E
Sbjct: 57 SSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDVLPRLE 116
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 421 HVAEIVGRQGCKIKALRAKTNTYIK 495
H ++GR G KIK LR K + +K
Sbjct: 135 HAGALIGRNGSKIKELREKCSARLK 159
>U41272-9|AAA82452.4| 1256|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 62
protein.
Length = 1256
Score = 31.9 bits (69), Expect = 0.59
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +1
Query: 352 PPPDDRTKKSQN--MTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPV 504
PPP++ + QN MTE +P S+EHV++ +Q + + + I+TPV
Sbjct: 613 PPPENSQLQFQNFGMTETIPQQSNEHVSQ-QQQQIAQSRPMNLNQQQVIETPV 664
>U80444-6|AAO12449.1| 93|Caenorhabditis elegans Hypothetical
protein F26B1.2e protein.
Length = 93
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 412 SSEHVAEIVGRQGCKIKALRAKTNTYIKTP 501
SS+ I+G+ G IK LRA+ N +++ P
Sbjct: 57 SSKSAGAIIGKGGENIKRLRAEFNAHVQVP 86
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/77 (24%), Positives = 31/77 (40%)
Frame = +1
Query: 454 KIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVARAKREILSAAEHFSXIRASRKCGSAP 633
K + LR+++ + K+P R +G + R R S + S + + S P
Sbjct: 296 KRRYLRSRSRSLSKSPARRRSRHLSRSGSRTPAQRHSRRSESTSRRRSGRHSRSRSRSPP 355
Query: 634 RRPPARPDTSPXRCACP 684
R+ P R S R P
Sbjct: 356 RKRPVRRSRSRSRSRTP 372
>AL110500-12|CAB60432.1| 362|Caenorhabditis elegans Hypothetical
protein Y87G2A.11 protein.
Length = 362
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
Frame = -3
Query: 467 KALILHPCRPTISATCSEDGT---GTHSV 390
+A+ HP + TI ATC+ D + GTHS+
Sbjct: 67 RAIAAHPTKSTILATCTADFSSLGGTHSI 95
>AF038604-1|AAB92011.4| 436|Caenorhabditis elegans Hypothetical
protein B0546.2 protein.
Length = 436
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +1
Query: 541 KEDVARAKREILSAAEHFSXIRASRKCGSAPRRPPARPDTSPXRCACPTASSGWSSD 711
+ED +KR +LSA+ S S S+P PP +P+ P R P ++ ++SD
Sbjct: 55 QEDGPPSKRWVLSASST-SSTNKSPIPSSSPVLPPPQPEIEPNRSQSP-GNADYNSD 109
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +1
Query: 400 VPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVARAKREILS 579
+P P+ E V + V R I + Y +P PVF T R ++ K L
Sbjct: 419 IPTPAPEIVEQFVQRNPGMIGSFGNTNIQYPTSPRATPSPVFTTTTRGLTTSQQKLPTLI 478
Query: 580 AAEHFS-XIRASRKCGS 627
+H ++ + CGS
Sbjct: 479 PEQHCEHPLKNYQSCGS 495
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +1
Query: 400 VPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVARAKREILS 579
+P P+ E V + V R I + Y +P PVF T R ++ K L
Sbjct: 210 IPTPAPEIVEQFVQRNPGMIGSFGNTNIQYPTSPRATPSPVFTTTTRGLTTSQQKLPTLI 269
Query: 580 AAEHFS-XIRASRKCGS 627
+H ++ + CGS
Sbjct: 270 PEQHCEHPLKNYQSCGS 286
>Z82083-2|CAB04970.1| 263|Caenorhabditis elegans Hypothetical
protein ZK1010.4 protein.
Length = 263
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/19 (57%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = -1
Query: 340 AGSPA-GCSPASCRPGSAC 287
A PA CSP+SC+PG +C
Sbjct: 33 AAPPAVSCSPSSCQPGYSC 51
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,074,747
Number of Sequences: 27780
Number of extensions: 274545
Number of successful extensions: 1017
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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