Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_H18
         (890 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1136 + 24218601-24218734,24218769-24219906                       29   6.6  
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415...    28   8.7  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    28   8.7  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           28   8.7  

>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = +1

Query: 802 GGGGVXXXPXEGVXXPPQXAGGGGPXXSP 888
           GGGG       G   PP   GGGGP   P
Sbjct: 93  GGGGAPGPLGGGGARPPGGGGGGGPPSLP 121


>07_03_0329 +
           16840051-16840917,16840999-16841342,16841444-16841574,
           16841671-16841792,16841877-16841983,16842104-16842236,
           16842342-16842458,16842560-16842667,16842716-16842742,
           16842759-16842830,16843462-16843584,16843671-16843833,
           16844140-16844264,16844355-16844489,16844574-16844677,
           16844772-16844834,16844930-16844993,16845186-16845318,
           16845414-16845487,16845603-16845697,16845799-16845830,
           16846201-16846355
          Length = 1097

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = +3

Query: 804 RGGGXXXPPGGGXXPXPXGGXGGTXG 881
           RGGG     GGG  P   GG GG  G
Sbjct: 55  RGGGYGGGGGGGGPPYYGGGGGGGGG 80


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = -1

Query: 872  PPPPAXW-GGXXTPSXGXXXTPPPP 801
            PPPPA + GG   P+      PPPP
Sbjct: 1163 PPPPAGFRGGTPPPNAHGGVAPPPP 1187



 Score = 28.3 bits (60), Expect = 8.7
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +3

Query: 810  GGXXXPPGGGXXPXPXGGXG 869
            GG   PPGG   P P GG G
Sbjct: 1215 GGPPPPPGGRGLPAPPGGRG 1234


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/53 (32%), Positives = 19/53 (35%)
 Frame = -1

Query: 872 PPPPAXWGGXXTPSXGXXXTPPPPKKXXXWXKXXFSPX*XGPKKXKGAPNFSK 714
           PPPPA       P  G    PPPP            P   G  + +G P F K
Sbjct: 352 PPPPAAPAAPRPPGPGPG-PPPPPGAAGRGGGGPPPPALPGGPRARGPPPFKK 403


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,091,034
Number of Sequences: 37544
Number of extensions: 245833
Number of successful extensions: 1212
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)