Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_H18
         (890 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   5.4  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   5.4  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = -3

Query: 681 GXPXPPXXFFXXGAXXPPXKGKPPP 607
           G P P    F  G   PP    PPP
Sbjct: 767 GMPSPSRSAFADGIGSPPPPPPPPP 791


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
 Frame = -1

Query: 887 GLXXGPPPPAXWG-GXXTPSXGXXXTPPPP 801
           GL   P PPA        PS G    PPPP
Sbjct: 594 GLPQVPQPPAGSSLNLSHPSAGMVPQPPPP 623



 Score = 23.8 bits (49), Expect = 7.1
 Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 4/26 (15%)
 Frame = +3

Query: 807 GGGXXXPPGGG----XXPXPXGGXGG 872
           GG     PGGG      P P GG GG
Sbjct: 205 GGSGGGAPGGGGGSSGGPGPGGGGGG 230



 Score = 23.4 bits (48), Expect = 9.4
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
 Frame = +3

Query: 807 GGGXXXPPGGGXX---PXPXGGXGGTXGKSK 890
           G G   P GGG     P P GG GG  G+ +
Sbjct: 206 GSGGGAPGGGGGSSGGPGPGGGGGG-GGRDR 235


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 412,416
Number of Sequences: 2352
Number of extensions: 5227
Number of successful extensions: 14
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)