Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_H18
         (890 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL445209-3|CAI15184.1|  419|Homo sapiens POU domain, class 4, tr...    31   7.4  

>AL445209-3|CAI15184.1|  419|Homo sapiens POU domain, class 4,
           transcription factor 1 protein.
          Length = 419

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = +3

Query: 807 GGGXXXPPGGGXXPXPXGGXGGTXG 881
           GGG    PGGG    P GG GG  G
Sbjct: 156 GGGPGGGPGGGGGGGPGGGGGGPGG 180



 Score = 30.3 bits (65), Expect = 9.8
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = +3

Query: 807 GGGXXXPPGGGXXPXPXGGXGGTXG 881
           GGG    PGGG  P   GG GG  G
Sbjct: 140 GGGAHDGPGGGGGPGGGGGPGGGPG 164


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,748,416
Number of Sequences: 237096
Number of extensions: 1342096
Number of successful extensions: 3797
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3524
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)