Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_H16
         (871 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3572|AAS65091.1|  171|Drosophila melanogaster CG33290-P...    56   5e-08
AE014296-3612|AAF51775.1|  190|Drosophila melanogaster CG14567-P...    49   7e-06
BT003178-1|AAO24933.1|  476|Drosophila melanogaster RH09265p pro...    29   8.3  
AY058534-1|AAL13763.1|  497|Drosophila melanogaster LD23951p pro...    29   8.3  
AE014297-2712|AAF55702.2|  497|Drosophila melanogaster CG4662-PA...    29   8.3  
AE014297-2711|AAN13811.1|  479|Drosophila melanogaster CG4662-PB...    29   8.3  

>AE014296-3572|AAS65091.1|  171|Drosophila melanogaster CG33290-PA
           protein.
          Length = 171

 Score = 56.4 bits (130), Expect = 5e-08
 Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
 Frame = +2

Query: 257 EDEEAPIEVRGDGNLINRLNSLPIENQPFWYLNWKAYEALRKRPQ----TFQQRPNNF 418
           ++   PI+ RGD + +NRL  LP++ QPFW +N++A EA+R  P+     ++ R N+F
Sbjct: 112 DNSRLPIDARGDRDWVNRLKQLPVDQQPFWLVNYQAIEAMRNNPRPNVGNYEWRGNSF 169


>AE014296-3612|AAF51775.1|  190|Drosophila melanogaster CG14567-PA
           protein.
          Length = 190

 Score = 49.2 bits (112), Expect = 7e-06
 Identities = 18/38 (47%), Positives = 27/38 (71%)
 Frame = +2

Query: 266 EAPIEVRGDGNLINRLNSLPIENQPFWYLNWKAYEALR 379
           + PI+  GD   +N L+ LP+E QPFW++N++A EA R
Sbjct: 134 QLPIDAHGDREWVNHLSQLPVEQQPFWFINYQAIEAHR 171


>BT003178-1|AAO24933.1|  476|Drosophila melanogaster RH09265p
           protein.
          Length = 476

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = +3

Query: 378 EKDPKPSSKDQTILSIEINKGKKKTQALK--IMRRLQQILQQCLMFEFQYFFFSEWQARP 551
           E++P+P  K + + S E++K K+ T ALK    R  + +  + ++   +Y F      +P
Sbjct: 129 EQEPRPRLKRRQLSSDEVDKYKENTPALKKGSTRLFRNLRDKGIVSYTEYLFLLSILTKP 188

Query: 552 HS 557
            S
Sbjct: 189 KS 190


>AY058534-1|AAL13763.1|  497|Drosophila melanogaster LD23951p
           protein.
          Length = 497

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = +3

Query: 378 EKDPKPSSKDQTILSIEINKGKKKTQALK--IMRRLQQILQQCLMFEFQYFFFSEWQARP 551
           E++P+P  K + + S E++K K+ T ALK    R  + +  + ++   +Y F      +P
Sbjct: 129 EQEPRPRLKRRQLSSDEVDKYKENTPALKKGSTRLFRNLRDKGIVSYTEYLFLLSILTKP 188

Query: 552 HS 557
            S
Sbjct: 189 KS 190


>AE014297-2712|AAF55702.2|  497|Drosophila melanogaster CG4662-PA,
           isoform A protein.
          Length = 497

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = +3

Query: 378 EKDPKPSSKDQTILSIEINKGKKKTQALK--IMRRLQQILQQCLMFEFQYFFFSEWQARP 551
           E++P+P  K + + S E++K K+ T ALK    R  + +  + ++   +Y F      +P
Sbjct: 129 EQEPRPRLKRRQLSSDEVDKYKENTPALKKGSTRLFRNLRDKGIVSYTEYLFLLSILTKP 188

Query: 552 HS 557
            S
Sbjct: 189 KS 190


>AE014297-2711|AAN13811.1|  479|Drosophila melanogaster CG4662-PB,
           isoform B protein.
          Length = 479

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = +3

Query: 378 EKDPKPSSKDQTILSIEINKGKKKTQALK--IMRRLQQILQQCLMFEFQYFFFSEWQARP 551
           E++P+P  K + + S E++K K+ T ALK    R  + +  + ++   +Y F      +P
Sbjct: 129 EQEPRPRLKRRQLSSDEVDKYKENTPALKKGSTRLFRNLRDKGIVSYTEYLFLLSILTKP 188

Query: 552 HS 557
            S
Sbjct: 189 KS 190


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,647,287
Number of Sequences: 53049
Number of extensions: 683206
Number of successful extensions: 1962
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1962
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)