Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_H11
         (891 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   6.5  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    22   8.6  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    22   8.6  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 89  GGHGSMFRQLLKKKANLKE 33
           G   +MF Q+LKK  N K+
Sbjct: 61  GSPDAMFSQVLKKAENFKD 79


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 213 MDKYHPGYFGKLGMRNFHFXKEQEFLSSFE 302
           M  Y P   G L +   HF + QE L +F+
Sbjct: 136 MHDYPPLVSGALHLLFRHFSQRQEVLQAFK 165


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 213 MDKYHPGYFGKLGMRNFHFXKEQEFLSSFE 302
           M  Y P   G L +   HF + QE L +F+
Sbjct: 104 MHDYPPLVSGALHLLFRHFSQRQEVLQAFK 133


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,697
Number of Sequences: 438
Number of extensions: 3652
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)